RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 IGLV5-45A0A087WSX0 123 aa6.54□□□□□ -1.36
SMG6-202ENST00000354901 A0A096LPF7 62 aa6.54□□□□□ -1.36
SMG6-202ENST00000354901 IGLV5-39A0A0G2JS06 123 aa6.54□□□□□ -1.36
SMG6-202ENST00000354901 M0R2N4 97 aa6.54□□□□□ -1.36
SMG6-202ENST00000354901 TRBV10-1A0A0K0K1A3 114 aa6.53□□□□□ -1.36
SMG6-202ENST00000354901 IGLV4-60A0A075B6I1 120 aa6.53□□□□□ -1.36
SMG6-202ENST00000354901 CLPSL2Q6UWE3 100 aa6.53□□□□□ -1.36
SMG6-202ENST00000354901 VWFP04275 2813 aa6.52□□□□□ -1.37
SMG6-202ENST00000354901 PSPHP1O15172 72 aa6.52□□□□□ -1.37
SMG6-202ENST00000354901 Q8N3U1 123 aa6.52□□□□□ -1.37
SMG6-202ENST00000354901 UNC79Q9P2D8 2635 aa6.52□□□□□ -1.37
SMG6-202ENST00000354901 PLAC8L1A1L4L8 177 aa6.52□□□□□ -1.37
SMG6-202ENST00000354901 Q8N9L7 120 aa6.52□□□□□ -1.37
SMG6-202ENST00000354901 SMR3AQ99954 134 aa6.52□□□□□ -1.37
SMG6-202ENST00000354901 MIFP14174 115 aa6.51□□□□□ -1.37
SMG6-202ENST00000354901 SPTSSBQ8NFR3 76 aa6.51□□□□□ -1.37
SMG6-202ENST00000354901 C16orf74Q96GX8 76 aa6.51□□□□□ -1.37
SMG6-202ENST00000354901 PRR4Q16378 134 aa6.5□□□□□ -1.37
SMG6-202ENST00000354901 ATP5EP2Q5VTU8 51 aa6.5□□□□□ -1.37
SMG6-202ENST00000354901 LINC01547P58512 204 aaPredicted RBP6.5□□□□□ -1.37
SMG6-202ENST00000354901 C4orf48Q5BLP8 95 aa6.5□□□□□ -1.37
SMG6-202ENST00000354901 JMJD7-PLA2G4BH0Y9G9 81 aa6.49□□□□□ -1.37
SMG6-202ENST00000354901 DEFB4AO15263 64 aa6.49□□□□□ -1.37
SMG6-202ENST00000354901 ATRQ13535 2644 aa6.49□□□□□ -1.37
SMG6-202ENST00000354901 IGLV1-51P01701 117 aa6.49□□□□□ -1.37
SMG6-202ENST00000354901 PDZD2O15018 2839 aa6.49□□□□□ -1.37
SMG6-202ENST00000354901 CD164Q04900 197 aa6.49□□□□□ -1.37
SMG6-202ENST00000354901 C19orf73Q9NVV2 129 aa6.49□□□□□ -1.37
SMG6-202ENST00000354901 TRBV6-8A0A0A6YYG3 113 aa6.48□□□□□ -1.37
SMG6-202ENST00000354901 NANOS2P60321 138 aaKnown RBP6.48□□□□□ -1.37
SMG6-202ENST00000354901 Q6ZVQ6 151 aa6.48□□□□□ -1.37
SMG6-202ENST00000354901 TRBV6-4A0A1B0GX49 114 aa6.47□□□□□ -1.37
SMG6-202ENST00000354901 GYPEP15421 78 aa6.47□□□□□ -1.37
SMG6-202ENST00000354901 KLKP1Q107X0 134 aa6.47□□□□□ -1.37
SMG6-202ENST00000354901 NREPQ16612 68 aa6.47□□□□□ -1.37
SMG6-202ENST00000354901 CSNK1G2-AS1Q8NCQ2 148 aa6.47□□□□□ -1.37
SMG6-202ENST00000354901 OBSCN-AS1Q96MR7 158 aa6.47□□□□□ -1.37
SMG6-202ENST00000354901 TMEM256-PLSCR3K7ERE1 68 aa6.47□□□□□ -1.37
SMG6-202ENST00000354901 FUSP35637 526 aaKnown RBP eCLIP6.47□□□□□ -1.37
SMG6-202ENST00000354901 CMC4P56277 68 aaPredicted RBP6.47□□□□□ -1.37
SMG6-202ENST00000354901 C6orf99Q4VX62 202 aa6.47□□□□□ -1.37
SMG6-202ENST00000354901 TMEM254Q8TBM7 123 aa6.46□□□□□ -1.37
SMG6-202ENST00000354901 ZNF561-AS1K7EIQ3 104 aa6.46□□□□□ -1.38
SMG6-202ENST00000354901 Q8N814 137 aa6.46□□□□□ -1.38
SMG6-202ENST00000354901 IGLV10-54A0A075B6I4 117 aa6.45□□□□□ -1.38
SMG6-202ENST00000354901 IGHV3OR16-9A0A0B4J2B5 98 aa6.45□□□□□ -1.38
SMG6-202ENST00000354901 ESRGQ1W209 222 aa6.45□□□□□ -1.38
SMG6-202ENST00000354901 SPATA3Q8NHX4 192 aa6.45□□□□□ -1.38
SMG6-202ENST00000354901 CELA1Q9UNI1 258 aa6.45□□□□□ -1.38
SMG6-202ENST00000354901 EPM2AB3EWF7 344 aa6.44□□□□□ -1.38
SMG6-202ENST00000354901 FAM19A3Q7Z5A8 133 aa6.44□□□□□ -1.38
SMG6-202ENST00000354901 TENM1Q9UKZ4 2725 aa6.44□□□□□ -1.38
SMG6-202ENST00000354901 LY6G6DO95868 133 aa6.44□□□□□ -1.38
SMG6-202ENST00000354901 HIGD2AQ9BW72 106 aa6.44□□□□□ -1.38
SMG6-202ENST00000354901 LINC00959A0A1B0GUT2 108 aa6.43□□□□□ -1.38
SMG6-202ENST00000354901 NDUFC1O43677 76 aa6.43□□□□□ -1.38
SMG6-202ENST00000354901 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.43□□□□□ -1.38
SMG6-202ENST00000354901 BPY2O14599 106 aa6.43□□□□□ -1.38
SMG6-202ENST00000354901 KRTAP10-3P60369 221 aa6.43□□□□□ -1.38
SMG6-202ENST00000354901 HTN3P15516 51 aa6.42□□□□□ -1.38
SMG6-202ENST00000354901 DEFB135Q30KP9 77 aa6.42□□□□□ -1.38
SMG6-202ENST00000354901 C9orf116Q5BN46 136 aaPredicted RBP6.42□□□□□ -1.38
SMG6-202ENST00000354901 OTOGQ6ZRI0 2925 aa6.42□□□□□ -1.38
SMG6-202ENST00000354901 PRYO14603 147 aa6.41□□□□□ -1.38
SMG6-202ENST00000354901 Q6ZQY7 126 aa6.41□□□□□ -1.38
SMG6-202ENST00000354901 Q6ZQT0 140 aa6.41□□□□□ -1.38
SMG6-202ENST00000354901 ATP5EP56381 51 aaPredicted RBP6.4□□□□□ -1.38
SMG6-202ENST00000354901 LINC00269Q8N2A0 174 aa6.4□□□□□ -1.38
SMG6-202ENST00000354901 IGHV4-28A0A0C4DH34 117 aa6.4□□□□□ -1.39
SMG6-202ENST00000354901 TRBV10-3A0A0K0K1G6 114 aa6.4□□□□□ -1.39
SMG6-202ENST00000354901 TEP1Q99973 2627 aaKnown RBP6.4□□□□□ -1.39
SMG6-202ENST00000354901 IBA57-AS1B1ANH7 110 aa6.4□□□□□ -1.39
SMG6-202ENST00000354901 FAM30AQ9NZY2 134 aa6.4□□□□□ -1.39
SMG6-202ENST00000354901 A8MU10 97 aa6.39□□□□□ -1.39
SMG6-202ENST00000354901 ANGP03950 147 aaKnown RBP6.39□□□□□ -1.39
SMG6-202ENST00000354901 X6R8D5 127 aa6.39□□□□□ -1.39
SMG6-202ENST00000354901 TRBV7-4A0A0J9YYF1 115 aa6.39□□□□□ -1.39
SMG6-202ENST00000354901 C11orf45Q8TAV5 145 aa6.39□□□□□ -1.39
SMG6-202ENST00000354901 PRO0255Q9UI72 69 aa6.38□□□□□ -1.39
SMG6-202ENST00000354901 ANK3Q12955 4377 aaKnown RBP6.38□□□□□ -1.39
SMG6-202ENST00000354901 C6orf223Q8N319 242 aa6.38□□□□□ -1.39
SMG6-202ENST00000354901 RBM12B-AS1Q9P1G2 102 aa6.38□□□□□ -1.39
SMG6-202ENST00000354901 C3orf84H3BNL1 204 aa6.37□□□□□ -1.39
SMG6-202ENST00000354901 PRR15Q8IV56 129 aa6.37□□□□□ -1.39
SMG6-202ENST00000354901 NSD1Q96L73 2696 aaPredicted RBP6.37□□□□□ -1.39
SMG6-202ENST00000354901 CHCHD10Q8WYQ3 142 aaPredicted RBP6.35□□□□□ -1.39
SMG6-202ENST00000354901 INAFM1C9JVW0 142 aa6.35□□□□□ -1.39
SMG6-202ENST00000354901 APOC4P55056 127 aa6.35□□□□□ -1.39
SMG6-202ENST00000354901 TRRAPQ9Y4A5 3859 aa6.35□□□□□ -1.39
SMG6-202ENST00000354901 CHKB-CPT1BH3BT56 60 aa6.35□□□□□ -1.39
SMG6-202ENST00000354901 REG3AQ06141 175 aa6.35□□□□□ -1.39
SMG6-202ENST00000354901 H3BS24 57 aa6.34□□□□□ -1.39
SMG6-202ENST00000354901 MUC7Q8TAX7 377 aa6.34□□□□□ -1.39
SMG6-202ENST00000354901 F8P00451 2351 aa6.34□□□□□ -1.39
SMG6-202ENST00000354901 A8MUN3 132 aa6.34□□□□□ -1.4
SMG6-202ENST00000354901 HIVEP1P15822 2718 aa6.34□□□□□ -1.4
SMG6-202ENST00000354901 CD164L2Q6UWJ8 174 aa6.33□□□□□ -1.4
SMG6-202ENST00000354901 Q8IZM0 81 aa6.33□□□□□ -1.4
SMG6-202ENST00000354901 A0A1B0GUV1 79 aa6.33□□□□□ -1.4
SMG6-202ENST00000354901 LINC00575Q6W349 94 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms