RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 LY6G6DO95868 133 aa8.24□□□□□ -1.09
CDC42BPA-202ENST00000366764 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.23□□□□□ -1.09
CDC42BPA-202ENST00000366764 TEP1Q99973 2627 aaKnown RBP8.23□□□□□ -1.09
CDC42BPA-202ENST00000366764 REG3GQ6UW15 175 aa8.23□□□□□ -1.09
CDC42BPA-202ENST00000366764 C10orf25Q5T742 122 aa8.22□□□□□ -1.09
CDC42BPA-202ENST00000366764 FAM218AQ96MZ4 157 aa8.22□□□□□ -1.09
CDC42BPA-202ENST00000366764 SEC61GP60059 68 aa8.22□□□□□ -1.09
CDC42BPA-202ENST00000366764 PRB2P02812 416 aaPredicted RBP8.21□□□□□ -1.09
CDC42BPA-202ENST00000366764 WFDC13Q8IUB5 93 aa8.21□□□□□ -1.1
CDC42BPA-202ENST00000366764 SPTSSBQ8NFR3 76 aa8.21□□□□□ -1.1
CDC42BPA-202ENST00000366764 H3BNG1 76 aa8.2□□□□□ -1.1
CDC42BPA-202ENST00000366764 C1orf195Q5TG92 126 aa8.2□□□□□ -1.1
CDC42BPA-202ENST00000366764 RPL37AP8A6NKH3 93 aa8.2□□□□□ -1.1
CDC42BPA-202ENST00000366764 A6NED7 52 aa8.19□□□□□ -1.1
CDC42BPA-202ENST00000366764 PRO0628Q9UI54 55 aa8.19□□□□□ -1.1
CDC42BPA-202ENST00000366764 IGSF10Q6WRI0 2623 aa8.19□□□□□ -1.1
CDC42BPA-202ENST00000366764 LYPD5Q6UWN5 251 aa8.19□□□□□ -1.1
CDC42BPA-202ENST00000366764 A0A0U1RQV1 116 aa8.19□□□□□ -1.1
CDC42BPA-202ENST00000366764 Q8N9L7 120 aa8.19□□□□□ -1.1
CDC42BPA-202ENST00000366764 STAB1Q9NY15 2570 aa8.19□□□□□ -1.1
CDC42BPA-202ENST00000366764 ESRGQ1W209 222 aa8.19□□□□□ -1.1
CDC42BPA-202ENST00000366764 Q6ZQT0 140 aa8.18□□□□□ -1.1
CDC42BPA-202ENST00000366764 CELA1Q9UNI1 258 aa8.18□□□□□ -1.1
CDC42BPA-202ENST00000366764 VPS13AQ96RL7 3174 aa8.18□□□□□ -1.1
CDC42BPA-202ENST00000366764 ERC2-IT1O76042 136 aa8.18□□□□□ -1.1
CDC42BPA-202ENST00000366764 GVQW2A0A096LPI5 108 aaPredicted RBP8.18□□□□□ -1.1
CDC42BPA-202ENST00000366764 LINC01600Q96MT4 127 aa8.18□□□□□ -1.1
CDC42BPA-202ENST00000366764 FAM30AQ9NZY2 134 aa8.17□□□□□ -1.1
CDC42BPA-202ENST00000366764 FSHBP01225 129 aa8.17□□□□□ -1.1
CDC42BPA-202ENST00000366764 C6orf223Q8N319 242 aa8.17□□□□□ -1.1
CDC42BPA-202ENST00000366764 hDV103S1A0JD37 113 aa8.17□□□□□ -1.1
CDC42BPA-202ENST00000366764 A0A0J9YWU9 116 aa8.17□□□□□ -1.1
CDC42BPA-202ENST00000366764 HCG22E2RYF7 251 aa8.17□□□□□ -1.1
CDC42BPA-202ENST00000366764 SPATA3Q8NHX4 192 aa8.17□□□□□ -1.1
CDC42BPA-202ENST00000366764 ELOF1P60002 83 aaKnown RBP8.16□□□□□ -1.1
CDC42BPA-202ENST00000366764 KRTAP10-9P60411 292 aa8.16□□□□□ -1.1
CDC42BPA-202ENST00000366764 LINC01556Q5JQF7 62 aa8.16□□□□□ -1.1
CDC42BPA-202ENST00000366764 NANOS2P60321 138 aaKnown RBP8.15□□□□□ -1.1
CDC42BPA-202ENST00000366764 C7orf33Q8WU49 177 aa8.14□□□□□ -1.11
CDC42BPA-202ENST00000366764 PLAC8L1A1L4L8 177 aa8.14□□□□□ -1.11
CDC42BPA-202ENST00000366764 CASC2Q6XLA1 102 aa8.14□□□□□ -1.11
CDC42BPA-202ENST00000366764 IGLV6-57P01721 117 aa8.13□□□□□ -1.11
CDC42BPA-202ENST00000366764 Q9UF83 564 aa8.13□□□□□ -1.11
CDC42BPA-202ENST00000366764 KMT2BQ9UMN6 2715 aaPredicted RBP8.13□□□□□ -1.11
CDC42BPA-202ENST00000366764 LINC00208Q96KT6 92 aa8.12□□□□□ -1.11
CDC42BPA-202ENST00000366764 Q6ZTC4 211 aa8.12□□□□□ -1.11
CDC42BPA-202ENST00000366764 PLA2G2AP14555 144 aa8.12□□□□□ -1.11
CDC42BPA-202ENST00000366764 NBEAQ8NFP9 2946 aa8.12□□□□□ -1.11
CDC42BPA-202ENST00000366764 C6orf48Q9UBA6 75 aa8.12□□□□□ -1.11
CDC42BPA-202ENST00000366764 LIMD2Q9BT23 127 aa8.12□□□□□ -1.11
CDC42BPA-202ENST00000366764 H3BPC8 53 aa8.11□□□□□ -1.11
CDC42BPA-202ENST00000366764 A0A096LNI7 61 aa8.11□□□□□ -1.11
CDC42BPA-202ENST00000366764 Q6ZRU5 148 aa8.11□□□□□ -1.11
CDC42BPA-202ENST00000366764 NHLRC4P0CG21 123 aaPredicted RBP8.1□□□□□ -1.11
CDC42BPA-202ENST00000366764 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.1□□□□□ -1.11
CDC42BPA-202ENST00000366764 NBEAL2Q6ZNJ1 2754 aa8.1□□□□□ -1.11
CDC42BPA-202ENST00000366764 Q9BRP9 147 aa8.1□□□□□ -1.11
CDC42BPA-202ENST00000366764 ITPR2Q14571 2701 aa8.1□□□□□ -1.11
CDC42BPA-202ENST00000366764 FRYQ5TBA9 3013 aa8.1□□□□□ -1.11
CDC42BPA-202ENST00000366764 TP53AIP1Q9HCN2 124 aa8.1□□□□□ -1.11
CDC42BPA-202ENST00000366764 SMCR5Q8TEV8 140 aa8.09□□□□□ -1.11
CDC42BPA-202ENST00000366764 FLG2Q5D862 2391 aaPredicted RBP8.09□□□□□ -1.11
CDC42BPA-202ENST00000366764 STAB2Q8WWQ8 2551 aa8.09□□□□□ -1.11
CDC42BPA-202ENST00000366764 UBR5O95071 2799 aaPredicted RBP8.09□□□□□ -1.11
CDC42BPA-202ENST00000366764 Q8NBF4 154 aa8.09□□□□□ -1.11
CDC42BPA-202ENST00000366764 PRR4Q16378 134 aa8.09□□□□□ -1.11
CDC42BPA-202ENST00000366764 X6R8D5 127 aa8.09□□□□□ -1.11
CDC42BPA-202ENST00000366764 K7ERS5 55 aa8.08□□□□□ -1.12
CDC42BPA-202ENST00000366764 NUPR2A6NF83 97 aa8.08□□□□□ -1.12
CDC42BPA-202ENST00000366764 Q6ZRX8 168 aa8.08□□□□□ -1.12
CDC42BPA-202ENST00000366764 H0Y9P7 68 aa8.07□□□□□ -1.12
CDC42BPA-202ENST00000366764 PMAIP1Q13794 54 aa8.07□□□□□ -1.12
CDC42BPA-202ENST00000366764 ITPR1Q14643 2758 aa8.07□□□□□ -1.12
CDC42BPA-202ENST00000366764 A0A087WSZ3 146 aa8.07□□□□□ -1.12
CDC42BPA-202ENST00000366764 KLKP1Q107X0 134 aa8.07□□□□□ -1.12
CDC42BPA-202ENST00000366764 CSNK1G2-AS1Q8NCQ2 148 aa8.05□□□□□ -1.12
CDC42BPA-202ENST00000366764 OXLD1Q5BKU9 147 aa8.05□□□□□ -1.12
CDC42BPA-202ENST00000366764 KIAA0087Q14695 138 aa8.05□□□□□ -1.12
CDC42BPA-202ENST00000366764 ZNF575Q86XF7 245 aa8.03□□□□□ -1.12
CDC42BPA-202ENST00000366764 TRBV7-4A0A0J9YYF1 115 aa8.03□□□□□ -1.12
CDC42BPA-202ENST00000366764 Q8NAQ8 132 aa8.02□□□□□ -1.13
CDC42BPA-202ENST00000366764 IGLV9-49A0A0B4J1Y8 123 aa8.02□□□□□ -1.13
CDC42BPA-202ENST00000366764 LINC00167Q96N53 147 aa8.02□□□□□ -1.13
CDC42BPA-202ENST00000366764 C22orf24Q9Y442 160 aa8.02□□□□□ -1.13
CDC42BPA-202ENST00000366764 LINC00612Q8N6U2 182 aa8.01□□□□□ -1.13
CDC42BPA-202ENST00000366764 RETNQ9HD89 108 aa8.01□□□□□ -1.13
CDC42BPA-202ENST00000366764 SMIM29Q86T20 159 aa8.01□□□□□ -1.13
CDC42BPA-202ENST00000366764 OBSCN-AS1Q96MR7 158 aa8.01□□□□□ -1.13
CDC42BPA-202ENST00000366764 C1orf64Q8NEQ6 169 aa8□□□□□ -1.13
CDC42BPA-202ENST00000366764 NSD1Q96L73 2696 aaPredicted RBP7.99□□□□□ -1.13
CDC42BPA-202ENST00000366764 SPINK6Q6UWN8 80 aa7.99□□□□□ -1.13
CDC42BPA-202ENST00000366764 FRYLO94915 3013 aa7.99□□□□□ -1.13
CDC42BPA-202ENST00000366764 WDFY4Q6ZS81 3184 aa7.99□□□□□ -1.13
CDC42BPA-202ENST00000366764 PSPHP1O15172 72 aa7.99□□□□□ -1.13
CDC42BPA-202ENST00000366764 PRR34Q9NV39 138 aa7.99□□□□□ -1.13
CDC42BPA-202ENST00000366764 EIF4EBP3O60516 100 aaPredicted RBP7.99□□□□□ -1.13
CDC42BPA-202ENST00000366764 TM2D3Q9BRN9 247 aa7.98□□□□□ -1.13
CDC42BPA-202ENST00000366764 VPREB1P12018 145 aa7.98□□□□□ -1.13
CDC42BPA-202ENST00000366764 A0A096LNT2 108 aa7.98□□□□□ -1.13
CDC42BPA-202ENST00000366764 KCNQ1DNQ9H478 68 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 223.9 ms