RNA–Protein interactions for RNA: ENST00000354452.7

TCF4-201, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 3,482 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-201ENST00000354452 PRO0628Q9UI54 55 aa12.19□□□□□ -0.46
TCF4-201ENST00000354452 SETXQ7Z333 2677 aaKnown RBP12.18□□□□□ -0.46
TCF4-201ENST00000354452 PRB2P02812 416 aaPredicted RBP12.18□□□□□ -0.46
TCF4-201ENST00000354452 REG3AQ06141 175 aa12.18□□□□□ -0.46
TCF4-201ENST00000354452 TRBV7-6A0A0J9YX20 115 aa12.17□□□□□ -0.46
TCF4-201ENST00000354452 TRBV10-3A0A0K0K1G6 114 aa12.17□□□□□ -0.46
TCF4-201ENST00000354452 MIFP14174 115 aa12.17□□□□□ -0.46
TCF4-201ENST00000354452 IGHV4-28A0A0C4DH34 117 aa12.16□□□□□ -0.46
TCF4-201ENST00000354452 IGSF10Q6WRI0 2623 aa12.16□□□□□ -0.46
TCF4-201ENST00000354452 DEFB105AQ8NG35 78 aa12.16□□□□□ -0.46
TCF4-201ENST00000354452 LRCOL1A6NCL2 159 aa12.15□□□□□ -0.46
TCF4-201ENST00000354452 CR1P17927 2039 aa12.15□□□□□ -0.46
TCF4-201ENST00000354452 C10orf25Q5T742 122 aa12.14□□□□□ -0.47
TCF4-201ENST00000354452 IL17DQ8TAD2 202 aa12.14□□□□□ -0.47
TCF4-201ENST00000354452 CD164L2Q6UWJ8 174 aa12.14□□□□□ -0.47
TCF4-201ENST00000354452 NREPQ16612 68 aa12.14□□□□□ -0.47
TCF4-201ENST00000354452 SPATA3Q8NHX4 192 aa12.14□□□□□ -0.47
TCF4-201ENST00000354452 DIRC1Q969H9 104 aa12.14□□□□□ -0.47
TCF4-201ENST00000354452 IGHV4-31P0DP07 118 aa12.13□□□□□ -0.47
TCF4-201ENST00000354452 MUC7Q8TAX7 377 aa12.13□□□□□ -0.47
TCF4-201ENST00000354452 KLK12Q9UKR0 248 aa12.13□□□□□ -0.47
TCF4-201ENST00000354452 C3orf84H3BNL1 204 aa12.12□□□□□ -0.47
TCF4-201ENST00000354452 BPY2O14599 106 aa12.12□□□□□ -0.47
TCF4-201ENST00000354452 PRO0255Q9UI72 69 aa12.12□□□□□ -0.47
TCF4-201ENST00000354452 PLAC8L1A1L4L8 177 aa12.12□□□□□ -0.47
TCF4-201ENST00000354452 GIG44P09565 113 aaPredicted RBP12.12□□□□□ -0.47
TCF4-201ENST00000354452 LYPD5Q6UWN5 251 aa12.12□□□□□ -0.47
TCF4-201ENST00000354452 CYSRT1A8MQ03 144 aa12.11□□□□□ -0.47
TCF4-201ENST00000354452 Q8NDZ9 215 aa12.1□□□□□ -0.47
TCF4-201ENST00000354452 LINC00482Q8N8I6 264 aa12.1□□□□□ -0.47
TCF4-201ENST00000354452 TMEM254Q8TBM7 123 aa12.1□□□□□ -0.47
TCF4-201ENST00000354452 CMC4P56277 68 aaPredicted RBP12.09□□□□□ -0.47
TCF4-201ENST00000354452 FLNAP21333 2647 aaKnown RBP12.09□□□□□ -0.47
TCF4-201ENST00000354452 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.09□□□□□ -0.47
TCF4-201ENST00000354452 PDE6GP18545 87 aa12.09□□□□□ -0.47
TCF4-201ENST00000354452 COX17Q14061 63 aa12.09□□□□□ -0.47
TCF4-201ENST00000354452 COX7BP24311 80 aa12.08□□□□□ -0.48
TCF4-201ENST00000354452 KLKP1Q107X0 134 aa12.08□□□□□ -0.48
TCF4-201ENST00000354452 LINC00167Q96N53 147 aa12.07□□□□□ -0.48
TCF4-201ENST00000354452 CELA1Q9UNI1 258 aa12.07□□□□□ -0.48
TCF4-201ENST00000354452 HIGD2BQ4VC39 106 aa12.07□□□□□ -0.48
TCF4-201ENST00000354452 FP248Q71RG6 208 aaPredicted RBP12.06□□□□□ -0.48
TCF4-201ENST00000354452 FUSP35637 526 aaKnown RBP eCLIP12.06□□□□□ -0.48
TCF4-201ENST00000354452 KIAA0087Q14695 138 aa12.05□□□□□ -0.48
TCF4-201ENST00000354452 DNAJC9-AS1A6NH13 148 aa12.05□□□□□ -0.48
TCF4-201ENST00000354452 A0A1B0GUV1 79 aa12.05□□□□□ -0.48
TCF4-201ENST00000354452 NDUFC1O43677 76 aa12.04□□□□□ -0.48
TCF4-201ENST00000354452 ZNF73O43830 326 aaPredicted RBP12.04□□□□□ -0.48
TCF4-201ENST00000354452 DEFB135Q30KP9 77 aa12.04□□□□□ -0.48
TCF4-201ENST00000354452 KRTAP10-9P60411 292 aa12.03□□□□□ -0.48
TCF4-201ENST00000354452 LOC110117498A0A087WWA1 95 aa12.03□□□□□ -0.48
TCF4-201ENST00000354452 CXCL6P80162 114 aa12.03□□□□□ -0.48
TCF4-201ENST00000354452 PRR4Q16378 134 aa12.03□□□□□ -0.48
TCF4-201ENST00000354452 C1orf195Q5TG92 126 aa12.02□□□□□ -0.49
TCF4-201ENST00000354452 CAMK2N2Q96S95 79 aa12.01□□□□□ -0.49
TCF4-201ENST00000354452 HIGD2AQ9BW72 106 aa12.01□□□□□ -0.49
TCF4-201ENST00000354452 FAM30AQ9NZY2 134 aa12.01□□□□□ -0.49
TCF4-201ENST00000354452 UNC79Q9P2D8 2635 aa12□□□□□ -0.49
TCF4-201ENST00000354452 USP24Q9UPU5 2620 aa11.98□□□□□ -0.49
TCF4-201ENST00000354452 PRYO14603 147 aa11.98□□□□□ -0.49
TCF4-201ENST00000354452 CSNK1G2-AS1Q8NCQ2 148 aa11.97□□□□□ -0.49
TCF4-201ENST00000354452 ITPR3Q14573 2671 aa11.97□□□□□ -0.49
TCF4-201ENST00000354452 V9GYY9 64 aa11.96□□□□□ -0.49
TCF4-201ENST00000354452 BCE1O60756 84 aa11.96□□□□□ -0.49
TCF4-201ENST00000354452 IGLV1-51P01701 117 aa11.95□□□□□ -0.5
TCF4-201ENST00000354452 FAM229BQ4G0N7 80 aa11.95□□□□□ -0.5
TCF4-201ENST00000354452 ATP5EP56381 51 aaPredicted RBP11.93□□□□□ -0.5
TCF4-201ENST00000354452 DEFB113Q30KQ7 82 aa11.92□□□□□ -0.5
TCF4-201ENST00000354452 TRBV7-4A0A0J9YYF1 115 aa11.92□□□□□ -0.5
TCF4-201ENST00000354452 IGLV6-57P01721 117 aa11.92□□□□□ -0.5
TCF4-201ENST00000354452 ESRGQ1W209 222 aa11.92□□□□□ -0.5
TCF4-201ENST00000354452 FSHBP01225 129 aa11.91□□□□□ -0.5
TCF4-201ENST00000354452 H3BQ85 93 aa11.9□□□□□ -0.5
TCF4-201ENST00000354452 C6orf48Q9UBA6 75 aa11.9□□□□□ -0.5
TCF4-201ENST00000354452 PSPHP1O15172 72 aa11.9□□□□□ -0.51
TCF4-201ENST00000354452 C19orf73Q9NVV2 129 aa11.9□□□□□ -0.51
TCF4-201ENST00000354452 NKAPP1Q8N9T2 125 aa11.88□□□□□ -0.51
TCF4-201ENST00000354452 C16orf95Q9H693 158 aa11.88□□□□□ -0.51
TCF4-201ENST00000354452 C9orf66Q5T8R8 295 aa11.87□□□□□ -0.51
TCF4-201ENST00000354452 SMIM29Q86T20 159 aa11.87□□□□□ -0.51
TCF4-201ENST00000354452 X6R8D5 127 aa11.84□□□□□ -0.51
TCF4-201ENST00000354452 ELOF1P60002 83 aaKnown RBP11.83□□□□□ -0.52
TCF4-201ENST00000354452 IGKV4-1P06312 121 aa11.83□□□□□ -0.52
TCF4-201ENST00000354452 A0A0J9YWU9 116 aa11.82□□□□□ -0.52
TCF4-201ENST00000354452 M0R378 163 aa11.82□□□□□ -0.52
TCF4-201ENST00000354452 IGHV4-30-4P0DP06 118 aa11.82□□□□□ -0.52
TCF4-201ENST00000354452 IGKV2D-24A0A075B6R9 120 aa11.82□□□□□ -0.52
TCF4-201ENST00000354452 SEC61GP60059 68 aa11.81□□□□□ -0.52
TCF4-201ENST00000354452 RPL37AP8A6NKH3 93 aa11.81□□□□□ -0.52
TCF4-201ENST00000354452 LYRM9A8MSI8 78 aa11.81□□□□□ -0.52
TCF4-201ENST00000354452 EPM2AB3EWF7 344 aa11.8□□□□□ -0.52
TCF4-201ENST00000354452 Q6ZRU5 148 aa11.8□□□□□ -0.52
TCF4-201ENST00000354452 LELP1Q5T871 98 aa11.79□□□□□ -0.52
TCF4-201ENST00000354452 SPART-AS1P0CW21 52 aa11.79□□□□□ -0.52
TCF4-201ENST00000354452 ATRQ13535 2644 aa11.78□□□□□ -0.52
TCF4-201ENST00000354452 DEFB116Q30KQ4 102 aa11.78□□□□□ -0.52
TCF4-201ENST00000354452 OCR1Q9BZK8 76 aa11.76□□□□□ -0.53
TCF4-201ENST00000354452 KPRPQ5T749 579 aaPredicted RBP11.75□□□□□ -0.53
TCF4-201ENST00000354452 VPREB1P12018 145 aa11.75□□□□□ -0.53
TCF4-201ENST00000354452 ETDCA0A1B0GVM5 59 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms