RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 TRBV7-7A0A0K0K1E9 115 aa11.03□□□□□ -0.64
PTPN11-201ENST00000351677 PCOTHQ58A44 107 aa11.02□□□□□ -0.64
PTPN11-201ENST00000351677 SMCR5Q8TEV8 140 aa11.02□□□□□ -0.64
PTPN11-201ENST00000351677 SPATA3Q8NHX4 192 aa11.01□□□□□ -0.65
PTPN11-201ENST00000351677 ACANP16112 2415 aa11.01□□□□□ -0.65
PTPN11-201ENST00000351677 C1orf134Q5TEV5 83 aa11□□□□□ -0.65
PTPN11-201ENST00000351677 KLK9Q2XQG4 91 aa11□□□□□ -0.65
PTPN11-201ENST00000351677 TMEM254Q8TBM7 123 aa11□□□□□ -0.65
PTPN11-201ENST00000351677 MUC4Q99102 2169 aa10.99□□□□□ -0.65
PTPN11-201ENST00000351677 H0Y9P7 68 aa10.98□□□□□ -0.65
PTPN11-201ENST00000351677 K7ERS5 55 aa10.98□□□□□ -0.65
PTPN11-201ENST00000351677 LINC00167Q96N53 147 aa10.98□□□□□ -0.65
PTPN11-201ENST00000351677 HCG22E2RYF7 251 aa10.98□□□□□ -0.65
PTPN11-201ENST00000351677 CXCL6P80162 114 aa10.97□□□□□ -0.65
PTPN11-201ENST00000351677 SBSPONQ8IVN8 264 aa10.96□□□□□ -0.65
PTPN11-201ENST00000351677 FSHBP01225 129 aa10.96□□□□□ -0.65
PTPN11-201ENST00000351677 C5orf42Q9H799 3197 aa10.95□□□□□ -0.66
PTPN11-201ENST00000351677 TRBV7-6A0A0J9YX20 115 aa10.95□□□□□ -0.66
PTPN11-201ENST00000351677 LITAFQ99732 161 aa10.93□□□□□ -0.66
PTPN11-201ENST00000351677 Q8NAQ8 132 aa10.93□□□□□ -0.66
PTPN11-201ENST00000351677 MDFIQ99750 246 aa10.93□□□□□ -0.66
PTPN11-201ENST00000351677 SMIM29Q86T20 159 aa10.93□□□□□ -0.66
PTPN11-201ENST00000351677 PSPHP1O15172 72 aa10.92□□□□□ -0.66
PTPN11-201ENST00000351677 ELOF1P60002 83 aaKnown RBP10.91□□□□□ -0.66
PTPN11-201ENST00000351677 KRTAP24-1Q3LI83 254 aa10.91□□□□□ -0.66
PTPN11-201ENST00000351677 FASNP49327 2511 aaKnown RBP10.91□□□□□ -0.66
PTPN11-201ENST00000351677 H3BNG1 76 aa10.9□□□□□ -0.66
PTPN11-201ENST00000351677 C1orf195Q5TG92 126 aa10.88□□□□□ -0.67
PTPN11-201ENST00000351677 NHLRC4P0CG21 123 aaPredicted RBP10.88□□□□□ -0.67
PTPN11-201ENST00000351677 Q6ZQT0 140 aa10.87□□□□□ -0.67
PTPN11-201ENST00000351677 PHF5AQ7RTV0 110 aaKnown RBP10.85□□□□□ -0.67
PTPN11-201ENST00000351677 C1orf64Q8NEQ6 169 aa10.85□□□□□ -0.67
PTPN11-201ENST00000351677 SPINK1P00995 79 aa10.85□□□□□ -0.67
PTPN11-201ENST00000351677 CHD7Q9P2D1 2997 aa10.85□□□□□ -0.67
PTPN11-201ENST00000351677 LINC00588Q9Y4M8 146 aa10.84□□□□□ -0.67
PTPN11-201ENST00000351677 ST20-AS1Q8NBB2 130 aa10.84□□□□□ -0.67
PTPN11-201ENST00000351677 MOBPQ13875 183 aa10.83□□□□□ -0.68
PTPN11-201ENST00000351677 Q6ZRX8 168 aa10.83□□□□□ -0.68
PTPN11-201ENST00000351677 CRYGAP11844 174 aa10.82□□□□□ -0.68
PTPN11-201ENST00000351677 EIF4EBP3O60516 100 aaPredicted RBP10.82□□□□□ -0.68
PTPN11-201ENST00000351677 CSNK1G2-AS1Q8NCQ2 148 aa10.82□□□□□ -0.68
PTPN11-201ENST00000351677 hDV103S1A0JD37 113 aa10.81□□□□□ -0.68
PTPN11-201ENST00000351677 PMAIP1Q13794 54 aa10.81□□□□□ -0.68
PTPN11-201ENST00000351677 Q6ZRP5 223 aa10.81□□□□□ -0.68
PTPN11-201ENST00000351677 LINC00476Q8WZB0 136 aa10.81□□□□□ -0.68
PTPN11-201ENST00000351677 LOC110117498A0A087WWA1 95 aa10.81□□□□□ -0.68
PTPN11-201ENST00000351677 GVQW2A0A096LPI5 108 aaPredicted RBP10.78□□□□□ -0.68
PTPN11-201ENST00000351677 Q8NBF4 154 aa10.77□□□□□ -0.68
PTPN11-201ENST00000351677 CHTF8P0CG12 524 aa10.77□□□□□ -0.68
PTPN11-201ENST00000351677 EPM2AB3EWF7 344 aa10.77□□□□□ -0.69
PTPN11-201ENST00000351677 FAM168BA1KXE4 195 aa10.77□□□□□ -0.69
PTPN11-201ENST00000351677 EPG5Q9HCE0 2579 aa10.76□□□□□ -0.69
PTPN11-201ENST00000351677 A0A096LNT2 108 aa10.76□□□□□ -0.69
PTPN11-201ENST00000351677 LIMD2Q9BT23 127 aa10.76□□□□□ -0.69
PTPN11-201ENST00000351677 VPREB1P12018 145 aa10.76□□□□□ -0.69
PTPN11-201ENST00000351677 IGKV2D-30A0A075B6S6 120 aa10.75□□□□□ -0.69
PTPN11-201ENST00000351677 IGKV2-30P06310 120 aa10.75□□□□□ -0.69
PTPN11-201ENST00000351677 IGLV6-57P01721 117 aa10.75□□□□□ -0.69
PTPN11-201ENST00000351677 C16orf90A8MZG2 172 aa10.75□□□□□ -0.69
PTPN11-201ENST00000351677 SPACA4Q8TDM5 124 aa10.75□□□□□ -0.69
PTPN11-201ENST00000351677 TM2D3Q9BRN9 247 aa10.74□□□□□ -0.69
PTPN11-201ENST00000351677 NBDYA0A0U1RRE5 68 aa10.74□□□□□ -0.69
PTPN11-201ENST00000351677 RPL37AP61513 92 aaKnown RBP10.73□□□□□ -0.69
PTPN11-201ENST00000351677 GIG44P09565 113 aaPredicted RBP10.72□□□□□ -0.69
PTPN11-201ENST00000351677 RTL8CO15255 209 aa10.72□□□□□ -0.69
PTPN11-201ENST00000351677 SERTAD4-AS1Q5TG53 156 aa10.72□□□□□ -0.69
PTPN11-201ENST00000351677 BCE1O60756 84 aa10.71□□□□□ -0.69
PTPN11-201ENST00000351677 DNAH10OSP0CZ25 163 aa10.71□□□□□ -0.69
PTPN11-201ENST00000351677 A0A1B0GW54 56 aa10.7□□□□□ -0.7
PTPN11-201ENST00000351677 BPTFQ12830 3046 aa10.7□□□□□ -0.7
PTPN11-201ENST00000351677 KRTAP10-3P60369 221 aa10.69□□□□□ -0.7
PTPN11-201ENST00000351677 C19orf73Q9NVV2 129 aa10.68□□□□□ -0.7
PTPN11-201ENST00000351677 KRTAP10-11P60412 298 aa10.68□□□□□ -0.7
PTPN11-201ENST00000351677 TP53AIP1Q9HCN2 124 aa10.67□□□□□ -0.7
PTPN11-201ENST00000351677 HTTP42858 3142 aa10.67□□□□□ -0.7
PTPN11-201ENST00000351677 C4orf26Q17RF5 130 aa10.66□□□□□ -0.7
PTPN11-201ENST00000351677 F8P00451 2351 aa10.66□□□□□ -0.7
PTPN11-201ENST00000351677 C7orf65Q6ZTY9 151 aa10.65□□□□□ -0.7
PTPN11-201ENST00000351677 IGLV1-50A0A075B6I6 118 aa10.63□□□□□ -0.71
PTPN11-201ENST00000351677 PRR34Q9NV39 138 aa10.62□□□□□ -0.71
PTPN11-201ENST00000351677 C15orf56Q8N910 161 aa10.62□□□□□ -0.71
PTPN11-201ENST00000351677 TRBV7-4A0A0J9YYF1 115 aa10.61□□□□□ -0.71
PTPN11-201ENST00000351677 LINC00528Q8N1L1 170 aa10.61□□□□□ -0.71
PTPN11-201ENST00000351677 KCNQ1DNQ9H478 68 aa10.61□□□□□ -0.71
PTPN11-201ENST00000351677 K7EQZ3 153 aa10.6□□□□□ -0.71
PTPN11-201ENST00000351677 TRAV22A0A0B4J277 110 aa10.6□□□□□ -0.71
PTPN11-201ENST00000351677 CHD9Q3L8U1 2897 aa10.6□□□□□ -0.71
PTPN11-201ENST00000351677 RANBP2P49792 3224 aaKnown RBP10.6□□□□□ -0.71
PTPN11-201ENST00000351677 RPS28P62857 69 aaKnown RBP10.59□□□□□ -0.71
PTPN11-201ENST00000351677 SPAG11AQ6PDA7 123 aa10.59□□□□□ -0.71
PTPN11-201ENST00000351677 K7EIL1 84 aa10.58□□□□□ -0.72
PTPN11-201ENST00000351677 LINC00313P59037 77 aa10.57□□□□□ -0.72
PTPN11-201ENST00000351677 LINC00612Q8N6U2 182 aa10.57□□□□□ -0.72
PTPN11-201ENST00000351677 ACYP2P14621 99 aa10.57□□□□□ -0.72
PTPN11-201ENST00000351677 C9orf129Q5T035 196 aaKnown RBP10.56□□□□□ -0.72
PTPN11-201ENST00000351677 A0A1B0GU69 56 aa10.56□□□□□ -0.72
PTPN11-201ENST00000351677 MKI67P46013 3256 aaKnown RBP10.56□□□□□ -0.72
PTPN11-201ENST00000351677 HECTD1Q9ULT8 2610 aa10.55□□□□□ -0.72
PTPN11-201ENST00000351677 TYMSOSQ8TAI1 123 aa10.55□□□□□ -0.72
PTPN11-201ENST00000351677 PRO0628Q9UI54 55 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms