RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 BCE1O60756 84 aa3.99□□□□□ -1.77
BRCA1-203ENST00000357654 ADAMTSL4-AS1Q5T5F5 129 aa3.99□□□□□ -1.77
BRCA1-203ENST00000357654 ZNF295-AS1Q8N0V1 137 aa3.98□□□□□ -1.77
BRCA1-203ENST00000357654 Q8N1X5 172 aa3.98□□□□□ -1.77
BRCA1-203ENST00000357654 IGHV3OR16-9A0A0B4J2B5 98 aa3.98□□□□□ -1.77
BRCA1-203ENST00000357654 PLXNA2O75051 1894 aa3.98□□□□□ -1.77
BRCA1-203ENST00000357654 FAM208BQ5VWN6 2430 aa3.98□□□□□ -1.77
BRCA1-203ENST00000357654 CACNA1AO00555 2505 aa3.98□□□□□ -1.77
BRCA1-203ENST00000357654 C10orf91Q5T1B1 145 aa3.98□□□□□ -1.77
BRCA1-203ENST00000357654 TNRC18O15417 2968 aaPredicted RBP3.98□□□□□ -1.77
BRCA1-203ENST00000357654 CHD8Q9HCK8 2581 aa3.97□□□□□ -1.77
BRCA1-203ENST00000357654 NUP210LQ5VU65 1888 aa3.97□□□□□ -1.77
BRCA1-203ENST00000357654 NUP210Q8TEM1 1887 aaPredicted RBP3.97□□□□□ -1.77
BRCA1-203ENST00000357654 C8orf17Q9NRJ1 99 aa3.96□□□□□ -1.78
BRCA1-203ENST00000357654 CXCL6P80162 114 aa3.96□□□□□ -1.78
BRCA1-203ENST00000357654 RIF1Q5UIP0 2472 aaKnown RBP3.96□□□□□ -1.78
BRCA1-203ENST00000357654 TSPEAR-AS2P59090 65 aa3.96□□□□□ -1.78
BRCA1-203ENST00000357654 DNAH12Q6ZR08 3092 aa3.95□□□□□ -1.78
BRCA1-203ENST00000357654 WIPF1O43516 503 aa3.95□□□□□ -1.78
BRCA1-203ENST00000357654 C11orf1Q9H5F2 150 aa3.95□□□□□ -1.78
BRCA1-203ENST00000357654 YPEL4Q96NS1 127 aa3.95□□□□□ -1.78
BRCA1-203ENST00000357654 LINC00574Q9H8X3 128 aa3.95□□□□□ -1.78
BRCA1-203ENST00000357654 Q6ZPA2 131 aa3.94□□□□□ -1.78
BRCA1-203ENST00000357654 TANC1Q9C0D5 1861 aa3.94□□□□□ -1.78
BRCA1-203ENST00000357654 SPENQ96T58 3664 aaKnown RBP3.94□□□□□ -1.78
BRCA1-203ENST00000357654 A0A1B0GUV1 79 aa3.94□□□□□ -1.78
BRCA1-203ENST00000357654 CDC42SE1Q9NRR8 79 aa3.94□□□□□ -1.78
BRCA1-203ENST00000357654 LINC00846Q9NV44 126 aa3.94□□□□□ -1.78
BRCA1-203ENST00000357654 CEP350Q5VT06 3117 aa3.94□□□□□ -1.78
BRCA1-203ENST00000357654 MIR22HGQ0VDD5 57 aa3.94□□□□□ -1.78
BRCA1-203ENST00000357654 MRPL34Q9BQ48 92 aaKnown RBP3.94□□□□□ -1.78
BRCA1-203ENST00000357654 AGRNO00468 2067 aa3.94□□□□□ -1.78
BRCA1-203ENST00000357654 ZFHX2Q9C0A1 2572 aaPredicted RBP3.94□□□□□ -1.78
BRCA1-203ENST00000357654 IGLV7-46A0A075B6I9 117 aa3.94□□□□□ -1.78
BRCA1-203ENST00000357654 XIRP2A4UGR9 3374 aa3.93□□□□□ -1.78
BRCA1-203ENST00000357654 COL4A2P08572 1712 aa3.93□□□□□ -1.78
BRCA1-203ENST00000357654 IGIPA6NJ69 53 aa3.93□□□□□ -1.78
BRCA1-203ENST00000357654 KIAA1549LQ6ZVL6 1849 aa3.93□□□□□ -1.78
BRCA1-203ENST00000357654 PTPN13Q12923 2485 aa3.93□□□□□ -1.78
BRCA1-203ENST00000357654 ARHGAP32A7KAX9 2087 aa3.93□□□□□ -1.78
BRCA1-203ENST00000357654 A0A0G2JQZ4 141 aa3.93□□□□□ -1.78
BRCA1-203ENST00000357654 A0A1W2PNN7 141 aa3.93□□□□□ -1.78
BRCA1-203ENST00000357654 HIVEP3Q5T1R4 2406 aa3.92□□□□□ -1.78
BRCA1-203ENST00000357654 MUC6Q6W4X9 2439 aa3.92□□□□□ -1.78
BRCA1-203ENST00000357654 ANAPC1Q9H1A4 1944 aa3.92□□□□□ -1.78
BRCA1-203ENST00000357654 CHD7Q9P2D1 2997 aa3.92□□□□□ -1.78
BRCA1-203ENST00000357654 Q6ZRX8 168 aa3.92□□□□□ -1.78
BRCA1-203ENST00000357654 PRO3102Q9H379 93 aa3.92□□□□□ -1.78
BRCA1-203ENST00000357654 LOC101927531A0A1B0GV80 90 aa3.91□□□□□ -1.78
BRCA1-203ENST00000357654 UQCR11O14957 56 aa3.91□□□□□ -1.78
BRCA1-203ENST00000357654 COA5Q86WW8 74 aa3.91□□□□□ -1.78
BRCA1-203ENST00000357654 TECTAO75443 2155 aa3.91□□□□□ -1.78
BRCA1-203ENST00000357654 RPS28P62857 69 aaKnown RBP3.91□□□□□ -1.78
BRCA1-203ENST00000357654 PLXNB1O43157 2135 aa3.9□□□□□ -1.78
BRCA1-203ENST00000357654 SONP18583 2426 aaKnown RBP3.9□□□□□ -1.78
BRCA1-203ENST00000357654 A0A1W2PPR1 153 aa3.9□□□□□ -1.78
BRCA1-203ENST00000357654 PRR26Q8N8Z3 221 aa3.9□□□□□ -1.78
BRCA1-203ENST00000357654 PCNX3Q9H6A9 2034 aa3.9□□□□□ -1.78
BRCA1-203ENST00000357654 K7EIL1 84 aa3.9□□□□□ -1.78
BRCA1-203ENST00000357654 DENND4CQ5VZ89 1909 aa3.9□□□□□ -1.78
BRCA1-203ENST00000357654 LITAFQ99732 161 aa3.9□□□□□ -1.79
BRCA1-203ENST00000357654 KRTAP10-11P60412 298 aa3.9□□□□□ -1.79
BRCA1-203ENST00000357654 C15orf56Q8N910 161 aa3.89□□□□□ -1.79
BRCA1-203ENST00000357654 SPG11Q96JI7 2443 aa3.89□□□□□ -1.79
BRCA1-203ENST00000357654 ELOF1P60002 83 aaKnown RBP3.89□□□□□ -1.79
BRCA1-203ENST00000357654 MKI67P46013 3256 aaKnown RBP3.89□□□□□ -1.79
BRCA1-203ENST00000357654 C11orf72Q8NBR9 251 aa3.89□□□□□ -1.79
BRCA1-203ENST00000357654 PCDH15Q96QU1 1955 aa3.89□□□□□ -1.79
BRCA1-203ENST00000357654 HCFC1P51610 2035 aa3.89□□□□□ -1.79
BRCA1-203ENST00000357654 A8MWP4 228 aa3.89□□□□□ -1.79
BRCA1-203ENST00000357654 ABCA2Q9BZC7 2435 aa3.88□□□□□ -1.79
BRCA1-203ENST00000357654 CSPG4Q6UVK1 2322 aa3.88□□□□□ -1.79
BRCA1-203ENST00000357654 A0A087WTM6 91 aa3.88□□□□□ -1.79
BRCA1-203ENST00000357654 DOPEY1Q5JWR5 2465 aa3.88□□□□□ -1.79
BRCA1-203ENST00000357654 LAMA2P24043 3122 aaKnown RBP3.88□□□□□ -1.79
BRCA1-203ENST00000357654 C2orf91Q6ZV80 131 aa3.88□□□□□ -1.79
BRCA1-203ENST00000357654 GPR179Q6PRD1 2367 aa3.88□□□□□ -1.79
BRCA1-203ENST00000357654 TRBV7-4A0A0J9YYF1 115 aa3.88□□□□□ -1.79
BRCA1-203ENST00000357654 C4orf26Q17RF5 130 aa3.88□□□□□ -1.79
BRCA1-203ENST00000357654 PLXNB3Q9ULL4 1909 aa3.88□□□□□ -1.79
BRCA1-203ENST00000357654 DMDP11532 3685 aa3.87□□□□□ -1.79
BRCA1-203ENST00000357654 ZNF861PO60384 105 aa3.87□□□□□ -1.79
BRCA1-203ENST00000357654 HRES1P13985 223 aa3.87□□□□□ -1.79
BRCA1-203ENST00000357654 AMELXQ99217 191 aa3.87□□□□□ -1.79
BRCA1-203ENST00000357654 ACACBO00763 2458 aa3.87□□□□□ -1.79
BRCA1-203ENST00000357654 SZT2Q5T011 3432 aa3.86□□□□□ -1.79
BRCA1-203ENST00000357654 PRUNE2Q8WUY3 3088 aa3.86□□□□□ -1.79
BRCA1-203ENST00000357654 IGLV7-43P04211 117 aa3.86□□□□□ -1.79
BRCA1-203ENST00000357654 LINC01561Q8N1V8 128 aa3.86□□□□□ -1.79
BRCA1-203ENST00000357654 ALPK3Q96L96 1907 aa3.86□□□□□ -1.79
BRCA1-203ENST00000357654 NOTCH4Q99466 2003 aa3.86□□□□□ -1.79
BRCA1-203ENST00000357654 H1FX-AS1Q4G0G2 97 aa3.85□□□□□ -1.79
BRCA1-203ENST00000357654 CCDC168Q8NDH2 2452 aa3.85□□□□□ -1.79
BRCA1-203ENST00000357654 C9orf163Q8N9P6 203 aa3.85□□□□□ -1.79
BRCA1-203ENST00000357654 A8MUN3 132 aa3.85□□□□□ -1.79
BRCA1-203ENST00000357654 ERC2-IT1O76042 136 aa3.85□□□□□ -1.79
BRCA1-203ENST00000357654 CDH23Q9H251 3354 aa3.85□□□□□ -1.79
BRCA1-203ENST00000357654 PTPRSQ13332 1948 aa3.84□□□□□ -1.79
BRCA1-203ENST00000357654 Q8NAQ8 132 aa3.84□□□□□ -1.79
BRCA1-203ENST00000357654 KTN1-AS1Q86SY8 53 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms