RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 EP400Q96L91 3159 aa8.8□□□□□ -1
HCFC1-202ENST00000369984 J3QL48 77 aa8.8□□□□□ -1
HCFC1-202ENST00000369984 GOLGB1Q14789 3259 aaKnown RBP8.8□□□□□ -1
HCFC1-202ENST00000369984 LINC01561Q8N1V8 128 aa8.79□□□□□ -1
HCFC1-202ENST00000369984 LYPD5Q6UWN5 251 aa8.79□□□□□ -1
HCFC1-202ENST00000369984 Q8N2B8 174 aa8.79□□□□□ -1
HCFC1-202ENST00000369984 AVPP01185 164 aa8.79□□□□□ -1
HCFC1-202ENST00000369984 CDIP1Q9H305 208 aa8.78□□□□□ -1
HCFC1-202ENST00000369984 JMJD1CQ15652 2540 aa8.78□□□□□ -1
HCFC1-202ENST00000369984 RPS28P62857 69 aaKnown RBP8.78□□□□□ -1
HCFC1-202ENST00000369984 Q6ZRU5 148 aa8.77□□□□□ -1
HCFC1-202ENST00000369984 A0A096LNJ9 63 aa8.77□□□□□ -1.01
HCFC1-202ENST00000369984 COX8CQ7Z4L0 72 aa8.77□□□□□ -1.01
HCFC1-202ENST00000369984 KIAA0087Q14695 138 aa8.77□□□□□ -1.01
HCFC1-202ENST00000369984 CDSNQ15517 529 aa8.77□□□□□ -1.01
HCFC1-202ENST00000369984 TRAV22A0A0B4J277 110 aa8.76□□□□□ -1.01
HCFC1-202ENST00000369984 SPACA4Q8TDM5 124 aa8.75□□□□□ -1.01
HCFC1-202ENST00000369984 C22orf24Q9Y442 160 aa8.75□□□□□ -1.01
HCFC1-202ENST00000369984 SMCR5Q8TEV8 140 aa8.74□□□□□ -1.01
HCFC1-202ENST00000369984 LINC00313P59037 77 aa8.74□□□□□ -1.01
HCFC1-202ENST00000369984 SPATA3Q8NHX4 192 aa8.74□□□□□ -1.01
HCFC1-202ENST00000369984 MTORP42345 2549 aa8.74□□□□□ -1.01
HCFC1-202ENST00000369984 CR1P17927 2039 aa8.73□□□□□ -1.01
HCFC1-202ENST00000369984 SPTBN4Q9H254 2564 aa8.73□□□□□ -1.01
HCFC1-202ENST00000369984 LUZP6Q538Z0 58 aa8.73□□□□□ -1.01
HCFC1-202ENST00000369984 H3BPC8 53 aa8.72□□□□□ -1.01
HCFC1-202ENST00000369984 MOBPQ13875 183 aa8.72□□□□□ -1.01
HCFC1-202ENST00000369984 POLQO75417 2590 aa8.71□□□□□ -1.01
HCFC1-202ENST00000369984 C16orf95Q9H693 158 aa8.7□□□□□ -1.02
HCFC1-202ENST00000369984 LINC01546A6NGU7 62 aa8.7□□□□□ -1.02
HCFC1-202ENST00000369984 A0A1B0GW54 56 aa8.69□□□□□ -1.02
HCFC1-202ENST00000369984 APLNQ9ULZ1 77 aa8.69□□□□□ -1.02
HCFC1-202ENST00000369984 LINC01600Q96MT4 127 aa8.68□□□□□ -1.02
HCFC1-202ENST00000369984 CD164Q04900 197 aa8.68□□□□□ -1.02
HCFC1-202ENST00000369984 COX6B2Q6YFQ2 88 aa8.68□□□□□ -1.02
HCFC1-202ENST00000369984 NCOR2Q9Y618 2525 aa8.68□□□□□ -1.02
HCFC1-202ENST00000369984 LINC01554Q52M75 96 aa8.67□□□□□ -1.02
HCFC1-202ENST00000369984 ANKRD11Q6UB99 2663 aaPredicted RBP8.67□□□□□ -1.02
HCFC1-202ENST00000369984 BPTFQ12830 3046 aa8.66□□□□□ -1.02
HCFC1-202ENST00000369984 IGLV5-39A0A0G2JS06 123 aa8.66□□□□□ -1.02
HCFC1-202ENST00000369984 TM2D3Q9BRN9 247 aa8.65□□□□□ -1.02
HCFC1-202ENST00000369984 UQCR11O14957 56 aa8.63□□□□□ -1.03
HCFC1-202ENST00000369984 FHL3Q13643 280 aa8.63□□□□□ -1.03
HCFC1-202ENST00000369984 A8MUN3 132 aa8.63□□□□□ -1.03
HCFC1-202ENST00000369984 KRTAP10-9P60411 292 aa8.63□□□□□ -1.03
HCFC1-202ENST00000369984 LINC00167Q96N53 147 aa8.63□□□□□ -1.03
HCFC1-202ENST00000369984 FAM19A4Q96LR4 140 aa8.63□□□□□ -1.03
HCFC1-202ENST00000369984 Q6ZQT0 140 aa8.63□□□□□ -1.03
HCFC1-202ENST00000369984 FAM218AQ96MZ4 157 aa8.63□□□□□ -1.03
HCFC1-202ENST00000369984 BCE1O60756 84 aa8.62□□□□□ -1.03
HCFC1-202ENST00000369984 C11orf72Q8NBR9 251 aa8.62□□□□□ -1.03
HCFC1-202ENST00000369984 TYMSOSQ8TAI1 123 aa8.62□□□□□ -1.03
HCFC1-202ENST00000369984 ELOF1P60002 83 aaKnown RBP8.62□□□□□ -1.03
HCFC1-202ENST00000369984 IGHV3OR16-9A0A0B4J2B5 98 aa8.62□□□□□ -1.03
HCFC1-202ENST00000369984 PRRC2CQ9Y520 2896 aaKnown RBP8.61□□□□□ -1.03
HCFC1-202ENST00000369984 KTN1-AS1Q86SY8 53 aa8.61□□□□□ -1.03
HCFC1-202ENST00000369984 EPM2AB3EWF7 344 aa8.61□□□□□ -1.03
HCFC1-202ENST00000369984 SMCPP49901 116 aaPredicted RBP8.61□□□□□ -1.03
HCFC1-202ENST00000369984 LINC00476Q8WZB0 136 aa8.6□□□□□ -1.03
HCFC1-202ENST00000369984 LOC110117498A0A087WWA1 95 aa8.6□□□□□ -1.03
HCFC1-202ENST00000369984 CHTF8P0CG12 524 aa8.6□□□□□ -1.03
HCFC1-202ENST00000369984 KIF25-AS1Q9Y6Z4 181 aa8.6□□□□□ -1.03
HCFC1-202ENST00000369984 MIR22HGQ0VDD5 57 aa8.6□□□□□ -1.03
HCFC1-202ENST00000369984 COA5Q86WW8 74 aa8.59□□□□□ -1.03
HCFC1-202ENST00000369984 CYP4F30PQ9H0H9 118 aa8.59□□□□□ -1.03
HCFC1-202ENST00000369984 C9orf129Q5T035 196 aaKnown RBP8.58□□□□□ -1.04
HCFC1-202ENST00000369984 Q96NJ1 140 aa8.58□□□□□ -1.04
HCFC1-202ENST00000369984 LOC101927531A0A1B0GV80 90 aa8.58□□□□□ -1.04
HCFC1-202ENST00000369984 RPL37AP61513 92 aaKnown RBP8.58□□□□□ -1.04
HCFC1-202ENST00000369984 USP24Q9UPU5 2620 aa8.58□□□□□ -1.04
HCFC1-202ENST00000369984 C16orf90A8MZG2 172 aa8.58□□□□□ -1.04
HCFC1-202ENST00000369984 Q6ZRX8 168 aa8.57□□□□□ -1.04
HCFC1-202ENST00000369984 Q8NBF4 154 aa8.56□□□□□ -1.04
HCFC1-202ENST00000369984 LCA10Q71F78 164 aa8.56□□□□□ -1.04
HCFC1-202ENST00000369984 PHF5AQ7RTV0 110 aaKnown RBP8.56□□□□□ -1.04
HCFC1-202ENST00000369984 ERC2-IT1O76042 136 aa8.56□□□□□ -1.04
HCFC1-202ENST00000369984 DNAH12Q6ZR08 3092 aa8.55□□□□□ -1.04
HCFC1-202ENST00000369984 IGLV5-45A0A087WSX0 123 aa8.55□□□□□ -1.04
HCFC1-202ENST00000369984 PRO0461Q9UI25 63 aa8.54□□□□□ -1.04
HCFC1-202ENST00000369984 CSNK1G2-AS1Q8NCQ2 148 aa8.54□□□□□ -1.04
HCFC1-202ENST00000369984 COL4A2P08572 1712 aa8.53□□□□□ -1.04
HCFC1-202ENST00000369984 A0A1W2PPR1 153 aa8.52□□□□□ -1.04
HCFC1-202ENST00000369984 USP9YO00507 2555 aaPredicted RBP8.52□□□□□ -1.05
HCFC1-202ENST00000369984 Q6ZRP5 223 aa8.52□□□□□ -1.05
HCFC1-202ENST00000369984 LINC00336Q6ZUF6 198 aa8.52□□□□□ -1.05
HCFC1-202ENST00000369984 ST20-AS1Q8NBB2 130 aa8.5□□□□□ -1.05
HCFC1-202ENST00000369984 CDC42SE1Q9NRR8 79 aa8.5□□□□□ -1.05
HCFC1-202ENST00000369984 LINC00315P59091 139 aa8.5□□□□□ -1.05
HCFC1-202ENST00000369984 LINC00483Q53H64 154 aa8.49□□□□□ -1.05
HCFC1-202ENST00000369984 TRBV7-4A0A0J9YYF1 115 aa8.49□□□□□ -1.05
HCFC1-202ENST00000369984 A8MWP4 228 aa8.48□□□□□ -1.05
HCFC1-202ENST00000369984 RTL8CO15255 209 aa8.48□□□□□ -1.05
HCFC1-202ENST00000369984 CHD8Q9HCK8 2581 aa8.48□□□□□ -1.05
HCFC1-202ENST00000369984 PRO3102Q9H379 93 aa8.47□□□□□ -1.05
HCFC1-202ENST00000369984 H3BS24 57 aa8.47□□□□□ -1.05
HCFC1-202ENST00000369984 H3BNG1 76 aa8.47□□□□□ -1.05
HCFC1-202ENST00000369984 K7EQZ3 153 aa8.46□□□□□ -1.05
HCFC1-202ENST00000369984 IGLV6-57P01721 117 aa8.45□□□□□ -1.06
HCFC1-202ENST00000369984 RBM12B-AS1Q9P1G2 102 aa8.44□□□□□ -1.06
HCFC1-202ENST00000369984 A0A0D9SG42 100 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms