RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 PLEKHB2Q96CS7 222 aa8.35□□□□□ -1.07
PRPF40A-201ENST00000354363 RPS10P5Q9NQ39 176 aa8.35□□□□□ -1.07
PRPF40A-201ENST00000354363 C10orf91Q5T1B1 145 aa8.34□□□□□ -1.07
PRPF40A-201ENST00000354363 CTAG1AP78358 180 aa8.33□□□□□ -1.08
PRPF40A-201ENST00000354363 RHEBQ15382 184 aa8.33□□□□□ -1.08
PRPF40A-201ENST00000354363 TPRXLQ17RH7 258 aa8.33□□□□□ -1.08
PRPF40A-201ENST00000354363 TMEM170BQ5T4T1 132 aa8.33□□□□□ -1.08
PRPF40A-201ENST00000354363 COMMD7Q86VX2 200 aa8.33□□□□□ -1.08
PRPF40A-201ENST00000354363 BAGE3Q86Y29 109 aa8.33□□□□□ -1.08
PRPF40A-201ENST00000354363 CBLN2Q8IUK8 224 aa8.33□□□□□ -1.08
PRPF40A-201ENST00000354363 C3orf22Q8N5N4 141 aa8.33□□□□□ -1.08
PRPF40A-201ENST00000354363 IGLV7-46A0A075B6I9 117 aa8.32□□□□□ -1.08
PRPF40A-201ENST00000354363 LCE2AQ5TA79 106 aaPredicted RBP8.32□□□□□ -1.08
PRPF40A-201ENST00000354363 SFTA2Q6UW10 78 aa8.32□□□□□ -1.08
PRPF40A-201ENST00000354363 TRAPPC1Q9Y5R8 145 aa8.32□□□□□ -1.08
PRPF40A-201ENST00000354363 CDIP1Q9H305 208 aa8.32□□□□□ -1.08
PRPF40A-201ENST00000354363 HIGD2AQ9BW72 106 aa8.31□□□□□ -1.08
PRPF40A-201ENST00000354363 LINC00158P58513 81 aa8.3□□□□□ -1.08
PRPF40A-201ENST00000354363 KRTAP9-2Q9BYQ4 174 aa8.29□□□□□ -1.08
PRPF40A-201ENST00000354363 A0A0U1RRA0 63 aa8.29□□□□□ -1.08
PRPF40A-201ENST00000354363 SPRR4Q96PI1 79 aa8.29□□□□□ -1.08
PRPF40A-201ENST00000354363 CHTOPQ9Y3Y2 248 aaKnown RBP8.29□□□□□ -1.08
PRPF40A-201ENST00000354363 TMEM223A0PJW6 202 aa8.27□□□□□ -1.09
PRPF40A-201ENST00000354363 SPAG11AQ6PDA7 123 aa8.26□□□□□ -1.09
PRPF40A-201ENST00000354363 PPDPFQ9H3Y8 114 aa8.26□□□□□ -1.09
PRPF40A-201ENST00000354363 PRYO14603 147 aa8.25□□□□□ -1.09
PRPF40A-201ENST00000354363 SMIM13P0DJ93 91 aa8.25□□□□□ -1.09
PRPF40A-201ENST00000354363 TRAV12-1A0A0B4J245 112 aa8.24□□□□□ -1.09
PRPF40A-201ENST00000354363 ZNF706Q9Y5V0 76 aaPredicted RBP8.24□□□□□ -1.09
PRPF40A-201ENST00000354363 BOD1L2Q8IYS8 172 aa8.23□□□□□ -1.09
PRPF40A-201ENST00000354363 IFI27L1Q96BM0 104 aa8.23□□□□□ -1.09
PRPF40A-201ENST00000354363 NCR3O14931 201 aa8.22□□□□□ -1.09
PRPF40A-201ENST00000354363 ATP6V1G1O75348 118 aa8.22□□□□□ -1.09
PRPF40A-201ENST00000354363 SPRR1AP35321 89 aa8.22□□□□□ -1.09
PRPF40A-201ENST00000354363 MEIG1Q5JSS6 88 aa8.22□□□□□ -1.09
PRPF40A-201ENST00000354363 LINC00337Q8N6G1 96 aa8.22□□□□□ -1.09
PRPF40A-201ENST00000354363 KCNQ1DNQ9H478 68 aa8.22□□□□□ -1.09
PRPF40A-201ENST00000354363 C4orf48Q5BLP8 95 aa8.21□□□□□ -1.09
PRPF40A-201ENST00000354363 FP248Q71RG6 208 aaPredicted RBP8.21□□□□□ -1.09
PRPF40A-201ENST00000354363 MIR7-3HGQ8N6C7 128 aa8.21□□□□□ -1.09
PRPF40A-201ENST00000354363 DAND5Q8N907 189 aa8.21□□□□□ -1.09
PRPF40A-201ENST00000354363 Q8NBF4 154 aa8.21□□□□□ -1.09
PRPF40A-201ENST00000354363 SMCR5Q8TEV8 140 aa8.21□□□□□ -1.09
PRPF40A-201ENST00000354363 CHCHD1Q96BP2 118 aaKnown RBP8.21□□□□□ -1.09
PRPF40A-201ENST00000354363 KRTAP4-16G5E9R7 235 aaPredicted RBP8.21□□□□□ -1.1
PRPF40A-201ENST00000354363 APOC3P02656 99 aa8.21□□□□□ -1.1
PRPF40A-201ENST00000354363 HERV-K104P63124 156 aa8.2□□□□□ -1.1
PRPF40A-201ENST00000354363 ETDCA0A1B0GVM5 59 aa8.19□□□□□ -1.1
PRPF40A-201ENST00000354363 TRBV10-3A0A0K0K1G6 114 aa8.18□□□□□ -1.1
PRPF40A-201ENST00000354363 SNAPINO95295 136 aa8.18□□□□□ -1.1
PRPF40A-201ENST00000354363 NDUFA12Q9UI09 145 aa8.18□□□□□ -1.1
PRPF40A-201ENST00000354363 KRTAP13-3Q3SY46 172 aa8.18□□□□□ -1.1
PRPF40A-201ENST00000354363 YPEL4Q96NS1 127 aa8.18□□□□□ -1.1
PRPF40A-201ENST00000354363 LINC00587B1AMM8 73 aa8.17□□□□□ -1.1
PRPF40A-201ENST00000354363 LINC00483Q53H64 154 aa8.17□□□□□ -1.1
PRPF40A-201ENST00000354363 SVBPQ8N300 66 aa8.17□□□□□ -1.1
PRPF40A-201ENST00000354363 MYMXA0A1B0GTQ4 84 aa8.16□□□□□ -1.1
PRPF40A-201ENST00000354363 SPINK1P00995 79 aa8.16□□□□□ -1.1
PRPF40A-201ENST00000354363 FAM19A2Q8N3H0 131 aa8.16□□□□□ -1.1
PRPF40A-201ENST00000354363 NDUFA5Q16718 116 aa8.15□□□□□ -1.1
PRPF40A-201ENST00000354363 MAP1LC3CQ9BXW4 147 aa8.15□□□□□ -1.1
PRPF40A-201ENST00000354363 B5MCH6 92 aa8.14□□□□□ -1.11
PRPF40A-201ENST00000354363 GAGE2AQ6NT46 116 aa8.14□□□□□ -1.11
PRPF40A-201ENST00000354363 LOC107984156A0A0G2JMH3 177 aa8.14□□□□□ -1.11
PRPF40A-201ENST00000354363 HSBP1O75506 76 aa8.14□□□□□ -1.11
PRPF40A-201ENST00000354363 ERC2-IT1O76042 136 aa8.14□□□□□ -1.11
PRPF40A-201ENST00000354363 TSPEAR-AS2P59090 65 aa8.14□□□□□ -1.11
PRPF40A-201ENST00000354363 ARL17AQ8IVW1 177 aa8.14□□□□□ -1.11
PRPF40A-201ENST00000354363 H0Y8G0 127 aa8.13□□□□□ -1.11
PRPF40A-201ENST00000354363 S100A12P80511 92 aa8.13□□□□□ -1.11
PRPF40A-201ENST00000354363 ASB16-AS1Q495Z4 193 aa8.13□□□□□ -1.11
PRPF40A-201ENST00000354363 DDTP30046 118 aa8.12□□□□□ -1.11
PRPF40A-201ENST00000354363 MOBPQ13875 183 aa8.12□□□□□ -1.11
PRPF40A-201ENST00000354363 IGLV9-49A0A0B4J1Y8 123 aa8.11□□□□□ -1.11
PRPF40A-201ENST00000354363 TRBV10-2A0A0K0K1G8 114 aa8.11□□□□□ -1.11
PRPF40A-201ENST00000354363 LEPROTO15243 131 aa8.11□□□□□ -1.11
PRPF40A-201ENST00000354363 Q9BRP9 147 aa8.11□□□□□ -1.11
PRPF40A-201ENST00000354363 SSBP3-AS1Q7Z2R9 100 aa8.11□□□□□ -1.11
PRPF40A-201ENST00000354363 RPS29P62273 56 aaKnown RBP8.1□□□□□ -1.11
PRPF40A-201ENST00000354363 Q6ZRX8 168 aa8.09□□□□□ -1.11
PRPF40A-201ENST00000354363 Q8N377 158 aa8.09□□□□□ -1.11
PRPF40A-201ENST00000354363 KRTAP4-1Q9BYQ7 146 aa8.09□□□□□ -1.11
PRPF40A-201ENST00000354363 J3QQQ9 107 aa8.08□□□□□ -1.12
PRPF40A-201ENST00000354363 LEPROTL1O95214 131 aa8.08□□□□□ -1.12
PRPF40A-201ENST00000354363 LINC00310P59036 64 aa8.08□□□□□ -1.12
PRPF40A-201ENST00000354363 SPANXB1Q9NS25 103 aaPredicted RBP8.08□□□□□ -1.12
PRPF40A-201ENST00000354363 PLNP26678 52 aa8.07□□□□□ -1.12
PRPF40A-201ENST00000354363 KRTAP9-6A0A140TA67 174 aa8.07□□□□□ -1.12
PRPF40A-201ENST00000354363 SERF1AO75920 110 aa8.07□□□□□ -1.12
PRPF40A-201ENST00000354363 IGLV6-57P01721 117 aa8.07□□□□□ -1.12
PRPF40A-201ENST00000354363 SEC61BP60468 96 aaKnown RBP8.07□□□□□ -1.12
PRPF40A-201ENST00000354363 NDUFC2O95298 119 aa8.06□□□□□ -1.12
PRPF40A-201ENST00000354363 TRGC2P03986 189 aa8.06□□□□□ -1.12
PRPF40A-201ENST00000354363 NMUP48645 174 aa8.06□□□□□ -1.12
PRPF40A-201ENST00000354363 MIEN1Q9BRT3 115 aa8.06□□□□□ -1.12
PRPF40A-201ENST00000354363 SLC25A20O43772 301 aa8.05□□□□□ -1.12
PRPF40A-201ENST00000354363 DPM2O94777 84 aa8.05□□□□□ -1.12
PRPF40A-201ENST00000354363 HERVK_113P61574 105 aa8.05□□□□□ -1.12
PRPF40A-201ENST00000354363 S100A7L2Q5SY68 101 aa8.05□□□□□ -1.12
PRPF40A-201ENST00000354363 LGALS3P17931 250 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms