RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 ADAMTSL4-AS1Q5T5F5 129 aa7.44□□□□□ -1.22
CSNK1E-202ENST00000366216 PPDPFQ9H3Y8 114 aa7.44□□□□□ -1.22
CSNK1E-202ENST00000366216 MEIG1Q5JSS6 88 aa7.43□□□□□ -1.22
CSNK1E-202ENST00000366216 MUSTN1Q8IVN3 82 aa7.43□□□□□ -1.22
CSNK1E-202ENST00000366216 COPS9Q8WXC6 57 aa7.43□□□□□ -1.22
CSNK1E-202ENST00000366216 NHP2Q9NX24 153 aaKnown RBP7.43□□□□□ -1.22
CSNK1E-202ENST00000366216 COX11Q9Y6N1 276 aa7.43□□□□□ -1.22
CSNK1E-202ENST00000366216 KRTAP10-1P60331 282 aa7.42□□□□□ -1.22
CSNK1E-202ENST00000366216 CFAP161Q6P656 301 aa7.42□□□□□ -1.22
CSNK1E-202ENST00000366216 C1orf43Q9BWL3 253 aa7.42□□□□□ -1.22
CSNK1E-202ENST00000366216 PLA2G2DQ9UNK4 145 aa7.42□□□□□ -1.22
CSNK1E-202ENST00000366216 C9orf118A6NHY6 69 aa7.41□□□□□ -1.22
CSNK1E-202ENST00000366216 CKS1BP61024 79 aa7.41□□□□□ -1.22
CSNK1E-202ENST00000366216 Q6ZRN7 208 aaPredicted RBP7.41□□□□□ -1.22
CSNK1E-202ENST00000366216 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.4□□□□□ -1.22
CSNK1E-202ENST00000366216 A4D1N5 150 aa7.4□□□□□ -1.22
CSNK1E-202ENST00000366216 HAMPP81172 84 aa7.4□□□□□ -1.22
CSNK1E-202ENST00000366216 SPAG11BQ08648 103 aa7.4□□□□□ -1.22
CSNK1E-202ENST00000366216 IGKV2D-24A0A075B6R9 120 aa7.39□□□□□ -1.23
CSNK1E-202ENST00000366216 A0A0B4J2C4 111 aa7.39□□□□□ -1.23
CSNK1E-202ENST00000366216 K7ERJ3 54 aa7.39□□□□□ -1.23
CSNK1E-202ENST00000366216 CFC1BP0CG36 223 aa7.39□□□□□ -1.23
CSNK1E-202ENST00000366216 CFC1P0CG37 223 aa7.39□□□□□ -1.23
CSNK1E-202ENST00000366216 LINC00308Q8TCZ7 52 aa7.39□□□□□ -1.23
CSNK1E-202ENST00000366216 RMI2Q96E14 147 aa7.39□□□□□ -1.23
CSNK1E-202ENST00000366216 ERG28Q9UKR5 140 aa7.39□□□□□ -1.23
CSNK1E-202ENST00000366216 F8WDY8 70 aa7.38□□□□□ -1.23
CSNK1E-202ENST00000366216 COX17Q14061 63 aa7.38□□□□□ -1.23
CSNK1E-202ENST00000366216 C2orf82Q6UX34 121 aa7.38□□□□□ -1.23
CSNK1E-202ENST00000366216 NTN5Q8WTR8 489 aaPredicted RBP7.38□□□□□ -1.23
CSNK1E-202ENST00000366216 RAB37Q96AX2 223 aa7.38□□□□□ -1.23
CSNK1E-202ENST00000366216 GVQW2A0A096LPI5 108 aaPredicted RBP7.37□□□□□ -1.23
CSNK1E-202ENST00000366216 LINC00158P58513 81 aa7.37□□□□□ -1.23
CSNK1E-202ENST00000366216 MIR7-3HGQ8N6C7 128 aa7.37□□□□□ -1.23
CSNK1E-202ENST00000366216 DAND5Q8N907 189 aa7.37□□□□□ -1.23
CSNK1E-202ENST00000366216 CDIP1Q9H305 208 aa7.37□□□□□ -1.23
CSNK1E-202ENST00000366216 RNF213Q63HN8 5207 aa7.36□□□□□ -1.23
CSNK1E-202ENST00000366216 A0A0U1RRA0 63 aa7.36□□□□□ -1.23
CSNK1E-202ENST00000366216 SOSTDC1Q6X4U4 206 aa7.36□□□□□ -1.23
CSNK1E-202ENST00000366216 C15orf56Q8N910 161 aa7.36□□□□□ -1.23
CSNK1E-202ENST00000366216 C2orf48Q96LS8 159 aa7.36□□□□□ -1.23
CSNK1E-202ENST00000366216 Q9HAA7 133 aa7.36□□□□□ -1.23
CSNK1E-202ENST00000366216 PRO1854Q9UHT4 67 aa7.36□□□□□ -1.23
CSNK1E-202ENST00000366216 PKHD1L1Q86WI1 4243 aa7.36□□□□□ -1.23
CSNK1E-202ENST00000366216 LOC107984156A0A0G2JMH3 177 aa7.35□□□□□ -1.23
CSNK1E-202ENST00000366216 H3BUT2 72 aa7.35□□□□□ -1.23
CSNK1E-202ENST00000366216 ZNF561-AS1K7EIQ3 104 aa7.35□□□□□ -1.23
CSNK1E-202ENST00000366216 NPC2P61916 151 aa7.35□□□□□ -1.23
CSNK1E-202ENST00000366216 ARL17AQ8IVW1 177 aa7.35□□□□□ -1.23
CSNK1E-202ENST00000366216 A0A1W2PPM0 123 aa7.34□□□□□ -1.23
CSNK1E-202ENST00000366216 PFN2P35080 140 aa7.34□□□□□ -1.23
CSNK1E-202ENST00000366216 UNQ6190/PRO20217Q6UXQ8 127 aa7.34□□□□□ -1.23
CSNK1E-202ENST00000366216 TRBV30A0A0K0K1B3 111 aa7.33□□□□□ -1.24
CSNK1E-202ENST00000366216 PLA2G1BP04054 148 aaKnown RBP7.33□□□□□ -1.24
CSNK1E-202ENST00000366216 VAMP3Q15836 100 aa7.33□□□□□ -1.24
CSNK1E-202ENST00000366216 HIGD2BQ4VC39 106 aa7.33□□□□□ -1.24
CSNK1E-202ENST00000366216 C10orf25Q5T742 122 aa7.33□□□□□ -1.24
CSNK1E-202ENST00000366216 A0A087WTM6 91 aa7.32□□□□□ -1.24
CSNK1E-202ENST00000366216 TSPAN13O95857 204 aa7.32□□□□□ -1.24
CSNK1E-202ENST00000366216 FABP2P12104 132 aa7.32□□□□□ -1.24
CSNK1E-202ENST00000366216 LINC00526Q96FQ7 95 aa7.32□□□□□ -1.24
CSNK1E-202ENST00000366216 CAMK2N2Q96S95 79 aa7.32□□□□□ -1.24
CSNK1E-202ENST00000366216 C6orf48Q9UBA6 75 aa7.32□□□□□ -1.24
CSNK1E-202ENST00000366216 LRP2P98164 4655 aa7.31□□□□□ -1.24
CSNK1E-202ENST00000366216 UBE2V1Q13404 147 aa7.31□□□□□ -1.24
CSNK1E-202ENST00000366216 NAA38Q9BRA0 125 aaKnown RBP7.31□□□□□ -1.24
CSNK1E-202ENST00000366216 SND1-IT1Q9HBX3 110 aa7.31□□□□□ -1.24
CSNK1E-202ENST00000366216 C9orf116Q5BN46 136 aaPredicted RBP7.3□□□□□ -1.24
CSNK1E-202ENST00000366216 TRAV13-2A0A0B4J235 113 aa7.29□□□□□ -1.24
CSNK1E-202ENST00000366216 USP17L23D6RBM5 183 aa7.29□□□□□ -1.24
CSNK1E-202ENST00000366216 K7EP34 96 aa7.29□□□□□ -1.24
CSNK1E-202ENST00000366216 NDUFC2O95298 119 aa7.29□□□□□ -1.24
CSNK1E-202ENST00000366216 RNF151Q2KHN1 245 aa7.29□□□□□ -1.24
CSNK1E-202ENST00000366216 LYRM7Q5U5X0 104 aa7.29□□□□□ -1.24
CSNK1E-202ENST00000366216 Q6ZRU5 148 aa7.29□□□□□ -1.24
CSNK1E-202ENST00000366216 GTF2H5Q6ZYL4 71 aa7.29□□□□□ -1.24
CSNK1E-202ENST00000366216 SPCS1Q9Y6A9 102 aa7.29□□□□□ -1.24
CSNK1E-202ENST00000366216 GAGE10A6NGK3 116 aa7.28□□□□□ -1.24
CSNK1E-202ENST00000366216 OXTP01178 125 aa7.28□□□□□ -1.24
CSNK1E-202ENST00000366216 SYCNQ0VAF6 134 aa7.28□□□□□ -1.24
CSNK1E-202ENST00000366216 SVIPQ8NHG7 77 aa7.28□□□□□ -1.24
CSNK1E-202ENST00000366216 FAM30AQ9NZY2 134 aa7.28□□□□□ -1.24
CSNK1E-202ENST00000366216 IGKV2-28A0A075B6P5 120 aa7.27□□□□□ -1.25
CSNK1E-202ENST00000366216 IGKV2D-28P01615 120 aa7.27□□□□□ -1.25
CSNK1E-202ENST00000366216 RPL13AP40429 203 aaKnown RBP7.27□□□□□ -1.25
CSNK1E-202ENST00000366216 Q1RN00 199 aa7.27□□□□□ -1.25
CSNK1E-202ENST00000366216 IGLV5-52A0A0A0MRZ9 124 aa7.26□□□□□ -1.25
CSNK1E-202ENST00000366216 NDUFC2-KCTD14E9PQ53 114 aa7.26□□□□□ -1.25
CSNK1E-202ENST00000366216 H7C2G1 150 aa7.25□□□□□ -1.25
CSNK1E-202ENST00000366216 PSCAO43653 123 aa7.25□□□□□ -1.25
CSNK1E-202ENST00000366216 TLX1NBP0CAT3 122 aa7.25□□□□□ -1.25
CSNK1E-202ENST00000366216 PSMB2P49721 201 aa7.25□□□□□ -1.25
CSNK1E-202ENST00000366216 CARD19Q96LW7 228 aa7.25□□□□□ -1.25
CSNK1E-202ENST00000366216 TNXBP22105 4242 aa7.25□□□□□ -1.25
CSNK1E-202ENST00000366216 TRBV20-1A0A075B6N2 111 aa7.24□□□□□ -1.25
CSNK1E-202ENST00000366216 SLPIP03973 132 aa7.24□□□□□ -1.25
CSNK1E-202ENST00000366216 SCGB1C2P0DMR2 95 aa7.24□□□□□ -1.25
CSNK1E-202ENST00000366216 C14orf177Q52M58 125 aa7.24□□□□□ -1.25
CSNK1E-202ENST00000366216 LINC00337Q8N6G1 96 aa7.24□□□□□ -1.25
CSNK1E-202ENST00000366216 TRIAP1O43715 76 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms