RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 HCFC1P51610 2035 aa8.89□□□□□ -0.99
SMC4-202ENST00000357388 LINC00167Q96N53 147 aa8.89□□□□□ -0.99
SMC4-202ENST00000357388 PCDH15Q96QU1 1955 aa8.88□□□□□ -0.99
SMC4-202ENST00000357388 A8MUN3 132 aa8.88□□□□□ -0.99
SMC4-202ENST00000357388 LINC00315P59091 139 aa8.88□□□□□ -0.99
SMC4-202ENST00000357388 COA5Q86WW8 74 aa8.88□□□□□ -0.99
SMC4-202ENST00000357388 TRBV7-4A0A0J9YYF1 115 aa8.88□□□□□ -0.99
SMC4-202ENST00000357388 Q6ZRX8 168 aa8.88□□□□□ -0.99
SMC4-202ENST00000357388 LCA10Q71F78 164 aa8.88□□□□□ -0.99
SMC4-202ENST00000357388 LINC00476Q8WZB0 136 aa8.88□□□□□ -0.99
SMC4-202ENST00000357388 KTN1-AS1Q86SY8 53 aa8.88□□□□□ -0.99
SMC4-202ENST00000357388 MYO9AB2RTY4 2548 aa8.87□□□□□ -0.99
SMC4-202ENST00000357388 KLKP1Q107X0 134 aa8.86□□□□□ -0.99
SMC4-202ENST00000357388 PCNX3Q9H6A9 2034 aa8.86□□□□□ -0.99
SMC4-202ENST00000357388 LINC00313P59037 77 aa8.86□□□□□ -0.99
SMC4-202ENST00000357388 SPACA4Q8TDM5 124 aa8.86□□□□□ -0.99
SMC4-202ENST00000357388 SSBP3-AS1Q7Z2R9 100 aa8.85□□□□□ -0.99
SMC4-202ENST00000357388 LINC01600Q96MT4 127 aa8.85□□□□□ -0.99
SMC4-202ENST00000357388 COL4A4P53420 1690 aaPredicted RBP8.84□□□□□ -0.99
SMC4-202ENST00000357388 A8MWP4 228 aa8.84□□□□□ -0.99
SMC4-202ENST00000357388 ARHGAP32A7KAX9 2087 aa8.84□□□□□ -0.99
SMC4-202ENST00000357388 H3BNG1 76 aa8.83□□□□□ -1
SMC4-202ENST00000357388 CRIPTQ9P021 101 aa8.83□□□□□ -1
SMC4-202ENST00000357388 A0A1W2PPR1 153 aa8.82□□□□□ -1
SMC4-202ENST00000357388 PLA2G1BP04054 148 aaKnown RBP8.82□□□□□ -1
SMC4-202ENST00000357388 MIR22HGQ0VDD5 57 aa8.81□□□□□ -1
SMC4-202ENST00000357388 JMJD1CQ15652 2540 aa8.8□□□□□ -1
SMC4-202ENST00000357388 GVQW2A0A096LPI5 108 aaPredicted RBP8.8□□□□□ -1
SMC4-202ENST00000357388 IGF2RP11717 2491 aa8.8□□□□□ -1
SMC4-202ENST00000357388 Q6ZRP5 223 aa8.8□□□□□ -1
SMC4-202ENST00000357388 MRPL34Q9BQ48 92 aaKnown RBP8.79□□□□□ -1
SMC4-202ENST00000357388 LINC00336Q6ZUF6 198 aa8.78□□□□□ -1
SMC4-202ENST00000357388 C16orf90A8MZG2 172 aa8.77□□□□□ -1
SMC4-202ENST00000357388 IGLV8-61A0A075B6I0 122 aa8.77□□□□□ -1.01
SMC4-202ENST00000357388 C10orf142B7Z368 130 aa8.77□□□□□ -1.01
SMC4-202ENST00000357388 LITAFQ99732 161 aa8.77□□□□□ -1.01
SMC4-202ENST00000357388 TYMSOSQ8TAI1 123 aa8.77□□□□□ -1.01
SMC4-202ENST00000357388 J3QL48 77 aa8.76□□□□□ -1.01
SMC4-202ENST00000357388 IGLV6-57P01721 117 aa8.75□□□□□ -1.01
SMC4-202ENST00000357388 RTL8CO15255 209 aa8.75□□□□□ -1.01
SMC4-202ENST00000357388 NBDYA0A0U1RRE5 68 aa8.74□□□□□ -1.01
SMC4-202ENST00000357388 WWC2-AS2Q96NR7 200 aa8.74□□□□□ -1.01
SMC4-202ENST00000357388 K7EQZ3 153 aa8.74□□□□□ -1.01
SMC4-202ENST00000357388 EPM2AB3EWF7 344 aa8.73□□□□□ -1.01
SMC4-202ENST00000357388 MUC4Q99102 2169 aa8.73□□□□□ -1.01
SMC4-202ENST00000357388 CEP192Q8TEP8 1941 aa8.73□□□□□ -1.01
SMC4-202ENST00000357388 RPL37AP61513 92 aaKnown RBP8.73□□□□□ -1.01
SMC4-202ENST00000357388 ZFYVE26Q68DK2 2539 aa8.73□□□□□ -1.01
SMC4-202ENST00000357388 PRR15Q8IV56 129 aa8.72□□□□□ -1.01
SMC4-202ENST00000357388 H7BZZ5 65 aa8.72□□□□□ -1.01
SMC4-202ENST00000357388 COL5A1P20908 1838 aaPredicted RBP8.71□□□□□ -1.01
SMC4-202ENST00000357388 WIPF1O43516 503 aa8.71□□□□□ -1.02
SMC4-202ENST00000357388 EXPH5Q8NEV8 1989 aa8.71□□□□□ -1.02
SMC4-202ENST00000357388 ST20-AS1Q8NBB2 130 aa8.7□□□□□ -1.02
SMC4-202ENST00000357388 PIEZO2Q9H5I5 2752 aa8.7□□□□□ -1.02
SMC4-202ENST00000357388 LRRK2Q5S007 2527 aa8.69□□□□□ -1.02
SMC4-202ENST00000357388 SPANXA2-OT1Q8N9U9 137 aa8.69□□□□□ -1.02
SMC4-202ENST00000357388 ABCA12Q86UK0 2595 aa8.69□□□□□ -1.02
SMC4-202ENST00000357388 CDC42SE1Q9NRR8 79 aa8.69□□□□□ -1.02
SMC4-202ENST00000357388 RAI1Q7Z5J4 1906 aaPredicted RBP8.68□□□□□ -1.02
SMC4-202ENST00000357388 MUC22E2RYF6 1773 aaPredicted RBP8.68□□□□□ -1.02
SMC4-202ENST00000357388 KRTAP24-1Q3LI83 254 aa8.67□□□□□ -1.02
SMC4-202ENST00000357388 PHF5AQ7RTV0 110 aaKnown RBP8.67□□□□□ -1.02
SMC4-202ENST00000357388 Q96NJ1 140 aa8.67□□□□□ -1.02
SMC4-202ENST00000357388 LRP4O75096 1905 aa8.66□□□□□ -1.02
SMC4-202ENST00000357388 AGRNO00468 2067 aa8.66□□□□□ -1.02
SMC4-202ENST00000357388 C8orf17Q9NRJ1 99 aa8.66□□□□□ -1.02
SMC4-202ENST00000357388 COX6B2Q6YFQ2 88 aa8.65□□□□□ -1.02
SMC4-202ENST00000357388 KCNQ1DNQ9H478 68 aa8.65□□□□□ -1.02
SMC4-202ENST00000357388 ADAMTS20P59510 1910 aa8.65□□□□□ -1.03
SMC4-202ENST00000357388 PTPRSQ13332 1948 aa8.65□□□□□ -1.03
SMC4-202ENST00000357388 FN1P02751 2386 aaKnown RBP8.63□□□□□ -1.03
SMC4-202ENST00000357388 LINC00528Q8N1L1 170 aa8.63□□□□□ -1.03
SMC4-202ENST00000357388 APLNQ9ULZ1 77 aa8.63□□□□□ -1.03
SMC4-202ENST00000357388 TLN1Q9Y490 2541 aaKnown RBP8.63□□□□□ -1.03
SMC4-202ENST00000357388 LINC00588Q9Y4M8 146 aa8.61□□□□□ -1.03
SMC4-202ENST00000357388 IGLV1-50A0A075B6I6 118 aa8.61□□□□□ -1.03
SMC4-202ENST00000357388 A0A1B0GVX0 72 aa8.6□□□□□ -1.03
SMC4-202ENST00000357388 TLN2Q9Y4G6 2542 aa8.59□□□□□ -1.03
SMC4-202ENST00000357388 KLK9Q2XQG4 91 aa8.59□□□□□ -1.03
SMC4-202ENST00000357388 IGFL1Q6UW32 110 aa8.59□□□□□ -1.03
SMC4-202ENST00000357388 CHTF8P0CG12 524 aa8.58□□□□□ -1.04
SMC4-202ENST00000357388 CPAMD8Q8IZJ3 1885 aa8.58□□□□□ -1.04
SMC4-202ENST00000357388 Q1T7F1 81 aa8.58□□□□□ -1.04
SMC4-202ENST00000357388 Q8NAQ8 132 aa8.58□□□□□ -1.04
SMC4-202ENST00000357388 CHD8Q9HCK8 2581 aa8.58□□□□□ -1.04
SMC4-202ENST00000357388 LUZP6Q538Z0 58 aa8.57□□□□□ -1.04
SMC4-202ENST00000357388 TET2Q6N021 2002 aaPredicted RBP8.57□□□□□ -1.04
SMC4-202ENST00000357388 DNAH10OSP0CZ25 163 aa8.56□□□□□ -1.04
SMC4-202ENST00000357388 USP9XQ93008 2570 aaPredicted RBP8.56□□□□□ -1.04
SMC4-202ENST00000357388 ZNF462Q96JM2 2506 aa8.56□□□□□ -1.04
SMC4-202ENST00000357388 F8P00451 2351 aa8.56□□□□□ -1.04
SMC4-202ENST00000357388 LINC01554Q52M75 96 aa8.53□□□□□ -1.04
SMC4-202ENST00000357388 PLA2G2DQ9UNK4 145 aa8.52□□□□□ -1.04
SMC4-202ENST00000357388 C9orf129Q5T035 196 aaKnown RBP8.52□□□□□ -1.05
SMC4-202ENST00000357388 FAM104AQ969W3 186 aa8.52□□□□□ -1.05
SMC4-202ENST00000357388 DSCR10P59022 87 aa8.5□□□□□ -1.05
SMC4-202ENST00000357388 Q8N377 158 aa8.5□□□□□ -1.05
SMC4-202ENST00000357388 LINC00304Q8N9R0 145 aa8.5□□□□□ -1.05
SMC4-202ENST00000357388 C15orf56Q8N910 161 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms