RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 RMI2Q96E14 147 aa13.59□□□□□ -0.23
TRIM58-201ENST00000366481 TRRAPQ9Y4A5 3859 aa13.59□□□□□ -0.23
TRIM58-201ENST00000366481 C9orf116Q5BN46 136 aaPredicted RBP13.58□□□□□ -0.23
TRIM58-201ENST00000366481 C16orf74Q96GX8 76 aa13.58□□□□□ -0.23
TRIM58-201ENST00000366481 C19orf73Q9NVV2 129 aa13.58□□□□□ -0.23
TRIM58-201ENST00000366481 PKIGQ9Y2B9 76 aa13.58□□□□□ -0.23
TRIM58-201ENST00000366481 NDUFC2-KCTD14E9PQ53 114 aa13.58□□□□□ -0.24
TRIM58-201ENST00000366481 SPATA3Q8NHX4 192 aa13.57□□□□□ -0.24
TRIM58-201ENST00000366481 F8WEM9 126 aa13.56□□□□□ -0.24
TRIM58-201ENST00000366481 LINC00336Q6ZUF6 198 aa13.56□□□□□ -0.24
TRIM58-201ENST00000366481 Q8N3U1 123 aa13.56□□□□□ -0.24
TRIM58-201ENST00000366481 LINC00482Q8N8I6 264 aa13.56□□□□□ -0.24
TRIM58-201ENST00000366481 TRAV10A0A0B4J240 114 aa13.56□□□□□ -0.24
TRIM58-201ENST00000366481 KMT2BQ9UMN6 2715 aaPredicted RBP13.56□□□□□ -0.24
TRIM58-201ENST00000366481 IGLV1-51P01701 117 aa13.55□□□□□ -0.24
TRIM58-201ENST00000366481 CSNK1G2-AS1Q8NCQ2 148 aa13.55□□□□□ -0.24
TRIM58-201ENST00000366481 SERP1Q9Y6X1 66 aa13.55□□□□□ -0.24
TRIM58-201ENST00000366481 NBEAL1Q6ZS30 2694 aa13.55□□□□□ -0.24
TRIM58-201ENST00000366481 TRAV7A0A075B6U4 112 aa13.54□□□□□ -0.24
TRIM58-201ENST00000366481 INAFM1C9JVW0 142 aa13.54□□□□□ -0.24
TRIM58-201ENST00000366481 GYPEP15421 78 aa13.54□□□□□ -0.24
TRIM58-201ENST00000366481 KRTAP1-1Q07627 177 aa13.54□□□□□ -0.24
TRIM58-201ENST00000366481 H7BZZ5 65 aa13.53□□□□□ -0.24
TRIM58-201ENST00000366481 LINC00269Q8N2A0 174 aa13.53□□□□□ -0.24
TRIM58-201ENST00000366481 LINC01547P58512 204 aaPredicted RBP13.53□□□□□ -0.24
TRIM58-201ENST00000366481 LY6G6DO95868 133 aa13.52□□□□□ -0.24
TRIM58-201ENST00000366481 MRAPQ8TCY5 172 aa13.52□□□□□ -0.24
TRIM58-201ENST00000366481 M0R2N4 97 aa13.52□□□□□ -0.24
TRIM58-201ENST00000366481 COL6A5A8TX70 2615 aa13.51□□□□□ -0.25
TRIM58-201ENST00000366481 NANOS2P60321 138 aaKnown RBP13.51□□□□□ -0.25
TRIM58-201ENST00000366481 Q6ZVQ6 151 aa13.49□□□□□ -0.25
TRIM58-201ENST00000366481 KRTAP10-3P60369 221 aa13.49□□□□□ -0.25
TRIM58-201ENST00000366481 TRBV10-3A0A0K0K1G6 114 aa13.48□□□□□ -0.25
TRIM58-201ENST00000366481 Q6ZQY7 126 aa13.48□□□□□ -0.25
TRIM58-201ENST00000366481 Q8IZM0 81 aa13.47□□□□□ -0.25
TRIM58-201ENST00000366481 BRK1Q8WUW1 75 aa13.47□□□□□ -0.25
TRIM58-201ENST00000366481 PRO0628Q9UI54 55 aa13.47□□□□□ -0.25
TRIM58-201ENST00000366481 FBN1P35555 2871 aaKnown RBP13.47□□□□□ -0.25
TRIM58-201ENST00000366481 A0A0U1RQV1 116 aa13.47□□□□□ -0.25
TRIM58-201ENST00000366481 Q6ZQT0 140 aa13.47□□□□□ -0.25
TRIM58-201ENST00000366481 ZNF561-AS1K7EIQ3 104 aa13.45□□□□□ -0.26
TRIM58-201ENST00000366481 LINC00474Q9P2X8 69 aa13.45□□□□□ -0.26
TRIM58-201ENST00000366481 ANGP03950 147 aaKnown RBP13.45□□□□□ -0.26
TRIM58-201ENST00000366481 HTN3P15516 51 aa13.45□□□□□ -0.26
TRIM58-201ENST00000366481 MPLKIPQ8TAP9 179 aa13.45□□□□□ -0.26
TRIM58-201ENST00000366481 DEFB135Q30KP9 77 aa13.45□□□□□ -0.26
TRIM58-201ENST00000366481 LINC00575Q6W349 94 aa13.45□□□□□ -0.26
TRIM58-201ENST00000366481 SMIM26A0A096LP01 95 aa13.44□□□□□ -0.26
TRIM58-201ENST00000366481 LINC00167Q96N53 147 aa13.43□□□□□ -0.26
TRIM58-201ENST00000366481 TM2D3Q9BRN9 247 aa13.43□□□□□ -0.26
TRIM58-201ENST00000366481 LYPD5Q6UWN5 251 aa13.43□□□□□ -0.26
TRIM58-201ENST00000366481 PKD1L1Q8TDX9 2849 aa13.4□□□□□ -0.26
TRIM58-201ENST00000366481 TRBV7-6A0A0J9YX20 115 aa13.4□□□□□ -0.26
TRIM58-201ENST00000366481 CHCHD10Q8WYQ3 142 aaPredicted RBP13.39□□□□□ -0.27
TRIM58-201ENST00000366481 DAD1P61803 113 aa13.39□□□□□ -0.27
TRIM58-201ENST00000366481 KLKP1Q107X0 134 aa13.39□□□□□ -0.27
TRIM58-201ENST00000366481 MIFP14174 115 aa13.37□□□□□ -0.27
TRIM58-201ENST00000366481 CMC4P56277 68 aaPredicted RBP13.37□□□□□ -0.27
TRIM58-201ENST00000366481 Q8NDZ9 215 aa13.37□□□□□ -0.27
TRIM58-201ENST00000366481 X6R8D5 127 aa13.37□□□□□ -0.27
TRIM58-201ENST00000366481 C6orf223Q8N319 242 aa13.37□□□□□ -0.27
TRIM58-201ENST00000366481 Q8N9L7 120 aa13.37□□□□□ -0.27
TRIM58-201ENST00000366481 MGAM2Q2M2H8 2515 aa13.37□□□□□ -0.27
TRIM58-201ENST00000366481 UNQ6190/PRO20217Q6UXQ8 127 aa13.37□□□□□ -0.27
TRIM58-201ENST00000366481 C16orf95Q9H693 158 aa13.37□□□□□ -0.27
TRIM58-201ENST00000366481 FP248Q71RG6 208 aaPredicted RBP13.36□□□□□ -0.27
TRIM58-201ENST00000366481 XAGE1AQ9HD64 81 aa13.35□□□□□ -0.27
TRIM58-201ENST00000366481 NREPQ16612 68 aa13.34□□□□□ -0.27
TRIM58-201ENST00000366481 MUC7Q8TAX7 377 aa13.34□□□□□ -0.27
TRIM58-201ENST00000366481 CD164L2Q6UWJ8 174 aa13.34□□□□□ -0.27
TRIM58-201ENST00000366481 COX17Q14061 63 aa13.33□□□□□ -0.28
TRIM58-201ENST00000366481 C10orf25Q5T742 122 aa13.33□□□□□ -0.28
TRIM58-201ENST00000366481 PRO0255Q9UI72 69 aa13.33□□□□□ -0.28
TRIM58-201ENST00000366481 LOC110117498A0A087WWA1 95 aa13.33□□□□□ -0.28
TRIM58-201ENST00000366481 REG3AQ06141 175 aa13.32□□□□□ -0.28
TRIM58-201ENST00000366481 SPAG11BQ08648 103 aa13.32□□□□□ -0.28
TRIM58-201ENST00000366481 BPY2O14599 106 aa13.32□□□□□ -0.28
TRIM58-201ENST00000366481 CELA1Q9UNI1 258 aa13.32□□□□□ -0.28
TRIM58-201ENST00000366481 KIAA0087Q14695 138 aa13.31□□□□□ -0.28
TRIM58-201ENST00000366481 TMEM254Q8TBM7 123 aa13.31□□□□□ -0.28
TRIM58-201ENST00000366481 PDE6GP18545 87 aa13.3□□□□□ -0.28
TRIM58-201ENST00000366481 CXCL6P80162 114 aa13.3□□□□□ -0.28
TRIM58-201ENST00000366481 BCE1O60756 84 aa13.29□□□□□ -0.28
TRIM58-201ENST00000366481 DIRC1Q969H9 104 aa13.29□□□□□ -0.28
TRIM58-201ENST00000366481 NDUFC1O43677 76 aa13.29□□□□□ -0.28
TRIM58-201ENST00000366481 A0A1B0GUV1 79 aa13.28□□□□□ -0.28
TRIM58-201ENST00000366481 IGHV4-28A0A0C4DH34 117 aa13.28□□□□□ -0.28
TRIM58-201ENST00000366481 CYSRT1A8MQ03 144 aa13.26□□□□□ -0.29
TRIM58-201ENST00000366481 LRCOL1A6NCL2 159 aa13.24□□□□□ -0.29
TRIM58-201ENST00000366481 COX7BP24311 80 aa13.24□□□□□ -0.29
TRIM58-201ENST00000366481 BAHCC1Q9P281 2608 aa13.23□□□□□ -0.29
TRIM58-201ENST00000366481 C3orf84H3BNL1 204 aa13.23□□□□□ -0.29
TRIM58-201ENST00000366481 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.23□□□□□ -0.29
TRIM58-201ENST00000366481 KLK12Q9UKR0 248 aa13.23□□□□□ -0.29
TRIM58-201ENST00000366481 EPM2AB3EWF7 344 aa13.22□□□□□ -0.29
TRIM58-201ENST00000366481 FUSP35637 526 aaKnown RBP eCLIP13.22□□□□□ -0.29
TRIM58-201ENST00000366481 TRBV7-4A0A0J9YYF1 115 aa13.21□□□□□ -0.29
TRIM58-201ENST00000366481 ZNF73O43830 326 aaPredicted RBP13.21□□□□□ -0.29
TRIM58-201ENST00000366481 LINC00612Q8N6U2 182 aa13.21□□□□□ -0.29
TRIM58-201ENST00000366481 DEFB105AQ8NG35 78 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms