RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 J3QLI3 93 aa12.92□□□□□ -0.34
PRPF39-201ENST00000355765 C6orf223Q8N319 242 aa12.92□□□□□ -0.34
PRPF39-201ENST00000355765 SMIM26A0A096LP01 95 aa12.91□□□□□ -0.34
PRPF39-201ENST00000355765 HELZ2Q9BYK8 2649 aaKnown RBP12.91□□□□□ -0.34
PRPF39-201ENST00000355765 TRBV7-6A0A0J9YX20 115 aa12.9□□□□□ -0.34
PRPF39-201ENST00000355765 BCE1O60756 84 aa12.9□□□□□ -0.34
PRPF39-201ENST00000355765 CCL24O00175 119 aa12.88□□□□□ -0.35
PRPF39-201ENST00000355765 FSHBP01225 129 aa12.88□□□□□ -0.35
PRPF39-201ENST00000355765 GCN1Q92616 2671 aaKnown RBP12.87□□□□□ -0.35
PRPF39-201ENST00000355765 DSCR9P59020 149 aa12.87□□□□□ -0.35
PRPF39-201ENST00000355765 C10orf25Q5T742 122 aa12.86□□□□□ -0.35
PRPF39-201ENST00000355765 CHCHD10Q8WYQ3 142 aaPredicted RBP12.86□□□□□ -0.35
PRPF39-201ENST00000355765 COX17Q14061 63 aa12.86□□□□□ -0.35
PRPF39-201ENST00000355765 CSNK1G2-AS1Q8NCQ2 148 aa12.86□□□□□ -0.35
PRPF39-201ENST00000355765 MUC7Q8TAX7 377 aa12.86□□□□□ -0.35
PRPF39-201ENST00000355765 ZNF469Q96JG9 3925 aaPredicted RBP12.85□□□□□ -0.35
PRPF39-201ENST00000355765 KMT2BQ9UMN6 2715 aaPredicted RBP12.85□□□□□ -0.35
PRPF39-201ENST00000355765 CXCL6P80162 114 aa12.85□□□□□ -0.35
PRPF39-201ENST00000355765 MIFP14174 115 aa12.84□□□□□ -0.35
PRPF39-201ENST00000355765 LINC01006Q8NI28 216 aa12.84□□□□□ -0.35
PRPF39-201ENST00000355765 TRBV7-4A0A0J9YYF1 115 aa12.84□□□□□ -0.35
PRPF39-201ENST00000355765 A0A1B0GUV1 79 aa12.84□□□□□ -0.35
PRPF39-201ENST00000355765 IGHV4-31P0DP07 118 aa12.84□□□□□ -0.35
PRPF39-201ENST00000355765 UNQ6190/PRO20217Q6UXQ8 127 aa12.84□□□□□ -0.35
PRPF39-201ENST00000355765 Q8N9L7 120 aa12.83□□□□□ -0.35
PRPF39-201ENST00000355765 BRK1Q8WUW1 75 aa12.83□□□□□ -0.35
PRPF39-201ENST00000355765 CD164L2Q6UWJ8 174 aa12.83□□□□□ -0.36
PRPF39-201ENST00000355765 A0A0U1RQV1 116 aa12.82□□□□□ -0.36
PRPF39-201ENST00000355765 ANGP03950 147 aaKnown RBP12.82□□□□□ -0.36
PRPF39-201ENST00000355765 NREPQ16612 68 aa12.82□□□□□ -0.36
PRPF39-201ENST00000355765 FAM229BQ4G0N7 80 aa12.81□□□□□ -0.36
PRPF39-201ENST00000355765 MPLKIPQ8TAP9 179 aa12.81□□□□□ -0.36
PRPF39-201ENST00000355765 ITPR3Q14573 2671 aa12.8□□□□□ -0.36
PRPF39-201ENST00000355765 ITPR2Q14571 2701 aa12.8□□□□□ -0.36
PRPF39-201ENST00000355765 C9orf66Q5T8R8 295 aa12.79□□□□□ -0.36
PRPF39-201ENST00000355765 ESM1Q9NQ30 184 aa12.79□□□□□ -0.36
PRPF39-201ENST00000355765 IGHV4-28A0A0C4DH34 117 aa12.79□□□□□ -0.36
PRPF39-201ENST00000355765 TMEM254Q8TBM7 123 aa12.79□□□□□ -0.36
PRPF39-201ENST00000355765 DEFB113Q30KQ7 82 aa12.79□□□□□ -0.36
PRPF39-201ENST00000355765 C19orf73Q9NVV2 129 aa12.79□□□□□ -0.36
PRPF39-201ENST00000355765 BPY2O14599 106 aa12.78□□□□□ -0.36
PRPF39-201ENST00000355765 REG3AQ06141 175 aa12.78□□□□□ -0.36
PRPF39-201ENST00000355765 IGLV6-57P01721 117 aa12.77□□□□□ -0.36
PRPF39-201ENST00000355765 NDUFC1O43677 76 aa12.77□□□□□ -0.37
PRPF39-201ENST00000355765 PDE6GP18545 87 aa12.76□□□□□ -0.37
PRPF39-201ENST00000355765 XAGE1AQ9HD64 81 aa12.76□□□□□ -0.37
PRPF39-201ENST00000355765 FLNAP21333 2647 aaKnown RBP12.76□□□□□ -0.37
PRPF39-201ENST00000355765 SPAG11BQ08648 103 aa12.76□□□□□ -0.37
PRPF39-201ENST00000355765 ACANP16112 2415 aa12.75□□□□□ -0.37
PRPF39-201ENST00000355765 CYSRT1A8MQ03 144 aa12.73□□□□□ -0.37
PRPF39-201ENST00000355765 DIRC1Q969H9 104 aa12.73□□□□□ -0.37
PRPF39-201ENST00000355765 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.73□□□□□ -0.37
PRPF39-201ENST00000355765 PRO0255Q9UI72 69 aa12.72□□□□□ -0.37
PRPF39-201ENST00000355765 HECTD1Q9ULT8 2610 aa12.72□□□□□ -0.37
PRPF39-201ENST00000355765 DAD1P61803 113 aa12.71□□□□□ -0.37
PRPF39-201ENST00000355765 J3QKU1 62 aa12.71□□□□□ -0.37
PRPF39-201ENST00000355765 ATP5EP56381 51 aaPredicted RBP12.71□□□□□ -0.38
PRPF39-201ENST00000355765 DEFB4AO15263 64 aa12.7□□□□□ -0.38
PRPF39-201ENST00000355765 FASNP49327 2511 aaKnown RBP12.69□□□□□ -0.38
PRPF39-201ENST00000355765 UNC79Q9P2D8 2635 aa12.69□□□□□ -0.38
PRPF39-201ENST00000355765 NOTCH2Q04721 2471 aa12.69□□□□□ -0.38
PRPF39-201ENST00000355765 COX7BP24311 80 aa12.69□□□□□ -0.38
PRPF39-201ENST00000355765 CMC4P56277 68 aaPredicted RBP12.69□□□□□ -0.38
PRPF39-201ENST00000355765 KRTAP1-3Q8IUG1 177 aa12.69□□□□□ -0.38
PRPF39-201ENST00000355765 ZNF73O43830 326 aaPredicted RBP12.68□□□□□ -0.38
PRPF39-201ENST00000355765 IGLV1-51P01701 117 aa12.68□□□□□ -0.38
PRPF39-201ENST00000355765 DNAJC9-AS1A6NH13 148 aa12.67□□□□□ -0.38
PRPF39-201ENST00000355765 PRYO14603 147 aa12.67□□□□□ -0.38
PRPF39-201ENST00000355765 PDZD2O15018 2839 aa12.67□□□□□ -0.38
PRPF39-201ENST00000355765 IGKV4-1P06312 121 aa12.66□□□□□ -0.38
PRPF39-201ENST00000355765 HIGD2AQ9BW72 106 aa12.66□□□□□ -0.38
PRPF39-201ENST00000355765 MTORP42345 2549 aa12.65□□□□□ -0.38
PRPF39-201ENST00000355765 FUSP35637 526 aaKnown RBP eCLIP12.65□□□□□ -0.38
PRPF39-201ENST00000355765 LINC00612Q8N6U2 182 aa12.64□□□□□ -0.39
PRPF39-201ENST00000355765 C3orf84H3BNL1 204 aa12.64□□□□□ -0.39
PRPF39-201ENST00000355765 C1orf195Q5TG92 126 aa12.64□□□□□ -0.39
PRPF39-201ENST00000355765 A0A0J9YWU9 116 aa12.63□□□□□ -0.39
PRPF39-201ENST00000355765 IGHV4-30-4P0DP06 118 aa12.63□□□□□ -0.39
PRPF39-201ENST00000355765 OCR1Q9BZK8 76 aa12.63□□□□□ -0.39
PRPF39-201ENST00000355765 H3BQ85 93 aa12.63□□□□□ -0.39
PRPF39-201ENST00000355765 C6orf48Q9UBA6 75 aa12.63□□□□□ -0.39
PRPF39-201ENST00000355765 ELOF1P60002 83 aaKnown RBP12.62□□□□□ -0.39
PRPF39-201ENST00000355765 ESRGQ1W209 222 aa12.61□□□□□ -0.39
PRPF39-201ENST00000355765 KLK12Q9UKR0 248 aa12.61□□□□□ -0.39
PRPF39-201ENST00000355765 X6R8D5 127 aa12.61□□□□□ -0.39
PRPF39-201ENST00000355765 LRCOL1A6NCL2 159 aa12.6□□□□□ -0.39
PRPF39-201ENST00000355765 ERC2-IT1O76042 136 aa12.6□□□□□ -0.39
PRPF39-201ENST00000355765 CELA1Q9UNI1 258 aa12.6□□□□□ -0.39
PRPF39-201ENST00000355765 Q6ZTC4 211 aa12.59□□□□□ -0.39
PRPF39-201ENST00000355765 FAM30AQ9NZY2 134 aa12.57□□□□□ -0.4
PRPF39-201ENST00000355765 HTN3P15516 51 aa12.56□□□□□ -0.4
PRPF39-201ENST00000355765 HIGD2BQ4VC39 106 aa12.56□□□□□ -0.4
PRPF39-201ENST00000355765 F8WDY8 70 aa12.55□□□□□ -0.4
PRPF39-201ENST00000355765 DEFB105AQ8NG35 78 aa12.55□□□□□ -0.4
PRPF39-201ENST00000355765 V9GYY9 64 aa12.54□□□□□ -0.4
PRPF39-201ENST00000355765 VPREB1P12018 145 aa12.53□□□□□ -0.4
PRPF39-201ENST00000355765 SMIM29Q86T20 159 aa12.53□□□□□ -0.4
PRPF39-201ENST00000355765 LINC00528Q8N1L1 170 aa12.52□□□□□ -0.41
PRPF39-201ENST00000355765 DEFB135Q30KP9 77 aa12.51□□□□□ -0.41
PRPF39-201ENST00000355765 GVQW2A0A096LPI5 108 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms