RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 ATP5EP56381 51 aaPredicted RBP9.62□□□□□ -0.87
RLIM-202ENST00000349225 LINC01006Q8NI28 216 aa9.62□□□□□ -0.87
RLIM-202ENST00000349225 GNLYP22749 145 aa9.62□□□□□ -0.87
RLIM-202ENST00000349225 OCR1Q9BZK8 76 aa9.62□□□□□ -0.87
RLIM-202ENST00000349225 A0A1B0GUV1 79 aa9.61□□□□□ -0.87
RLIM-202ENST00000349225 SEC61GP60059 68 aa9.61□□□□□ -0.87
RLIM-202ENST00000349225 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.61□□□□□ -0.87
RLIM-202ENST00000349225 CACNA1AO00555 2505 aa9.61□□□□□ -0.87
RLIM-202ENST00000349225 IGHV4-31P0DP07 118 aa9.61□□□□□ -0.87
RLIM-202ENST00000349225 CD164L2Q6UWJ8 174 aa9.61□□□□□ -0.87
RLIM-202ENST00000349225 IGKV4-1P06312 121 aa9.6□□□□□ -0.87
RLIM-202ENST00000349225 UNQ6190/PRO20217Q6UXQ8 127 aa9.6□□□□□ -0.87
RLIM-202ENST00000349225 V9GYY9 64 aa9.6□□□□□ -0.87
RLIM-202ENST00000349225 CENPEQ02224 2701 aa9.6□□□□□ -0.87
RLIM-202ENST00000349225 ANKRD17O75179 2603 aaKnown RBP9.6□□□□□ -0.87
RLIM-202ENST00000349225 ZFYVE26Q68DK2 2539 aa9.59□□□□□ -0.87
RLIM-202ENST00000349225 GYPEP15421 78 aa9.59□□□□□ -0.87
RLIM-202ENST00000349225 LINC01356Q8N9X3 169 aa9.59□□□□□ -0.87
RLIM-202ENST00000349225 SETD2Q9BYW2 2564 aaPredicted RBP9.59□□□□□ -0.87
RLIM-202ENST00000349225 PRYO14603 147 aa9.59□□□□□ -0.87
RLIM-202ENST00000349225 FSHBP01225 129 aa9.59□□□□□ -0.87
RLIM-202ENST00000349225 DEFB130BP0DP73 79 aa9.58□□□□□ -0.88
RLIM-202ENST00000349225 DEFB130AP0DP74 79 aa9.58□□□□□ -0.88
RLIM-202ENST00000349225 CHCHD10Q8WYQ3 142 aaPredicted RBP9.58□□□□□ -0.88
RLIM-202ENST00000349225 HIGD2AQ9BW72 106 aa9.58□□□□□ -0.88
RLIM-202ENST00000349225 ERC2-IT1O76042 136 aa9.58□□□□□ -0.88
RLIM-202ENST00000349225 PDE6GP18545 87 aa9.58□□□□□ -0.88
RLIM-202ENST00000349225 ESRGQ1W209 222 aa9.58□□□□□ -0.88
RLIM-202ENST00000349225 GCN1Q92616 2671 aaKnown RBP9.58□□□□□ -0.88
RLIM-202ENST00000349225 LINC00612Q8N6U2 182 aa9.58□□□□□ -0.88
RLIM-202ENST00000349225 C19orf73Q9NVV2 129 aa9.57□□□□□ -0.88
RLIM-202ENST00000349225 LRRK2Q5S007 2527 aa9.57□□□□□ -0.88
RLIM-202ENST00000349225 FUSP35637 526 aaKnown RBP eCLIP9.55□□□□□ -0.88
RLIM-202ENST00000349225 DAD1P61803 113 aa9.54□□□□□ -0.88
RLIM-202ENST00000349225 NAV2Q8IVL1 2488 aa9.54□□□□□ -0.88
RLIM-202ENST00000349225 LRCOL1A6NCL2 159 aa9.54□□□□□ -0.88
RLIM-202ENST00000349225 CYSRT1A8MQ03 144 aa9.52□□□□□ -0.89
RLIM-202ENST00000349225 REG3AQ06141 175 aa9.52□□□□□ -0.89
RLIM-202ENST00000349225 XAGE1AQ9HD64 81 aa9.52□□□□□ -0.89
RLIM-202ENST00000349225 COX7BP24311 80 aa9.51□□□□□ -0.89
RLIM-202ENST00000349225 SPTBN4Q9H254 2564 aa9.51□□□□□ -0.89
RLIM-202ENST00000349225 ANGP03950 147 aaKnown RBP9.51□□□□□ -0.89
RLIM-202ENST00000349225 Q6ZRP5 223 aa9.51□□□□□ -0.89
RLIM-202ENST00000349225 DIRC1Q969H9 104 aa9.51□□□□□ -0.89
RLIM-202ENST00000349225 CCL24O00175 119 aa9.5□□□□□ -0.89
RLIM-202ENST00000349225 ZNF73O43830 326 aaPredicted RBP9.5□□□□□ -0.89
RLIM-202ENST00000349225 KLK12Q9UKR0 248 aa9.5□□□□□ -0.89
RLIM-202ENST00000349225 DOPEY1Q5JWR5 2465 aa9.5□□□□□ -0.89
RLIM-202ENST00000349225 ELOF1P60002 83 aaKnown RBP9.5□□□□□ -0.89
RLIM-202ENST00000349225 SONP18583 2426 aaKnown RBP9.5□□□□□ -0.89
RLIM-202ENST00000349225 hDV103S1A0JD37 113 aa9.49□□□□□ -0.89
RLIM-202ENST00000349225 A0A0J9YWU9 116 aa9.49□□□□□ -0.89
RLIM-202ENST00000349225 IGHV4-30-4P0DP06 118 aa9.49□□□□□ -0.89
RLIM-202ENST00000349225 SPAG11BQ08648 103 aa9.49□□□□□ -0.89
RLIM-202ENST00000349225 CELA1Q9UNI1 258 aa9.48□□□□□ -0.89
RLIM-202ENST00000349225 C3orf84H3BNL1 204 aa9.47□□□□□ -0.89
RLIM-202ENST00000349225 ESM1Q9NQ30 184 aa9.47□□□□□ -0.89
RLIM-202ENST00000349225 FAM30AQ9NZY2 134 aa9.47□□□□□ -0.89
RLIM-202ENST00000349225 ANK3Q12955 4377 aaKnown RBP9.46□□□□□ -0.89
RLIM-202ENST00000349225 PRR15Q8IV56 129 aa9.46□□□□□ -0.89
RLIM-202ENST00000349225 C6orf48Q9UBA6 75 aa9.46□□□□□ -0.89
RLIM-202ENST00000349225 SMIM29Q86T20 159 aa9.46□□□□□ -0.9
RLIM-202ENST00000349225 H3BQ85 93 aa9.45□□□□□ -0.9
RLIM-202ENST00000349225 C1orf64Q8NEQ6 169 aa9.45□□□□□ -0.9
RLIM-202ENST00000349225 UBR5O95071 2799 aaPredicted RBP9.44□□□□□ -0.9
RLIM-202ENST00000349225 PRO0255Q9UI72 69 aa9.44□□□□□ -0.9
RLIM-202ENST00000349225 LCE6AA0A183 80 aa9.43□□□□□ -0.9
RLIM-202ENST00000349225 A8MU10 97 aa9.43□□□□□ -0.9
RLIM-202ENST00000349225 DSCR9P59020 149 aa9.43□□□□□ -0.9
RLIM-202ENST00000349225 LINC00528Q8N1L1 170 aa9.43□□□□□ -0.9
RLIM-202ENST00000349225 Q1T7F1 81 aa9.42□□□□□ -0.9
RLIM-202ENST00000349225 IGLV1-51P01701 117 aa9.41□□□□□ -0.9
RLIM-202ENST00000349225 Q6ZRU5 148 aa9.41□□□□□ -0.9
RLIM-202ENST00000349225 VPREB1P12018 145 aa9.41□□□□□ -0.9
RLIM-202ENST00000349225 ABCA12Q86UK0 2595 aa9.41□□□□□ -0.9
RLIM-202ENST00000349225 PSPHP1O15172 72 aa9.41□□□□□ -0.9
RLIM-202ENST00000349225 X6R8D5 127 aa9.41□□□□□ -0.9
RLIM-202ENST00000349225 PMAIP1Q13794 54 aa9.4□□□□□ -0.9
RLIM-202ENST00000349225 ZCCHC13Q8WW36 166 aaKnown RBP9.4□□□□□ -0.91
RLIM-202ENST00000349225 GVQW2A0A096LPI5 108 aaPredicted RBP9.39□□□□□ -0.91
RLIM-202ENST00000349225 DEFB4AO15263 64 aa9.39□□□□□ -0.91
RLIM-202ENST00000349225 MYO18BQ8IUG5 2567 aa9.37□□□□□ -0.91
RLIM-202ENST00000349225 HIGD2BQ4VC39 106 aa9.37□□□□□ -0.91
RLIM-202ENST00000349225 TRAV22A0A0B4J277 110 aa9.37□□□□□ -0.91
RLIM-202ENST00000349225 IGSF10Q6WRI0 2623 aa9.36□□□□□ -0.91
RLIM-202ENST00000349225 PRR4Q16378 134 aa9.36□□□□□ -0.91
RLIM-202ENST00000349225 KMT2BQ9UMN6 2715 aaPredicted RBP9.36□□□□□ -0.91
RLIM-202ENST00000349225 PKD1L2Q7Z442 2459 aa9.35□□□□□ -0.91
RLIM-202ENST00000349225 Q8N377 158 aa9.35□□□□□ -0.91
RLIM-202ENST00000349225 PIEZO1Q92508 2521 aa9.35□□□□□ -0.91
RLIM-202ENST00000349225 CMC4P56277 68 aaPredicted RBP9.35□□□□□ -0.91
RLIM-202ENST00000349225 VWFP04275 2813 aa9.34□□□□□ -0.91
RLIM-202ENST00000349225 PRR34Q9NV39 138 aa9.34□□□□□ -0.91
RLIM-202ENST00000349225 DNAJC9-AS1A6NH13 148 aa9.34□□□□□ -0.91
RLIM-202ENST00000349225 DEFB105AQ8NG35 78 aa9.34□□□□□ -0.91
RLIM-202ENST00000349225 ST20-AS1Q8NBB2 130 aa9.33□□□□□ -0.92
RLIM-202ENST00000349225 ACACBO00763 2458 aa9.33□□□□□ -0.92
RLIM-202ENST00000349225 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.33□□□□□ -0.92
RLIM-202ENST00000349225 A0A1W2PNM2 257 aa9.33□□□□□ -0.92
RLIM-202ENST00000349225 CCDC168Q8NDH2 2452 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms