RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 KMT2AQ03164 3969 aa2.53□□□□□ -2
MCF2-203ENST00000370576 IGLV1-50A0A075B6I6 118 aa2.53□□□□□ -2
MCF2-203ENST00000370576 hADV29S1A0JD25 119 aa2.53□□□□□ -2
MCF2-203ENST00000370576 H7BZZ5 65 aa2.53□□□□□ -2
MCF2-203ENST00000370576 TSPEAR-AS2P59090 65 aa2.53□□□□□ -2
MCF2-203ENST00000370576 BAGE3Q86Y29 109 aa2.53□□□□□ -2
MCF2-203ENST00000370576 MEGF8Q7Z7M0 2845 aa2.53□□□□□ -2
MCF2-203ENST00000370576 TRBV7-3A0A075B6L6 115 aa2.53□□□□□ -2.01
MCF2-203ENST00000370576 LECT2O14960 151 aa2.53□□□□□ -2.01
MCF2-203ENST00000370576 DEFB136Q30KP8 78 aa2.53□□□□□ -2.01
MCF2-203ENST00000370576 SPCS1Q9Y6A9 102 aa2.53□□□□□ -2.01
MCF2-203ENST00000370576 CENPEQ02224 2701 aa2.52□□□□□ -2.01
MCF2-203ENST00000370576 TMEM223A0PJW6 202 aa2.52□□□□□ -2.01
MCF2-203ENST00000370576 UBE2D1P51668 147 aa2.52□□□□□ -2.01
MCF2-203ENST00000370576 C2orf66Q6UXQ4 117 aa2.52□□□□□ -2.01
MCF2-203ENST00000370576 LINC00269Q8N2A0 174 aa2.52□□□□□ -2.01
MCF2-203ENST00000370576 PPDPFLQ8WWR9 84 aa2.52□□□□□ -2.01
MCF2-203ENST00000370576 DNAH5Q8TE73 4624 aa2.52□□□□□ -2.01
MCF2-203ENST00000370576 FAT3Q8TDW7 4589 aa2.52□□□□□ -2.01
MCF2-203ENST00000370576 SDHAF1A6NFY7 115 aa2.52□□□□□ -2.01
MCF2-203ENST00000370576 C16orf90A8MZG2 172 aa2.52□□□□□ -2.01
MCF2-203ENST00000370576 I3L3M4 83 aa2.52□□□□□ -2.01
MCF2-203ENST00000370576 BPY2O14599 106 aa2.52□□□□□ -2.01
MCF2-203ENST00000370576 PLNP26678 52 aa2.52□□□□□ -2.01
MCF2-203ENST00000370576 DEFB131AP59861 70 aa2.52□□□□□ -2.01
MCF2-203ENST00000370576 DEFB1P60022 68 aa2.52□□□□□ -2.01
MCF2-203ENST00000370576 MUC7Q8TAX7 377 aa2.52□□□□□ -2.01
MCF2-203ENST00000370576 XAGE1AQ9HD64 81 aa2.52□□□□□ -2.01
MCF2-203ENST00000370576 CCDC168Q8NDH2 2452 aa2.52□□□□□ -2.01
MCF2-203ENST00000370576 A8MU10 97 aa2.52□□□□□ -2.01
MCF2-203ENST00000370576 TLX1NBP0CAT3 122 aa2.52□□□□□ -2.01
MCF2-203ENST00000370576 ROMO1P60602 79 aa2.52□□□□□ -2.01
MCF2-203ENST00000370576 TWIST1Q15672 202 aa2.52□□□□□ -2.01
MCF2-203ENST00000370576 A8MWP4 228 aa2.51□□□□□ -2.01
MCF2-203ENST00000370576 F8VRH5 84 aa2.51□□□□□ -2.01
MCF2-203ENST00000370576 H3BVH4 76 aa2.51□□□□□ -2.01
MCF2-203ENST00000370576 SMCR5Q8TEV8 140 aa2.51□□□□□ -2.01
MCF2-203ENST00000370576 GVQW2A0A096LPI5 108 aaPredicted RBP2.51□□□□□ -2.01
MCF2-203ENST00000370576 PANO1I0J062 215 aa2.51□□□□□ -2.01
MCF2-203ENST00000370576 SCGB1C2P0DMR2 95 aa2.51□□□□□ -2.01
MCF2-203ENST00000370576 Q8N814 137 aa2.51□□□□□ -2.01
MCF2-203ENST00000370576 RPL39LQ96EH5 51 aaKnown RBP2.51□□□□□ -2.01
MCF2-203ENST00000370576 CELA1Q9UNI1 258 aa2.51□□□□□ -2.01
MCF2-203ENST00000370576 CFC1BP0CG36 223 aa2.5□□□□□ -2.01
MCF2-203ENST00000370576 ETDBQ3ZM63 59 aa2.5□□□□□ -2.01
MCF2-203ENST00000370576 IFI27L1Q96BM0 104 aa2.5□□□□□ -2.01
MCF2-203ENST00000370576 ZNF625Q96I27 306 aaPredicted RBP2.5□□□□□ -2.01
MCF2-203ENST00000370576 POLQO75417 2590 aa2.5□□□□□ -2.01
MCF2-203ENST00000370576 TENM1Q9UKZ4 2725 aa2.5□□□□□ -2.01
MCF2-203ENST00000370576 LEPROTL1O95214 131 aa2.5□□□□□ -2.01
MCF2-203ENST00000370576 SYCNQ0VAF6 134 aa2.5□□□□□ -2.01
MCF2-203ENST00000370576 SPINK13Q1W4C9 94 aa2.5□□□□□ -2.01
MCF2-203ENST00000370576 C14orf178Q8N769 122 aaPredicted RBP2.5□□□□□ -2.01
MCF2-203ENST00000370576 CDC42SE2Q9NRR3 84 aa2.5□□□□□ -2.01
MCF2-203ENST00000370576 TRAV12-3A0A0B4J271 114 aa2.5□□□□□ -2.01
MCF2-203ENST00000370576 ATP5EP56381 51 aaPredicted RBP2.5□□□□□ -2.01
MCF2-203ENST00000370576 SOSTDC1Q6X4U4 206 aa2.5□□□□□ -2.01
MCF2-203ENST00000370576 FAM19A2Q8N3H0 131 aa2.5□□□□□ -2.01
MCF2-203ENST00000370576 DAND5Q8N907 189 aa2.5□□□□□ -2.01
MCF2-203ENST00000370576 FN1P02751 2386 aaKnown RBP2.5□□□□□ -2.01
MCF2-203ENST00000370576 SPG11Q96JI7 2443 aa2.5□□□□□ -2.01
MCF2-203ENST00000370576 COL7A1Q02388 2944 aa2.5□□□□□ -2.01
MCF2-203ENST00000370576 ARID1AO14497 2285 aa2.49□□□□□ -2.01
MCF2-203ENST00000370576 A8MUU9 505 aa2.49□□□□□ -2.01
MCF2-203ENST00000370576 CKS2P33552 79 aa2.49□□□□□ -2.01
MCF2-203ENST00000370576 RPL36AP83881 106 aaKnown RBP2.49□□□□□ -2.01
MCF2-203ENST00000370576 KMT2CQ8NEZ4 4911 aaKnown RBP2.49□□□□□ -2.01
MCF2-203ENST00000370576 HIVEP2P31629 2446 aa2.49□□□□□ -2.01
MCF2-203ENST00000370576 CIRBP-AS1Q8TBR5 109 aa2.49□□□□□ -2.01
MCF2-203ENST00000370576 PHLDA3Q9Y5J5 127 aa2.49□□□□□ -2.01
MCF2-203ENST00000370576 FLNAP21333 2647 aaKnown RBP2.49□□□□□ -2.01
MCF2-203ENST00000370576 VWFP04275 2813 aa2.49□□□□□ -2.01
MCF2-203ENST00000370576 IGHV3OR16-8A0A075B7F1 116 aa2.49□□□□□ -2.01
MCF2-203ENST00000370576 SMIM1B2RUZ4 78 aa2.49□□□□□ -2.01
MCF2-203ENST00000370576 SNCGO76070 127 aa2.49□□□□□ -2.01
MCF2-203ENST00000370576 CEND1Q8N111 149 aa2.49□□□□□ -2.01
MCF2-203ENST00000370576 DYNC1H1Q14204 4646 aaKnown RBP2.49□□□□□ -2.01
MCF2-203ENST00000370576 A0A087WSZ3 146 aa2.48□□□□□ -2.01
MCF2-203ENST00000370576 ZNF22P17026 224 aaPredicted RBP2.48□□□□□ -2.01
MCF2-203ENST00000370576 Q8NBF4 154 aa2.48□□□□□ -2.01
MCF2-203ENST00000370576 LINC00167Q96N53 147 aa2.48□□□□□ -2.01
MCF2-203ENST00000370576 MRPL35Q9NZE8 188 aaKnown RBP2.48□□□□□ -2.01
MCF2-203ENST00000370576 HSPG2P98160 4391 aa2.48□□□□□ -2.01
MCF2-203ENST00000370576 IGHV3-49A0A0A0MS15 119 aa2.48□□□□□ -2.01
MCF2-203ENST00000370576 LINC01547P58512 204 aaPredicted RBP2.48□□□□□ -2.01
MCF2-203ENST00000370576 TTTY13Q9BZ97 58 aa2.48□□□□□ -2.01
MCF2-203ENST00000370576 IGKV2D-26A0A0A0MRZ7 120 aa2.48□□□□□ -2.01
MCF2-203ENST00000370576 NDUFA1O15239 70 aa2.48□□□□□ -2.01
MCF2-203ENST00000370576 KLKP1Q107X0 134 aa2.48□□□□□ -2.01
MCF2-203ENST00000370576 SFTA2Q6UW10 78 aa2.48□□□□□ -2.01
MCF2-203ENST00000370576 SERP2Q8N6R1 65 aa2.48□□□□□ -2.01
MCF2-203ENST00000370576 C1orf64Q8NEQ6 169 aa2.48□□□□□ -2.01
MCF2-203ENST00000370576 SETD2Q9BYW2 2564 aaPredicted RBP2.48□□□□□ -2.01
MCF2-203ENST00000370576 RYR2Q92736 4967 aa2.48□□□□□ -2.01
MCF2-203ENST00000370576 DNAH10OSP0CZ25 163 aa2.47□□□□□ -2.01
MCF2-203ENST00000370576 UBE2AP49459 152 aa2.47□□□□□ -2.01
MCF2-203ENST00000370576 TIMM8BQ9Y5J9 83 aaPredicted RBP2.47□□□□□ -2.01
MCF2-203ENST00000370576 AKAP6Q13023 2319 aa2.47□□□□□ -2.01
MCF2-203ENST00000370576 APOBP04114 4563 aaKnown RBP2.47□□□□□ -2.01
MCF2-203ENST00000370576 TRBV6-8A0A0A6YYG3 113 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms