RNA–Protein interactions for RNA: ENST00000357517.6

PCDH1-202, Transcript of protocadherin 1, humanhuman

TSL 2

Gene PCDH1, Length 3,307 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-202ENST00000357517 UBE2BP63146 152 aa7.16□□□□□ -1.26
PCDH1-202ENST00000357517 SYCNQ0VAF6 134 aa7.16□□□□□ -1.26
PCDH1-202ENST00000357517 KLK9Q2XQG4 91 aa7.16□□□□□ -1.26
PCDH1-202ENST00000357517 Q1T7F1 81 aa7.16□□□□□ -1.26
PCDH1-202ENST00000357517 ZANQ9Y493 2812 aa7.16□□□□□ -1.26
PCDH1-202ENST00000357517 LINC00588Q9Y4M8 146 aa7.16□□□□□ -1.26
PCDH1-202ENST00000357517 CENPEQ02224 2701 aa7.15□□□□□ -1.26
PCDH1-202ENST00000357517 NF1P21359 2839 aa7.15□□□□□ -1.26
PCDH1-202ENST00000357517 LOC110117498A0A087WWA1 95 aa7.15□□□□□ -1.26
PCDH1-202ENST00000357517 OCR1Q9BZK8 76 aa7.15□□□□□ -1.26
PCDH1-202ENST00000357517 POLQO75417 2590 aa7.15□□□□□ -1.26
PCDH1-202ENST00000357517 C18orf65Q6ZTR6 163 aa7.15□□□□□ -1.27
PCDH1-202ENST00000357517 C11orf44Q8N8P7 122 aa7.15□□□□□ -1.27
PCDH1-202ENST00000357517 DEFB105AQ8NG35 78 aa7.15□□□□□ -1.27
PCDH1-202ENST00000357517 ZNF73O43830 326 aaPredicted RBP7.14□□□□□ -1.27
PCDH1-202ENST00000357517 C8orf87E5RJ46 101 aa7.14□□□□□ -1.27
PCDH1-202ENST00000357517 PKD1L2Q7Z442 2459 aa7.14□□□□□ -1.27
PCDH1-202ENST00000357517 LINC00959A0A1B0GUT2 108 aa7.14□□□□□ -1.27
PCDH1-202ENST00000357517 XAGE1AQ9HD64 81 aa7.14□□□□□ -1.27
PCDH1-202ENST00000357517 IGKV4-1P06312 121 aa7.13□□□□□ -1.27
PCDH1-202ENST00000357517 DEFB116Q30KQ4 102 aa7.13□□□□□ -1.27
PCDH1-202ENST00000357517 ABCA2Q9BZC7 2435 aa7.13□□□□□ -1.27
PCDH1-202ENST00000357517 EPG5Q9HCE0 2579 aa7.13□□□□□ -1.27
PCDH1-202ENST00000357517 NAV2Q8IVL1 2488 aa7.13□□□□□ -1.27
PCDH1-202ENST00000357517 A0A1W2PPR1 153 aa7.12□□□□□ -1.27
PCDH1-202ENST00000357517 TEX15Q9BXT5 2789 aa7.12□□□□□ -1.27
PCDH1-202ENST00000357517 ZNF462Q96JM2 2506 aa7.12□□□□□ -1.27
PCDH1-202ENST00000357517 IGLV1-40P01703 118 aa7.12□□□□□ -1.27
PCDH1-202ENST00000357517 GCN1Q92616 2671 aaKnown RBP7.12□□□□□ -1.27
PCDH1-202ENST00000357517 LMO4P61968 165 aa7.12□□□□□ -1.27
PCDH1-202ENST00000357517 LINC00612Q8N6U2 182 aa7.11□□□□□ -1.27
PCDH1-202ENST00000357517 HIVEP3Q5T1R4 2406 aa7.11□□□□□ -1.27
PCDH1-202ENST00000357517 DIRC1Q969H9 104 aa7.11□□□□□ -1.27
PCDH1-202ENST00000357517 PRR15LQ9BU68 103 aa7.11□□□□□ -1.27
PCDH1-202ENST00000357517 C16orf90A8MZG2 172 aa7.1□□□□□ -1.27
PCDH1-202ENST00000357517 HCG22E2RYF7 251 aa7.1□□□□□ -1.27
PCDH1-202ENST00000357517 DEFB130BP0DP73 79 aa7.1□□□□□ -1.27
PCDH1-202ENST00000357517 DEFB130AP0DP74 79 aa7.1□□□□□ -1.27
PCDH1-202ENST00000357517 NBPF19A0A087WUL8 3843 aa7.09□□□□□ -1.27
PCDH1-202ENST00000357517 A6NED7 52 aa7.09□□□□□ -1.27
PCDH1-202ENST00000357517 IGHV4-59P01825 116 aa7.09□□□□□ -1.27
PCDH1-202ENST00000357517 HIGD2BQ4VC39 106 aa7.09□□□□□ -1.27
PCDH1-202ENST00000357517 MAP6D1Q9H9H5 199 aa7.09□□□□□ -1.27
PCDH1-202ENST00000357517 TRBV6-8A0A0A6YYG3 113 aa7.09□□□□□ -1.27
PCDH1-202ENST00000357517 H3BUA1 57 aa7.09□□□□□ -1.27
PCDH1-202ENST00000357517 PDE6GP18545 87 aa7.09□□□□□ -1.27
PCDH1-202ENST00000357517 MDFIQ99750 246 aa7.09□□□□□ -1.27
PCDH1-202ENST00000357517 LYRM9A8MSI8 78 aa7.09□□□□□ -1.28
PCDH1-202ENST00000357517 NDUFS5O43920 106 aa7.09□□□□□ -1.28
PCDH1-202ENST00000357517 UNQ6190/PRO20217Q6UXQ8 127 aa7.08□□□□□ -1.28
PCDH1-202ENST00000357517 AKAP9Q99996 3911 aa7.08□□□□□ -1.28
PCDH1-202ENST00000357517 ESM1Q9NQ30 184 aa7.08□□□□□ -1.28
PCDH1-202ENST00000357517 ACACBO00763 2458 aa7.08□□□□□ -1.28
PCDH1-202ENST00000357517 PSCAO43653 123 aa7.07□□□□□ -1.28
PCDH1-202ENST00000357517 UBE2AP49459 152 aa7.07□□□□□ -1.28
PCDH1-202ENST00000357517 ERC2-IT1O76042 136 aa7.07□□□□□ -1.28
PCDH1-202ENST00000357517 ST20-AS1Q8NBB2 130 aa7.07□□□□□ -1.28
PCDH1-202ENST00000357517 A6NDX4 124 aa7.07□□□□□ -1.28
PCDH1-202ENST00000357517 Q5VV11 94 aa7.07□□□□□ -1.28
PCDH1-202ENST00000357517 C11orf71Q6IPW1 123 aa7.07□□□□□ -1.28
PCDH1-202ENST00000357517 DNAJC9-AS1A6NH13 148 aa7.06□□□□□ -1.28
PCDH1-202ENST00000357517 CACNA1AO00555 2505 aa7.06□□□□□ -1.28
PCDH1-202ENST00000357517 LRRK2Q5S007 2527 aa7.06□□□□□ -1.28
PCDH1-202ENST00000357517 COX7BP24311 80 aa7.06□□□□□ -1.28
PCDH1-202ENST00000357517 Q8IZM0 81 aa7.06□□□□□ -1.28
PCDH1-202ENST00000357517 C9orf66Q5T8R8 295 aa7.05□□□□□ -1.28
PCDH1-202ENST00000357517 IGHV4-61A0A0C4DH41 118 aa7.04□□□□□ -1.28
PCDH1-202ENST00000357517 ANGP03950 147 aaKnown RBP7.04□□□□□ -1.28
PCDH1-202ENST00000357517 WFDC10AQ9H1F0 79 aa7.04□□□□□ -1.28
PCDH1-202ENST00000357517 CFAP46Q8IYW2 2715 aa7.04□□□□□ -1.28
PCDH1-202ENST00000357517 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.04□□□□□ -1.28
PCDH1-202ENST00000357517 CCDC168Q8NDH2 2452 aa7.03□□□□□ -1.28
PCDH1-202ENST00000357517 MXRA5Q9NR99 2828 aa7.03□□□□□ -1.28
PCDH1-202ENST00000357517 MAPK1IP1LQ8NDC0 245 aa7.03□□□□□ -1.28
PCDH1-202ENST00000357517 MTORP42345 2549 aa7.03□□□□□ -1.28
PCDH1-202ENST00000357517 ATP11AUNQ6ZP68 121 aa7.02□□□□□ -1.29
PCDH1-202ENST00000357517 SETXQ7Z333 2677 aaKnown RBP7.02□□□□□ -1.29
PCDH1-202ENST00000357517 GYPEP15421 78 aa7.02□□□□□ -1.29
PCDH1-202ENST00000357517 WFDC13Q8IUB5 93 aa7.02□□□□□ -1.29
PCDH1-202ENST00000357517 CHCHD10Q8WYQ3 142 aaPredicted RBP7.02□□□□□ -1.29
PCDH1-202ENST00000357517 UTP20O75691 2785 aaKnown RBP7.02□□□□□ -1.29
PCDH1-202ENST00000357517 A0A0J9YWU9 116 aa7.01□□□□□ -1.29
PCDH1-202ENST00000357517 C7orf65Q6ZTY9 151 aa7.01□□□□□ -1.29
PCDH1-202ENST00000357517 DEFB112Q30KQ8 113 aa7.01□□□□□ -1.29
PCDH1-202ENST00000357517 LCA10Q71F78 164 aa7.01□□□□□ -1.29
PCDH1-202ENST00000357517 PRR26Q8N8Z3 221 aa7□□□□□ -1.29
PCDH1-202ENST00000357517 LINC00208Q96KT6 92 aa7□□□□□ -1.29
PCDH1-202ENST00000357517 PHF5AQ7RTV0 110 aaKnown RBP7□□□□□ -1.29
PCDH1-202ENST00000357517 FSHBP01225 129 aa6.99□□□□□ -1.29
PCDH1-202ENST00000357517 SPAG11BQ08648 103 aa6.99□□□□□ -1.29
PCDH1-202ENST00000357517 KIAA0087Q14695 138 aa6.99□□□□□ -1.29
PCDH1-202ENST00000357517 ODF3L2Q3SX64 289 aa6.99□□□□□ -1.29
PCDH1-202ENST00000357517 WFDC10BQ8IUB3 73 aa6.99□□□□□ -1.29
PCDH1-202ENST00000357517 NKAPP1Q8N9T2 125 aa6.99□□□□□ -1.29
PCDH1-202ENST00000357517 CYSRT1A8MQ03 144 aa6.99□□□□□ -1.29
PCDH1-202ENST00000357517 ETDCA0A1B0GVM5 59 aa6.98□□□□□ -1.29
PCDH1-202ENST00000357517 B9D2Q9BPU9 175 aa6.98□□□□□ -1.29
PCDH1-202ENST00000357517 A6NN06 94 aa6.98□□□□□ -1.29
PCDH1-202ENST00000357517 K7EQZ3 153 aa6.98□□□□□ -1.29
PCDH1-202ENST00000357517 FBXL19-AS1Q494R0 122 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms