RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 K7EIL1 84 aa9.46□□□□□ -0.9
SMC6-201ENST00000351948 LINC01556Q5JQF7 62 aa9.45□□□□□ -0.9
SMC6-201ENST00000351948 SPATA3Q8NHX4 192 aa9.44□□□□□ -0.9
SMC6-201ENST00000351948 A0A087WYN8 130 aa9.44□□□□□ -0.9
SMC6-201ENST00000351948 UPK3BQ9BT76 320 aa9.44□□□□□ -0.9
SMC6-201ENST00000351948 ENHOQ6UWT2 76 aa9.44□□□□□ -0.9
SMC6-201ENST00000351948 MT-ATP8P03928 68 aa9.43□□□□□ -0.9
SMC6-201ENST00000351948 CSNK1G2-AS1Q8NCQ2 148 aa9.43□□□□□ -0.9
SMC6-201ENST00000351948 B5MCH6 92 aa9.43□□□□□ -0.9
SMC6-201ENST00000351948 LINC00588Q9Y4M8 146 aa9.43□□□□□ -0.9
SMC6-201ENST00000351948 REG3GQ6UW15 175 aa9.42□□□□□ -0.9
SMC6-201ENST00000351948 C10orf25Q5T742 122 aa9.42□□□□□ -0.9
SMC6-201ENST00000351948 LINC00643Q86TS7 51 aa9.42□□□□□ -0.9
SMC6-201ENST00000351948 C1orf137Q5JT78 98 aa9.42□□□□□ -0.9
SMC6-201ENST00000351948 GIG44P09565 113 aaPredicted RBP9.41□□□□□ -0.9
SMC6-201ENST00000351948 C2orf48Q96LS8 159 aa9.41□□□□□ -0.9
SMC6-201ENST00000351948 C19orf73Q9NVV2 129 aa9.41□□□□□ -0.9
SMC6-201ENST00000351948 PRLHP81277 87 aa9.41□□□□□ -0.9
SMC6-201ENST00000351948 MRPL55Q7Z7F7 128 aaKnown RBP9.41□□□□□ -0.9
SMC6-201ENST00000351948 LINC00337Q8N6G1 96 aa9.41□□□□□ -0.9
SMC6-201ENST00000351948 MP68P56378 58 aa9.4□□□□□ -0.9
SMC6-201ENST00000351948 NDUFV3P56181 108 aaKnown RBP9.4□□□□□ -0.9
SMC6-201ENST00000351948 MUC7Q8TAX7 377 aa9.39□□□□□ -0.91
SMC6-201ENST00000351948 IGLV5-39A0A0G2JS06 123 aa9.39□□□□□ -0.91
SMC6-201ENST00000351948 Q8N814 137 aa9.39□□□□□ -0.91
SMC6-201ENST00000351948 CFAP47Q6ZTR5 3102 aa9.39□□□□□ -0.91
SMC6-201ENST00000351948 IGKV4-1P06312 121 aa9.38□□□□□ -0.91
SMC6-201ENST00000351948 RPL28P46779 137 aaKnown RBP9.38□□□□□ -0.91
SMC6-201ENST00000351948 KALRNO60229 2985 aa9.38□□□□□ -0.91
SMC6-201ENST00000351948 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.38□□□□□ -0.91
SMC6-201ENST00000351948 ATOX1O00244 68 aa9.37□□□□□ -0.91
SMC6-201ENST00000351948 C6orf48Q9UBA6 75 aa9.37□□□□□ -0.91
SMC6-201ENST00000351948 LINC01546A6NGU7 62 aa9.37□□□□□ -0.91
SMC6-201ENST00000351948 ZNF706Q9Y5V0 76 aaPredicted RBP9.37□□□□□ -0.91
SMC6-201ENST00000351948 ITPR1Q14643 2758 aa9.37□□□□□ -0.91
SMC6-201ENST00000351948 CIRBP-AS1Q8TBR5 109 aa9.37□□□□□ -0.91
SMC6-201ENST00000351948 WFDC13Q8IUB5 93 aa9.36□□□□□ -0.91
SMC6-201ENST00000351948 C22orf24Q9Y442 160 aa9.36□□□□□ -0.91
SMC6-201ENST00000351948 LRBAP50851 2863 aa9.36□□□□□ -0.91
SMC6-201ENST00000351948 NBEAL1Q6ZS30 2694 aa9.35□□□□□ -0.91
SMC6-201ENST00000351948 H3BNG1 76 aa9.35□□□□□ -0.91
SMC6-201ENST00000351948 NBDYA0A0U1RRE5 68 aa9.33□□□□□ -0.92
SMC6-201ENST00000351948 LOC400499M0QZD8 3231 aa9.33□□□□□ -0.92
SMC6-201ENST00000351948 ITPR2Q14571 2701 aa9.33□□□□□ -0.92
SMC6-201ENST00000351948 USP34Q70CQ2 3546 aa9.33□□□□□ -0.92
SMC6-201ENST00000351948 CR1P17927 2039 aa9.32□□□□□ -0.92
SMC6-201ENST00000351948 NDUFC2O95298 119 aa9.32□□□□□ -0.92
SMC6-201ENST00000351948 SOSTDC1Q6X4U4 206 aa9.31□□□□□ -0.92
SMC6-201ENST00000351948 NBEAL2Q6ZNJ1 2754 aa9.31□□□□□ -0.92
SMC6-201ENST00000351948 LINC01561Q8N1V8 128 aa9.31□□□□□ -0.92
SMC6-201ENST00000351948 CHTF8P0CG12 524 aa9.3□□□□□ -0.92
SMC6-201ENST00000351948 SS18L2Q9UHA2 77 aa9.3□□□□□ -0.92
SMC6-201ENST00000351948 IGLV5-45A0A087WSX0 123 aa9.3□□□□□ -0.92
SMC6-201ENST00000351948 C20orf197Q8N268 126 aa9.3□□□□□ -0.92
SMC6-201ENST00000351948 Q9BRP9 147 aa9.3□□□□□ -0.92
SMC6-201ENST00000351948 WWC2-AS2Q96NR7 200 aa9.29□□□□□ -0.92
SMC6-201ENST00000351948 CHKB-CPT1BH3BT56 60 aa9.29□□□□□ -0.92
SMC6-201ENST00000351948 LINC00167Q96N53 147 aa9.29□□□□□ -0.92
SMC6-201ENST00000351948 DEFB116Q30KQ4 102 aa9.29□□□□□ -0.92
SMC6-201ENST00000351948 LINC00575Q6W349 94 aa9.27□□□□□ -0.93
SMC6-201ENST00000351948 F8WDY8 70 aa9.26□□□□□ -0.93
SMC6-201ENST00000351948 PRYO14603 147 aa9.26□□□□□ -0.93
SMC6-201ENST00000351948 DNAH10OSP0CZ25 163 aa9.26□□□□□ -0.93
SMC6-201ENST00000351948 PHF5AQ7RTV0 110 aaKnown RBP9.26□□□□□ -0.93
SMC6-201ENST00000351948 XGP55808 180 aa9.25□□□□□ -0.93
SMC6-201ENST00000351948 SMCR5Q8TEV8 140 aa9.25□□□□□ -0.93
SMC6-201ENST00000351948 A0A087WSZ3 146 aa9.25□□□□□ -0.93
SMC6-201ENST00000351948 RTL8CO15255 209 aa9.24□□□□□ -0.93
SMC6-201ENST00000351948 C3orf22Q8N5N4 141 aa9.23□□□□□ -0.93
SMC6-201ENST00000351948 NSD1Q96L73 2696 aaPredicted RBP9.23□□□□□ -0.93
SMC6-201ENST00000351948 A0A087WVE0 104 aa9.22□□□□□ -0.93
SMC6-201ENST00000351948 ATP5EP2Q5VTU8 51 aa9.22□□□□□ -0.93
SMC6-201ENST00000351948 UTP20O75691 2785 aaKnown RBP9.21□□□□□ -0.93
SMC6-201ENST00000351948 C5orf47Q569G3 176 aa9.21□□□□□ -0.93
SMC6-201ENST00000351948 Q6ZRP5 223 aa9.21□□□□□ -0.93
SMC6-201ENST00000351948 FAM19A3Q7Z5A8 133 aa9.21□□□□□ -0.93
SMC6-201ENST00000351948 FAM168BA1KXE4 195 aa9.21□□□□□ -0.94
SMC6-201ENST00000351948 SMIM20Q8N5G0 67 aa9.2□□□□□ -0.94
SMC6-201ENST00000351948 FAM218AQ96MZ4 157 aa9.19□□□□□ -0.94
SMC6-201ENST00000351948 PRR4Q16378 134 aa9.19□□□□□ -0.94
SMC6-201ENST00000351948 TM2D3Q9BRN9 247 aa9.19□□□□□ -0.94
SMC6-201ENST00000351948 C16orf90A8MZG2 172 aa9.18□□□□□ -0.94
SMC6-201ENST00000351948 KIAA0087Q14695 138 aa9.18□□□□□ -0.94
SMC6-201ENST00000351948 SNURFQ9Y675 71 aa9.18□□□□□ -0.94
SMC6-201ENST00000351948 IGHV6-1A0A0B4J1U7 121 aa9.18□□□□□ -0.94
SMC6-201ENST00000351948 FAM30AQ9NZY2 134 aa9.18□□□□□ -0.94
SMC6-201ENST00000351948 EIF4EBP3O60516 100 aaPredicted RBP9.17□□□□□ -0.94
SMC6-201ENST00000351948 GVQW2A0A096LPI5 108 aaPredicted RBP9.17□□□□□ -0.94
SMC6-201ENST00000351948 RETNLBQ9BQ08 111 aa9.17□□□□□ -0.94
SMC6-201ENST00000351948 LINC00612Q8N6U2 182 aa9.15□□□□□ -0.94
SMC6-201ENST00000351948 CASC2Q6XLA1 102 aa9.15□□□□□ -0.94
SMC6-201ENST00000351948 TMEM258P61165 79 aa9.14□□□□□ -0.95
SMC6-201ENST00000351948 ST20-AS1Q8NBB2 130 aa9.14□□□□□ -0.95
SMC6-201ENST00000351948 LITAFQ99732 161 aa9.13□□□□□ -0.95
SMC6-201ENST00000351948 LINC00846Q9NV44 126 aa9.13□□□□□ -0.95
SMC6-201ENST00000351948 MOBPQ13875 183 aa9.13□□□□□ -0.95
SMC6-201ENST00000351948 CASC10Q5T4H9 136 aa9.13□□□□□ -0.95
SMC6-201ENST00000351948 Q8N9L7 120 aa9.13□□□□□ -0.95
SMC6-201ENST00000351948 ZANQ9Y493 2812 aa9.13□□□□□ -0.95
SMC6-201ENST00000351948 HIVEP1P15822 2718 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms