RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 IBA57-AS1B1ANH7 110 aa5.73□□□□□ -1.49
CDC42SE1-201ENST00000357235 FSHBP01225 129 aa5.73□□□□□ -1.49
CDC42SE1-201ENST00000357235 GIG44P09565 113 aaPredicted RBP5.73□□□□□ -1.49
CDC42SE1-201ENST00000357235 TRBV6-4A0A1B0GX49 114 aa5.72□□□□□ -1.49
CDC42SE1-201ENST00000357235 DNAJC9-AS1A6NH13 148 aa5.72□□□□□ -1.49
CDC42SE1-201ENST00000357235 LINC00959A0A1B0GUT2 108 aa5.72□□□□□ -1.49
CDC42SE1-201ENST00000357235 PLAC8L1A1L4L8 177 aa5.72□□□□□ -1.49
CDC42SE1-201ENST00000357235 GYPEP15421 78 aa5.72□□□□□ -1.49
CDC42SE1-201ENST00000357235 A0A087WZ39 114 aa5.72□□□□□ -1.49
CDC42SE1-201ENST00000357235 TRAV10A0A0B4J240 114 aa5.72□□□□□ -1.49
CDC42SE1-201ENST00000357235 MIFP14174 115 aa5.71□□□□□ -1.5
CDC42SE1-201ENST00000357235 DEFB113Q30KQ7 82 aa5.71□□□□□ -1.5
CDC42SE1-201ENST00000357235 C9orf116Q5BN46 136 aaPredicted RBP5.71□□□□□ -1.5
CDC42SE1-201ENST00000357235 DEFB4AO15263 64 aa5.71□□□□□ -1.5
CDC42SE1-201ENST00000357235 FAM229BQ4G0N7 80 aa5.71□□□□□ -1.5
CDC42SE1-201ENST00000357235 LAMTOR3Q9UHA4 124 aa5.71□□□□□ -1.5
CDC42SE1-201ENST00000357235 PRR15Q8IV56 129 aa5.7□□□□□ -1.5
CDC42SE1-201ENST00000357235 APCP25054 2843 aa5.7□□□□□ -1.5
CDC42SE1-201ENST00000357235 HAMPP81172 84 aa5.7□□□□□ -1.5
CDC42SE1-201ENST00000357235 CD164Q04900 197 aa5.69□□□□□ -1.5
CDC42SE1-201ENST00000357235 Q6ZRU5 148 aa5.69□□□□□ -1.5
CDC42SE1-201ENST00000357235 LINC00269Q8N2A0 174 aa5.69□□□□□ -1.5
CDC42SE1-201ENST00000357235 Q8N3U1 123 aa5.69□□□□□ -1.5
CDC42SE1-201ENST00000357235 TMEM256-PLSCR3K7ERE1 68 aa5.69□□□□□ -1.5
CDC42SE1-201ENST00000357235 ESRGQ1W209 222 aa5.69□□□□□ -1.5
CDC42SE1-201ENST00000357235 ANGP03950 147 aaKnown RBP5.68□□□□□ -1.5
CDC42SE1-201ENST00000357235 LINC01547P58512 204 aaPredicted RBP5.68□□□□□ -1.5
CDC42SE1-201ENST00000357235 C6orf99Q4VX62 202 aa5.68□□□□□ -1.5
CDC42SE1-201ENST00000357235 CYSRT1A8MQ03 144 aa5.67□□□□□ -1.5
CDC42SE1-201ENST00000357235 TM2D3Q9BRN9 247 aa5.67□□□□□ -1.5
CDC42SE1-201ENST00000357235 LINC01006Q8NI28 216 aa5.67□□□□□ -1.5
CDC42SE1-201ENST00000357235 UNC79Q9P2D8 2635 aa5.67□□□□□ -1.5
CDC42SE1-201ENST00000357235 TRBV7-4A0A0J9YYF1 115 aa5.66□□□□□ -1.5
CDC42SE1-201ENST00000357235 Q8N814 137 aa5.66□□□□□ -1.5
CDC42SE1-201ENST00000357235 HTN3P15516 51 aa5.66□□□□□ -1.5
CDC42SE1-201ENST00000357235 CSNK1G2-AS1Q8NCQ2 148 aa5.66□□□□□ -1.5
CDC42SE1-201ENST00000357235 TMEM254Q8TBM7 123 aa5.66□□□□□ -1.5
CDC42SE1-201ENST00000357235 DAD1P61803 113 aa5.66□□□□□ -1.5
CDC42SE1-201ENST00000357235 ITPR2Q14571 2701 aa5.65□□□□□ -1.5
CDC42SE1-201ENST00000357235 IGLV1-51P01701 117 aa5.65□□□□□ -1.51
CDC42SE1-201ENST00000357235 FUSP35637 526 aaKnown RBP eCLIP5.65□□□□□ -1.511e-7■■■□□ 14.6
CDC42SE1-201ENST00000357235 Q8IZM0 81 aa5.65□□□□□ -1.51
CDC42SE1-201ENST00000357235 CHCHD10Q8WYQ3 142 aaPredicted RBP5.65□□□□□ -1.51
CDC42SE1-201ENST00000357235 NREPQ16612 68 aa5.64□□□□□ -1.51
CDC42SE1-201ENST00000357235 C19orf73Q9NVV2 129 aa5.64□□□□□ -1.51
CDC42SE1-201ENST00000357235 CMC4P56277 68 aaPredicted RBP5.64□□□□□ -1.51
CDC42SE1-201ENST00000357235 NANOS2P60321 138 aaKnown RBP5.64□□□□□ -1.51
CDC42SE1-201ENST00000357235 Q6ZVQ6 151 aa5.64□□□□□ -1.51
CDC42SE1-201ENST00000357235 C6orf223Q8N319 242 aa5.64□□□□□ -1.51
CDC42SE1-201ENST00000357235 LINC00167Q96N53 147 aa5.64□□□□□ -1.51
CDC42SE1-201ENST00000357235 CXCL6P80162 114 aa5.63□□□□□ -1.51
CDC42SE1-201ENST00000357235 REG3AQ06141 175 aa5.63□□□□□ -1.51
CDC42SE1-201ENST00000357235 MRPL55Q7Z7F7 128 aaKnown RBP5.63□□□□□ -1.51
CDC42SE1-201ENST00000357235 PRO0255Q9UI72 69 aa5.63□□□□□ -1.51
CDC42SE1-201ENST00000357235 LY6G6DO95868 133 aa5.63□□□□□ -1.51
CDC42SE1-201ENST00000357235 DEFB135Q30KP9 77 aa5.62□□□□□ -1.51
CDC42SE1-201ENST00000357235 UNQ6190/PRO20217Q6UXQ8 127 aa5.62□□□□□ -1.51
CDC42SE1-201ENST00000357235 Q6ZQT0 140 aa5.62□□□□□ -1.51
CDC42SE1-201ENST00000357235 Q8NDZ9 215 aa5.62□□□□□ -1.51
CDC42SE1-201ENST00000357235 PRYO14603 147 aa5.62□□□□□ -1.51
CDC42SE1-201ENST00000357235 ERC2-IT1O76042 136 aa5.61□□□□□ -1.51
CDC42SE1-201ENST00000357235 C10orf25Q5T742 122 aa5.61□□□□□ -1.51
CDC42SE1-201ENST00000357235 XAGE1AQ9HD64 81 aa5.61□□□□□ -1.51
CDC42SE1-201ENST00000357235 CD164L2Q6UWJ8 174 aa5.61□□□□□ -1.51
CDC42SE1-201ENST00000357235 A0A1B0GUV1 79 aa5.61□□□□□ -1.51
CDC42SE1-201ENST00000357235 M0R2N4 97 aa5.61□□□□□ -1.51
CDC42SE1-201ENST00000357235 BPY2O14599 106 aa5.61□□□□□ -1.51
CDC42SE1-201ENST00000357235 Q6ZQY7 126 aa5.61□□□□□ -1.51
CDC42SE1-201ENST00000357235 MAST4O15021 2626 aa5.61□□□□□ -1.51
CDC42SE1-201ENST00000357235 SPAG11BQ08648 103 aa5.6□□□□□ -1.51
CDC42SE1-201ENST00000357235 Q6ZTC4 211 aa5.6□□□□□ -1.51
CDC42SE1-201ENST00000357235 SCXQ7RTU7 201 aa5.6□□□□□ -1.51
CDC42SE1-201ENST00000357235 KRTAP1-3Q8IUG1 177 aa5.6□□□□□ -1.51
CDC42SE1-201ENST00000357235 VWFP04275 2813 aa5.6□□□□□ -1.51
CDC42SE1-201ENST00000357235 KIAA0087Q14695 138 aa5.6□□□□□ -1.51
CDC42SE1-201ENST00000357235 LOC110117498A0A087WWA1 95 aa5.59□□□□□ -1.51
CDC42SE1-201ENST00000357235 LRCOL1A6NCL2 159 aa5.59□□□□□ -1.51
CDC42SE1-201ENST00000357235 ZNF561-AS1K7EIQ3 104 aa5.59□□□□□ -1.51
CDC42SE1-201ENST00000357235 SPATA3Q8NHX4 192 aa5.59□□□□□ -1.51
CDC42SE1-201ENST00000357235 KLK12Q9UKR0 248 aa5.59□□□□□ -1.51
CDC42SE1-201ENST00000357235 LINC00575Q6W349 94 aa5.58□□□□□ -1.52
CDC42SE1-201ENST00000357235 PSPHP1O15172 72 aa5.58□□□□□ -1.52
CDC42SE1-201ENST00000357235 Q1T7F1 81 aa5.58□□□□□ -1.52
CDC42SE1-201ENST00000357235 X6R8D5 127 aa5.58□□□□□ -1.52
CDC42SE1-201ENST00000357235 COX17Q14061 63 aa5.58□□□□□ -1.52
CDC42SE1-201ENST00000357235 PDE6GP18545 87 aa5.57□□□□□ -1.52
CDC42SE1-201ENST00000357235 Q6ZRP5 223 aa5.57□□□□□ -1.52
CDC42SE1-201ENST00000357235 hDV103S1A0JD37 113 aa5.56□□□□□ -1.52
CDC42SE1-201ENST00000357235 SMR3AQ99954 134 aa5.56□□□□□ -1.52
CDC42SE1-201ENST00000357235 HIGD2BQ4VC39 106 aa5.56□□□□□ -1.52
CDC42SE1-201ENST00000357235 HIGD2AQ9BW72 106 aa5.55□□□□□ -1.52
CDC42SE1-201ENST00000357235 CELA1Q9UNI1 258 aa5.55□□□□□ -1.52
CDC42SE1-201ENST00000357235 IGHV4-28A0A0C4DH34 117 aa5.55□□□□□ -1.52
CDC42SE1-201ENST00000357235 RBM12B-AS1Q9P1G2 102 aa5.54□□□□□ -1.52
CDC42SE1-201ENST00000357235 ATRQ13535 2644 aa5.54□□□□□ -1.52
CDC42SE1-201ENST00000357235 F8P00451 2351 aa5.53□□□□□ -1.52
CDC42SE1-201ENST00000357235 TRAV22A0A0B4J277 110 aa5.53□□□□□ -1.52
CDC42SE1-201ENST00000357235 DIRC1Q969H9 104 aa5.53□□□□□ -1.52
CDC42SE1-201ENST00000357235 OCR1Q9BZK8 76 aa5.53□□□□□ -1.52
CDC42SE1-201ENST00000357235 PDZD2O15018 2839 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms