RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 CEP295Q9C0D2 2601 aa8.89□□□□□ -0.99
GPC4-201ENST00000370828 SPINK6Q6UWN8 80 aa8.89□□□□□ -0.99
GPC4-201ENST00000370828 EGFEM1PQ0D2K5 195 aa8.88□□□□□ -0.99
GPC4-201ENST00000370828 LOC101927531A0A1B0GV80 90 aa8.88□□□□□ -0.99
GPC4-201ENST00000370828 Q6ZQT0 140 aa8.88□□□□□ -0.99
GPC4-201ENST00000370828 C11orf45Q8TAV5 145 aa8.88□□□□□ -0.99
GPC4-201ENST00000370828 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.87□□□□□ -0.99
GPC4-201ENST00000370828 A0A1B0GU69 56 aa8.87□□□□□ -0.99
GPC4-201ENST00000370828 C10orf25Q5T742 122 aa8.87□□□□□ -0.99
GPC4-201ENST00000370828 DEFB131BA0A096LNP1 70 aa8.87□□□□□ -0.99
GPC4-201ENST00000370828 C11orf72Q8NBR9 251 aa8.87□□□□□ -0.99
GPC4-201ENST00000370828 KPRPQ5T749 579 aaPredicted RBP8.86□□□□□ -0.99
GPC4-201ENST00000370828 A0A1W2PPR1 153 aa8.86□□□□□ -0.99
GPC4-201ENST00000370828 A0A087WSZ3 146 aa8.86□□□□□ -0.99
GPC4-201ENST00000370828 H3BPC8 53 aa8.86□□□□□ -0.99
GPC4-201ENST00000370828 LINC01554Q52M75 96 aa8.86□□□□□ -0.99
GPC4-201ENST00000370828 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.85□□□□□ -0.99
GPC4-201ENST00000370828 MUC4Q99102 2169 aa8.85□□□□□ -0.99
GPC4-201ENST00000370828 JMJD1CQ15652 2540 aa8.85□□□□□ -0.99
GPC4-201ENST00000370828 A0A1B0GUV1 79 aa8.84□□□□□ -0.99
GPC4-201ENST00000370828 C1orf64Q8NEQ6 169 aa8.83□□□□□ -1
GPC4-201ENST00000370828 IGLV9-49A0A0B4J1Y8 123 aa8.81□□□□□ -1
GPC4-201ENST00000370828 Q6ZRU5 148 aa8.8□□□□□ -1
GPC4-201ENST00000370828 CDC42SE1Q9NRR8 79 aa8.8□□□□□ -1
GPC4-201ENST00000370828 KIAA0087Q14695 138 aa8.8□□□□□ -1
GPC4-201ENST00000370828 BPTFQ12830 3046 aa8.8□□□□□ -1
GPC4-201ENST00000370828 LOC110117498A0A087WWA1 95 aa8.79□□□□□ -1
GPC4-201ENST00000370828 ELOF1P60002 83 aaKnown RBP8.79□□□□□ -1
GPC4-201ENST00000370828 ANKRD11Q6UB99 2663 aaPredicted RBP8.78□□□□□ -1
GPC4-201ENST00000370828 Q1T7F1 81 aa8.78□□□□□ -1
GPC4-201ENST00000370828 C14orf177Q52M58 125 aa8.76□□□□□ -1.01
GPC4-201ENST00000370828 C9orf129Q5T035 196 aaKnown RBP8.76□□□□□ -1.01
GPC4-201ENST00000370828 ZFYVE26Q68DK2 2539 aa8.75□□□□□ -1.01
GPC4-201ENST00000370828 MTORP42345 2549 aa8.75□□□□□ -1.01
GPC4-201ENST00000370828 IGHV6-1A0A0B4J1U7 121 aa8.75□□□□□ -1.01
GPC4-201ENST00000370828 REG3GQ6UW15 175 aa8.75□□□□□ -1.01
GPC4-201ENST00000370828 FSHBP01225 129 aa8.74□□□□□ -1.01
GPC4-201ENST00000370828 IGLV1-51P01701 117 aa8.74□□□□□ -1.01
GPC4-201ENST00000370828 Q9BRP9 147 aa8.74□□□□□ -1.01
GPC4-201ENST00000370828 A0A1B0GW54 56 aa8.72□□□□□ -1.01
GPC4-201ENST00000370828 ACYP2P14621 99 aa8.71□□□□□ -1.02
GPC4-201ENST00000370828 C6orf48Q9UBA6 75 aa8.7□□□□□ -1.02
GPC4-201ENST00000370828 COA5Q86WW8 74 aa8.7□□□□□ -1.02
GPC4-201ENST00000370828 PRLHP81277 87 aa8.69□□□□□ -1.02
GPC4-201ENST00000370828 POLQO75417 2590 aa8.69□□□□□ -1.02
GPC4-201ENST00000370828 UQCR11O14957 56 aa8.69□□□□□ -1.02
GPC4-201ENST00000370828 C7orf33Q8WU49 177 aa8.68□□□□□ -1.02
GPC4-201ENST00000370828 F8P00451 2351 aa8.68□□□□□ -1.02
GPC4-201ENST00000370828 FP248Q71RG6 208 aaPredicted RBP8.68□□□□□ -1.02
GPC4-201ENST00000370828 Q6ZTC4 211 aa8.67□□□□□ -1.02
GPC4-201ENST00000370828 SSBP3-AS1Q7Z2R9 100 aa8.66□□□□□ -1.02
GPC4-201ENST00000370828 LYPD5Q6UWN5 251 aa8.66□□□□□ -1.02
GPC4-201ENST00000370828 Q8NBF4 154 aa8.65□□□□□ -1.02
GPC4-201ENST00000370828 TP53AIP1Q9HCN2 124 aa8.65□□□□□ -1.02
GPC4-201ENST00000370828 LY6G6DO95868 133 aa8.65□□□□□ -1.03
GPC4-201ENST00000370828 SPINK1P00995 79 aa8.64□□□□□ -1.03
GPC4-201ENST00000370828 SPTBN4Q9H254 2564 aa8.64□□□□□ -1.03
GPC4-201ENST00000370828 C22orf24Q9Y442 160 aa8.64□□□□□ -1.03
GPC4-201ENST00000370828 ZNF575Q86XF7 245 aa8.62□□□□□ -1.03
GPC4-201ENST00000370828 LINC01600Q96MT4 127 aa8.62□□□□□ -1.03
GPC4-201ENST00000370828 FASNP49327 2511 aaKnown RBP8.62□□□□□ -1.03
GPC4-201ENST00000370828 MIR22HGQ0VDD5 57 aa8.62□□□□□ -1.03
GPC4-201ENST00000370828 RPL37AP61513 92 aaKnown RBP8.62□□□□□ -1.03
GPC4-201ENST00000370828 LINC00588Q9Y4M8 146 aa8.62□□□□□ -1.03
GPC4-201ENST00000370828 TRBV7-4A0A0J9YYF1 115 aa8.61□□□□□ -1.03
GPC4-201ENST00000370828 INAFM1C9JVW0 142 aa8.61□□□□□ -1.03
GPC4-201ENST00000370828 ST20-AS1Q8NBB2 130 aa8.61□□□□□ -1.03
GPC4-201ENST00000370828 CYSTM1Q9H1C7 97 aa8.61□□□□□ -1.03
GPC4-201ENST00000370828 K7EQZ3 153 aa8.61□□□□□ -1.03
GPC4-201ENST00000370828 LINC00167Q96N53 147 aa8.6□□□□□ -1.03
GPC4-201ENST00000370828 C5orf42Q9H799 3197 aa8.6□□□□□ -1.03
GPC4-201ENST00000370828 IGLV6-57P01721 117 aa8.59□□□□□ -1.03
GPC4-201ENST00000370828 KLK9Q2XQG4 91 aa8.59□□□□□ -1.03
GPC4-201ENST00000370828 LINC00476Q8WZB0 136 aa8.59□□□□□ -1.03
GPC4-201ENST00000370828 LRRK2Q5S007 2527 aa8.59□□□□□ -1.03
GPC4-201ENST00000370828 COL27A1Q8IZC6 1860 aaPredicted RBP8.59□□□□□ -1.03
GPC4-201ENST00000370828 KRTAP10-9P60411 292 aa8.59□□□□□ -1.03
GPC4-201ENST00000370828 M0R2N4 97 aa8.58□□□□□ -1.04
GPC4-201ENST00000370828 COL4A2P08572 1712 aa8.58□□□□□ -1.04
GPC4-201ENST00000370828 CIRBP-AS1Q8TBR5 109 aa8.57□□□□□ -1.04
GPC4-201ENST00000370828 BRCA2P51587 3418 aa8.56□□□□□ -1.04
GPC4-201ENST00000370828 CFAP54Q96N23 3096 aa8.56□□□□□ -1.04
GPC4-201ENST00000370828 Q6ZRX8 168 aa8.55□□□□□ -1.04
GPC4-201ENST00000370828 Q75L30 129 aa8.55□□□□□ -1.04
GPC4-201ENST00000370828 LAMA2P24043 3122 aaKnown RBP8.55□□□□□ -1.04
GPC4-201ENST00000370828 C1orf134Q5TEV5 83 aa8.55□□□□□ -1.04
GPC4-201ENST00000370828 OXTP01178 125 aa8.54□□□□□ -1.04
GPC4-201ENST00000370828 ACANP16112 2415 aa8.54□□□□□ -1.04
GPC4-201ENST00000370828 SPANXA2-OT1Q8N9U9 137 aa8.53□□□□□ -1.04
GPC4-201ENST00000370828 MKI67P46013 3256 aaKnown RBP8.52□□□□□ -1.04
GPC4-201ENST00000370828 LAMA3Q16787 3333 aa8.52□□□□□ -1.05
GPC4-201ENST00000370828 PCSK5Q92824 1860 aa8.52□□□□□ -1.05
GPC4-201ENST00000370828 LINC00313P59037 77 aa8.52□□□□□ -1.05
GPC4-201ENST00000370828 OBSCN-AS1Q96MR7 158 aa8.51□□□□□ -1.05
GPC4-201ENST00000370828 PHF5AQ7RTV0 110 aaKnown RBP8.5□□□□□ -1.05
GPC4-201ENST00000370828 PRAC1Q96KF2 57 aa8.5□□□□□ -1.05
GPC4-201ENST00000370828 LINC00528Q8N1L1 170 aa8.5□□□□□ -1.05
GPC4-201ENST00000370828 SMR3AQ99954 134 aa8.5□□□□□ -1.05
GPC4-201ENST00000370828 LINC01556Q5JQF7 62 aa8.49□□□□□ -1.05
GPC4-201ENST00000370828 X6R8D5 127 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms