RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 MIR7-3HGQ8N6C7 128 aa12.87□□□□□ -0.35
CHTOP-204ENST00000368694 H7C2G1 150 aa12.87□□□□□ -0.35
CHTOP-204ENST00000368694 IFITM1P13164 125 aa12.87□□□□□ -0.35
CHTOP-204ENST00000368694 C9orf116Q5BN46 136 aaPredicted RBP12.86□□□□□ -0.35
CHTOP-204ENST00000368694 LINC00308Q8TCZ7 52 aa12.86□□□□□ -0.35
CHTOP-204ENST00000368694 CAMK2N2Q96S95 79 aa12.86□□□□□ -0.35
CHTOP-204ENST00000368694 COPS9Q8WXC6 57 aa12.85□□□□□ -0.35
CHTOP-204ENST00000368694 ANAPC13Q9BS18 74 aa12.85□□□□□ -0.35
CHTOP-204ENST00000368694 GVQW2A0A096LPI5 108 aaPredicted RBP12.85□□□□□ -0.35
CHTOP-204ENST00000368694 PSCAO43653 123 aa12.85□□□□□ -0.35
CHTOP-204ENST00000368694 USP17L23D6RBM5 183 aa12.84□□□□□ -0.35
CHTOP-204ENST00000368694 LINC01620Q4KN68 170 aa12.84□□□□□ -0.35
CHTOP-204ENST00000368694 LINC01600Q96MT4 127 aa12.84□□□□□ -0.35
CHTOP-204ENST00000368694 LECT2O14960 151 aa12.83□□□□□ -0.36
CHTOP-204ENST00000368694 COX17Q14061 63 aa12.83□□□□□ -0.36
CHTOP-204ENST00000368694 TRBV30A0A0K0K1B3 111 aa12.82□□□□□ -0.36
CHTOP-204ENST00000368694 M0R2N4 97 aa12.82□□□□□ -0.36
CHTOP-204ENST00000368694 SOSTDC1Q6X4U4 206 aa12.82□□□□□ -0.36
CHTOP-204ENST00000368694 C2orf48Q96LS8 159 aa12.82□□□□□ -0.36
CHTOP-204ENST00000368694 SNCGO76070 127 aa12.81□□□□□ -0.36
CHTOP-204ENST00000368694 RPL13AP40429 203 aaKnown RBP12.81□□□□□ -0.36
CHTOP-204ENST00000368694 C6orf48Q9UBA6 75 aa12.81□□□□□ -0.36
CHTOP-204ENST00000368694 TRBV10-2A0A0K0K1G8 114 aa12.81□□□□□ -0.36
CHTOP-204ENST00000368694 Q6ZRU5 148 aa12.81□□□□□ -0.36
CHTOP-204ENST00000368694 LY6G6CO95867 125 aa12.8□□□□□ -0.36
CHTOP-204ENST00000368694 TRIAP1O43715 76 aa12.79□□□□□ -0.36
CHTOP-204ENST00000368694 C3orf84H3BNL1 204 aa12.79□□□□□ -0.36
CHTOP-204ENST00000368694 GAGE2BQ13066 116 aa12.79□□□□□ -0.36
CHTOP-204ENST00000368694 GAGE2EQ4V326 116 aa12.79□□□□□ -0.36
CHTOP-204ENST00000368694 GAGE2DQ9UEU5 116 aa12.79□□□□□ -0.36
CHTOP-204ENST00000368694 VPS13DQ5THJ4 4388 aa12.78□□□□□ -0.36
CHTOP-204ENST00000368694 F8WDY8 70 aa12.77□□□□□ -0.36
CHTOP-204ENST00000368694 SYCNQ0VAF6 134 aa12.77□□□□□ -0.36
CHTOP-204ENST00000368694 DNAH10Q8IVF4 4471 aa12.76□□□□□ -0.37
CHTOP-204ENST00000368694 SND1-IT1Q9HBX3 110 aa12.76□□□□□ -0.37
CHTOP-204ENST00000368694 TEX49A0A1B0GTD5 131 aa12.75□□□□□ -0.37
CHTOP-204ENST00000368694 COX6CP09669 75 aa12.75□□□□□ -0.37
CHTOP-204ENST00000368694 Q6Q795 121 aa12.75□□□□□ -0.37
CHTOP-204ENST00000368694 PPDPFQ9H3Y8 114 aa12.75□□□□□ -0.37
CHTOP-204ENST00000368694 LINC00476Q8WZB0 136 aa12.74□□□□□ -0.37
CHTOP-204ENST00000368694 H3BT86 120 aa12.73□□□□□ -0.37
CHTOP-204ENST00000368694 NDUFV3P56181 108 aaKnown RBP12.73□□□□□ -0.37
CHTOP-204ENST00000368694 SLPIP03973 132 aa12.71□□□□□ -0.37
CHTOP-204ENST00000368694 Q6ZRN7 208 aaPredicted RBP12.71□□□□□ -0.38
CHTOP-204ENST00000368694 Q6ZR54 194 aa12.7□□□□□ -0.38
CHTOP-204ENST00000368694 NDUFC2-KCTD14E9PQ53 114 aa12.69□□□□□ -0.38
CHTOP-204ENST00000368694 KMT2AQ03164 3969 aa12.69□□□□□ -0.38
CHTOP-204ENST00000368694 C14orf177Q52M58 125 aa12.69□□□□□ -0.38
CHTOP-204ENST00000368694 LST1O00453 97 aa12.68□□□□□ -0.38
CHTOP-204ENST00000368694 XAGE1AQ9HD64 81 aa12.68□□□□□ -0.38
CHTOP-204ENST00000368694 SS18L2Q9UHA2 77 aa12.68□□□□□ -0.38
CHTOP-204ENST00000368694 FAM240AA0A1B0GVK7 77 aa12.66□□□□□ -0.38
CHTOP-204ENST00000368694 B5MCH6 92 aa12.66□□□□□ -0.38
CHTOP-204ENST00000368694 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.66□□□□□ -0.38
CHTOP-204ENST00000368694 IGKV2-28A0A075B6P5 120 aa12.66□□□□□ -0.38
CHTOP-204ENST00000368694 IGKV2D-28P01615 120 aa12.66□□□□□ -0.38
CHTOP-204ENST00000368694 RPL18AQ02543 176 aaKnown RBP12.66□□□□□ -0.38
CHTOP-204ENST00000368694 Q6ZRP5 223 aa12.66□□□□□ -0.38
CHTOP-204ENST00000368694 CLEC2BQ92478 149 aa12.66□□□□□ -0.38
CHTOP-204ENST00000368694 LRCOL1A6NCL2 159 aa12.65□□□□□ -0.38
CHTOP-204ENST00000368694 TRAV13-2A0A0B4J235 113 aa12.65□□□□□ -0.39
CHTOP-204ENST00000368694 LINC00337Q8N6G1 96 aa12.64□□□□□ -0.39
CHTOP-204ENST00000368694 NDUFC2O95298 119 aa12.63□□□□□ -0.39
CHTOP-204ENST00000368694 PRR3P79522 188 aaKnown RBP12.63□□□□□ -0.39
CHTOP-204ENST00000368694 C1orf134Q5TEV5 83 aa12.63□□□□□ -0.39
CHTOP-204ENST00000368694 CNBPP62633 177 aaKnown RBP12.61□□□□□ -0.39
CHTOP-204ENST00000368694 Q8NDZ9 215 aa12.61□□□□□ -0.39
CHTOP-204ENST00000368694 OR13C6PQ8NH95 151 aa12.61□□□□□ -0.39
CHTOP-204ENST00000368694 CCDC179H3BU77 68 aa12.61□□□□□ -0.39
CHTOP-204ENST00000368694 NCR3O14931 201 aa12.61□□□□□ -0.39
CHTOP-204ENST00000368694 TLX1NBP0CAT3 122 aa12.61□□□□□ -0.39
CHTOP-204ENST00000368694 LOC107984640A0A0U1RRK4 108 aa12.58□□□□□ -0.39
CHTOP-204ENST00000368694 ALMS1Q8TCU4 4167 aa12.58□□□□□ -0.39
CHTOP-204ENST00000368694 Q8N814 137 aa12.57□□□□□ -0.4
CHTOP-204ENST00000368694 A0A087WTM6 91 aa12.57□□□□□ -0.4
CHTOP-204ENST00000368694 C9orf129Q5T035 196 aaKnown RBP12.57□□□□□ -0.4
CHTOP-204ENST00000368694 TRBV7-7A0A0K0K1E9 115 aa12.56□□□□□ -0.4
CHTOP-204ENST00000368694 ACYP1P07311 99 aa12.55□□□□□ -0.4
CHTOP-204ENST00000368694 S100A7L2Q5SY68 101 aa12.55□□□□□ -0.4
CHTOP-204ENST00000368694 DNAH2Q9P225 4427 aa12.53□□□□□ -0.4
CHTOP-204ENST00000368694 VPREB1P12018 145 aa12.53□□□□□ -0.4
CHTOP-204ENST00000368694 TMEM126AQ9H061 195 aa12.53□□□□□ -0.4
CHTOP-204ENST00000368694 DNAH6Q9C0G6 4158 aa12.52□□□□□ -0.4
CHTOP-204ENST00000368694 SMIM11BQ8TCY0 68 aa12.52□□□□□ -0.41
CHTOP-204ENST00000368694 C9orf163Q8N9P6 203 aa12.5□□□□□ -0.41
CHTOP-204ENST00000368694 IGKV2-24A0A0C4DH68 120 aa12.5□□□□□ -0.41
CHTOP-204ENST00000368694 A0A096LNI7 61 aa12.49□□□□□ -0.41
CHTOP-204ENST00000368694 RPL28P46779 137 aaKnown RBP12.49□□□□□ -0.41
CHTOP-204ENST00000368694 NKAPP1Q8N9T2 125 aa12.49□□□□□ -0.41
CHTOP-204ENST00000368694 IMUPQ9GZP8 106 aa12.49□□□□□ -0.41
CHTOP-204ENST00000368694 SERTAD4-AS1Q5TG53 156 aa12.49□□□□□ -0.41
CHTOP-204ENST00000368694 FAM168BA1KXE4 195 aa12.48□□□□□ -0.41
CHTOP-204ENST00000368694 C16orf90A8MZG2 172 aa12.48□□□□□ -0.41
CHTOP-204ENST00000368694 TRACP01848 142 aa12.48□□□□□ -0.41
CHTOP-204ENST00000368694 M0R378 163 aa12.47□□□□□ -0.41
CHTOP-204ENST00000368694 TRBV10-3A0A0K0K1G6 114 aa12.46□□□□□ -0.41
CHTOP-204ENST00000368694 PLA2G2DQ9UNK4 145 aa12.46□□□□□ -0.41
CHTOP-204ENST00000368694 PKIGQ9Y2B9 76 aa12.46□□□□□ -0.41
CHTOP-204ENST00000368694 IGLV6-57P01721 117 aa12.46□□□□□ -0.42
CHTOP-204ENST00000368694 TNP2Q05952 138 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms