RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 PRO0461Q9UI25 63 aa11.01□□□□□ -0.65
COL18A1-203ENST00000359759 HIVEP3Q5T1R4 2406 aa11.01□□□□□ -0.65
COL18A1-203ENST00000359759 TRAV22A0A0B4J277 110 aa11.01□□□□□ -0.65
COL18A1-203ENST00000359759 VPREB1P12018 145 aa11.01□□□□□ -0.65
COL18A1-203ENST00000359759 EPM2AB3EWF7 344 aa11□□□□□ -0.65
COL18A1-203ENST00000359759 NAV3Q8IVL0 2385 aa11□□□□□ -0.65
COL18A1-203ENST00000359759 RPS28P62857 69 aaKnown RBP10.99□□□□□ -0.65
COL18A1-203ENST00000359759 LINC00315P59091 139 aa10.98□□□□□ -0.65
COL18A1-203ENST00000359759 Q6ZRX8 168 aa10.97□□□□□ -0.65
COL18A1-203ENST00000359759 TYMSOSQ8TAI1 123 aa10.97□□□□□ -0.65
COL18A1-203ENST00000359759 LOC110117498A0A087WWA1 95 aa10.97□□□□□ -0.65
COL18A1-203ENST00000359759 Q8NBF4 154 aa10.97□□□□□ -0.65
COL18A1-203ENST00000359759 FAM19A4Q96LR4 140 aa10.96□□□□□ -0.65
COL18A1-203ENST00000359759 A8MUN3 132 aa10.96□□□□□ -0.66
COL18A1-203ENST00000359759 ANKHD1Q8IWZ3 2542 aaKnown RBP10.96□□□□□ -0.66
COL18A1-203ENST00000359759 BCE1O60756 84 aa10.96□□□□□ -0.66
COL18A1-203ENST00000359759 APLNQ9ULZ1 77 aa10.94□□□□□ -0.66
COL18A1-203ENST00000359759 RTL8CO15255 209 aa10.94□□□□□ -0.66
COL18A1-203ENST00000359759 COA5Q86WW8 74 aa10.94□□□□□ -0.66
COL18A1-203ENST00000359759 H3BPC8 53 aa10.93□□□□□ -0.66
COL18A1-203ENST00000359759 LINC01600Q96MT4 127 aa10.93□□□□□ -0.66
COL18A1-203ENST00000359759 NCOR2Q9Y618 2525 aa10.93□□□□□ -0.66
COL18A1-203ENST00000359759 FAM168BA1KXE4 195 aa10.92□□□□□ -0.66
COL18A1-203ENST00000359759 TRBV7-4A0A0J9YYF1 115 aa10.92□□□□□ -0.66
COL18A1-203ENST00000359759 K7EQZ3 153 aa10.92□□□□□ -0.66
COL18A1-203ENST00000359759 IGLV5-45A0A087WSX0 123 aa10.9□□□□□ -0.66
COL18A1-203ENST00000359759 NHLRC4P0CG21 123 aaPredicted RBP10.89□□□□□ -0.67
COL18A1-203ENST00000359759 CACNA1AO00555 2505 aa10.87□□□□□ -0.67
COL18A1-203ENST00000359759 PTPRBP23467 1997 aa10.86□□□□□ -0.67
COL18A1-203ENST00000359759 C16orf90A8MZG2 172 aa10.86□□□□□ -0.67
COL18A1-203ENST00000359759 Q6ZRP5 223 aa10.85□□□□□ -0.67
COL18A1-203ENST00000359759 PIEZO1Q92508 2521 aa10.85□□□□□ -0.67
COL18A1-203ENST00000359759 A8MWP4 228 aa10.85□□□□□ -0.67
COL18A1-203ENST00000359759 A0A1B0GW54 56 aa10.84□□□□□ -0.67
COL18A1-203ENST00000359759 FAM229AH3BQW9 127 aa10.84□□□□□ -0.67
COL18A1-203ENST00000359759 IGF2RP11717 2491 aa10.83□□□□□ -0.68
COL18A1-203ENST00000359759 LOC101927531A0A1B0GV80 90 aa10.83□□□□□ -0.68
COL18A1-203ENST00000359759 DSCR10P59022 87 aa10.83□□□□□ -0.68
COL18A1-203ENST00000359759 COL27A1Q8IZC6 1860 aaPredicted RBP10.82□□□□□ -0.68
COL18A1-203ENST00000359759 MRPL34Q9BQ48 92 aaKnown RBP10.82□□□□□ -0.68
COL18A1-203ENST00000359759 CCDC168Q8NDH2 2452 aa10.82□□□□□ -0.68
COL18A1-203ENST00000359759 EP400Q96L91 3159 aa10.81□□□□□ -0.68
COL18A1-203ENST00000359759 LINC00588Q9Y4M8 146 aa10.81□□□□□ -0.68
COL18A1-203ENST00000359759 CRIPTQ9P021 101 aa10.8□□□□□ -0.68
COL18A1-203ENST00000359759 MIR22HGQ0VDD5 57 aa10.8□□□□□ -0.68
COL18A1-203ENST00000359759 UQCR11O14957 56 aa10.8□□□□□ -0.68
COL18A1-203ENST00000359759 NBDYA0A0U1RRE5 68 aa10.78□□□□□ -0.68
COL18A1-203ENST00000359759 IGLV6-57P01721 117 aa10.78□□□□□ -0.68
COL18A1-203ENST00000359759 LITAFQ99732 161 aa10.78□□□□□ -0.68
COL18A1-203ENST00000359759 ABCA2Q9BZC7 2435 aa10.77□□□□□ -0.68
COL18A1-203ENST00000359759 C9orf92A6NGG3 77 aa10.77□□□□□ -0.69
COL18A1-203ENST00000359759 DOPEY1Q5JWR5 2465 aa10.77□□□□□ -0.69
COL18A1-203ENST00000359759 C2CD3Q4AC94 2353 aa10.77□□□□□ -0.69
COL18A1-203ENST00000359759 SRCAPQ6ZRS2 3230 aa10.77□□□□□ -0.69
COL18A1-203ENST00000359759 A0A0G2JQZ4 141 aa10.76□□□□□ -0.69
COL18A1-203ENST00000359759 A0A1W2PNN7 141 aa10.76□□□□□ -0.69
COL18A1-203ENST00000359759 GVQW2A0A096LPI5 108 aaPredicted RBP10.75□□□□□ -0.69
COL18A1-203ENST00000359759 CYP4F30PQ9H0H9 118 aa10.75□□□□□ -0.69
COL18A1-203ENST00000359759 H3BNG1 76 aa10.74□□□□□ -0.69
COL18A1-203ENST00000359759 NAV2Q8IVL1 2488 aa10.73□□□□□ -0.69
COL18A1-203ENST00000359759 PIEZO2Q9H5I5 2752 aa10.72□□□□□ -0.69
COL18A1-203ENST00000359759 J3QL48 77 aa10.72□□□□□ -0.69
COL18A1-203ENST00000359759 C9orf129Q5T035 196 aaKnown RBP10.71□□□□□ -0.69
COL18A1-203ENST00000359759 IGFL1Q6UW32 110 aa10.71□□□□□ -0.69
COL18A1-203ENST00000359759 COX6B2Q6YFQ2 88 aa10.71□□□□□ -0.69
COL18A1-203ENST00000359759 Q8NAQ8 132 aa10.71□□□□□ -0.69
COL18A1-203ENST00000359759 OBSCN-AS1Q96MR7 158 aa10.71□□□□□ -0.69
COL18A1-203ENST00000359759 IGLV1-50A0A075B6I6 118 aa10.69□□□□□ -0.7
COL18A1-203ENST00000359759 ERC2-IT1O76042 136 aa10.68□□□□□ -0.7
COL18A1-203ENST00000359759 LINC00336Q6ZUF6 198 aa10.68□□□□□ -0.7
COL18A1-203ENST00000359759 A0A0D9SG42 100 aa10.68□□□□□ -0.7
COL18A1-203ENST00000359759 C8orf17Q9NRJ1 99 aa10.68□□□□□ -0.7
COL18A1-203ENST00000359759 C10orf142B7Z368 130 aa10.67□□□□□ -0.7
COL18A1-203ENST00000359759 LINC01554Q52M75 96 aa10.65□□□□□ -0.7
COL18A1-203ENST00000359759 EIF4EBP3O60516 100 aaPredicted RBP10.65□□□□□ -0.7
COL18A1-203ENST00000359759 DNAH10OSP0CZ25 163 aa10.65□□□□□ -0.7
COL18A1-203ENST00000359759 KRTAP24-1Q3LI83 254 aa10.63□□□□□ -0.71
COL18A1-203ENST00000359759 PRR15Q8IV56 129 aa10.63□□□□□ -0.71
COL18A1-203ENST00000359759 ANAPC11Q9NYG5 84 aa10.63□□□□□ -0.71
COL18A1-203ENST00000359759 MYO18BQ8IUG5 2567 aa10.62□□□□□ -0.71
COL18A1-203ENST00000359759 KTN1-AS1Q86SY8 53 aa10.62□□□□□ -0.71
COL18A1-203ENST00000359759 A0A1B0GVX0 72 aa10.61□□□□□ -0.71
COL18A1-203ENST00000359759 CD164Q04900 197 aa10.61□□□□□ -0.71
COL18A1-203ENST00000359759 KCNQ1DNQ9H478 68 aa10.6□□□□□ -0.71
COL18A1-203ENST00000359759 LINC00528Q8N1L1 170 aa10.59□□□□□ -0.71
COL18A1-203ENST00000359759 Q8N377 158 aa10.58□□□□□ -0.72
COL18A1-203ENST00000359759 LCA10Q71F78 164 aa10.57□□□□□ -0.72
COL18A1-203ENST00000359759 LINC00304Q8N9R0 145 aa10.57□□□□□ -0.72
COL18A1-203ENST00000359759 H7BZZ5 65 aa10.56□□□□□ -0.72
COL18A1-203ENST00000359759 C15orf56Q8N910 161 aa10.56□□□□□ -0.72
COL18A1-203ENST00000359759 KLKP1Q107X0 134 aa10.56□□□□□ -0.72
COL18A1-203ENST00000359759 Q8N1X5 172 aa10.55□□□□□ -0.72
COL18A1-203ENST00000359759 CDC42SE1Q9NRR8 79 aa10.54□□□□□ -0.72
COL18A1-203ENST00000359759 IGLV5-37A0A075B6J1 123 aa10.54□□□□□ -0.72
COL18A1-203ENST00000359759 COL4A2P08572 1712 aa10.54□□□□□ -0.72
COL18A1-203ENST00000359759 SMR3BP02814 79 aaPredicted RBP10.52□□□□□ -0.73
COL18A1-203ENST00000359759 JMJD1CQ15652 2540 aa10.51□□□□□ -0.73
COL18A1-203ENST00000359759 IGLV5-48A0A075B6I7 105 aa10.49□□□□□ -0.73
COL18A1-203ENST00000359759 ZFYVE26Q68DK2 2539 aa10.49□□□□□ -0.73
COL18A1-203ENST00000359759 LRRK2Q5S007 2527 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms