RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 TRACP01848 142 aa9.5□□□□□ -0.89
TRIM4-201ENST00000349062 SMIM11BQ8TCY0 68 aa9.5□□□□□ -0.89
TRIM4-201ENST00000349062 ANK2Q01484 3957 aa9.5□□□□□ -0.89
TRIM4-201ENST00000349062 C10orf25Q5T742 122 aa9.49□□□□□ -0.89
TRIM4-201ENST00000349062 IMUPQ9GZP8 106 aa9.49□□□□□ -0.89
TRIM4-201ENST00000349062 XAGE1AQ9HD64 81 aa9.49□□□□□ -0.89
TRIM4-201ENST00000349062 DEFB131BA0A096LNP1 70 aa9.48□□□□□ -0.89
TRIM4-201ENST00000349062 TRAV13-2A0A0B4J235 113 aa9.48□□□□□ -0.89
TRIM4-201ENST00000349062 SPAG11BQ08648 103 aa9.48□□□□□ -0.89
TRIM4-201ENST00000349062 LYPD5Q6UWN5 251 aa9.48□□□□□ -0.89
TRIM4-201ENST00000349062 C11orf45Q8TAV5 145 aa9.47□□□□□ -0.89
TRIM4-201ENST00000349062 A0A1B0GUV1 79 aa9.47□□□□□ -0.89
TRIM4-201ENST00000349062 COX7CP15954 63 aa9.47□□□□□ -0.89
TRIM4-201ENST00000349062 CD164L2Q6UWJ8 174 aa9.47□□□□□ -0.89
TRIM4-201ENST00000349062 LINC00846Q9NV44 126 aa9.47□□□□□ -0.89
TRIM4-201ENST00000349062 LINC01600Q96MT4 127 aa9.47□□□□□ -0.89
TRIM4-201ENST00000349062 IGKV2-28A0A075B6P5 120 aa9.46□□□□□ -0.89
TRIM4-201ENST00000349062 IGKV2D-28P01615 120 aa9.46□□□□□ -0.89
TRIM4-201ENST00000349062 IGKV2D-24A0A075B6R9 120 aa9.46□□□□□ -0.9
TRIM4-201ENST00000349062 LELP1Q5T871 98 aa9.46□□□□□ -0.9
TRIM4-201ENST00000349062 FAM19A5Q7Z5A7 132 aaPredicted RBP9.45□□□□□ -0.9
TRIM4-201ENST00000349062 CYSTM1Q9H1C7 97 aa9.45□□□□□ -0.9
TRIM4-201ENST00000349062 DSCR8Q96T75 97 aa9.45□□□□□ -0.9
TRIM4-201ENST00000349062 C22orf24Q9Y442 160 aa9.44□□□□□ -0.9
TRIM4-201ENST00000349062 FAM19A3Q7Z5A8 133 aa9.44□□□□□ -0.9
TRIM4-201ENST00000349062 IBA57-AS1B1ANH7 110 aa9.44□□□□□ -0.9
TRIM4-201ENST00000349062 ESRGQ1W209 222 aa9.44□□□□□ -0.9
TRIM4-201ENST00000349062 ATOX1O00244 68 aa9.43□□□□□ -0.9
TRIM4-201ENST00000349062 ENHOQ6UWT2 76 aa9.43□□□□□ -0.9
TRIM4-201ENST00000349062 TRAV23DV6A0A075B6W5 121 aa9.43□□□□□ -0.9
TRIM4-201ENST00000349062 J3KT08 172 aa9.43□□□□□ -0.9
TRIM4-201ENST00000349062 CXCL5P42830 114 aa9.42□□□□□ -0.9
TRIM4-201ENST00000349062 S100A7L2Q5SY68 101 aa9.41□□□□□ -0.9
TRIM4-201ENST00000349062 ZNF561-AS1K7EIQ3 104 aa9.41□□□□□ -0.9
TRIM4-201ENST00000349062 RPL28P46779 137 aaKnown RBP9.41□□□□□ -0.9
TRIM4-201ENST00000349062 Q8IZM0 81 aa9.41□□□□□ -0.9
TRIM4-201ENST00000349062 RPL18AQ02543 176 aaKnown RBP9.41□□□□□ -0.9
TRIM4-201ENST00000349062 USP17L23D6RBM5 183 aa9.4□□□□□ -0.91
TRIM4-201ENST00000349062 KIAA0087Q14695 138 aa9.39□□□□□ -0.91
TRIM4-201ENST00000349062 CAMK2N2Q96S95 79 aa9.38□□□□□ -0.91
TRIM4-201ENST00000349062 ORMDL1Q9P0S3 153 aa9.37□□□□□ -0.91
TRIM4-201ENST00000349062 H0YGX0 51 aa9.37□□□□□ -0.91
TRIM4-201ENST00000349062 C2orf48Q96LS8 159 aa9.37□□□□□ -0.91
TRIM4-201ENST00000349062 Q8NDZ9 215 aa9.37□□□□□ -0.91
TRIM4-201ENST00000349062 C1orf43Q9BWL3 253 aa9.37□□□□□ -0.91
TRIM4-201ENST00000349062 FAM19A1Q7Z5A9 133 aa9.36□□□□□ -0.91
TRIM4-201ENST00000349062 LINC01561Q8N1V8 128 aa9.35□□□□□ -0.91
TRIM4-201ENST00000349062 SERP2Q8N6R1 65 aa9.35□□□□□ -0.91
TRIM4-201ENST00000349062 GHRHP01286 108 aa9.35□□□□□ -0.91
TRIM4-201ENST00000349062 C6orf99Q4VX62 202 aa9.34□□□□□ -0.91
TRIM4-201ENST00000349062 C20orf197Q8N268 126 aa9.34□□□□□ -0.91
TRIM4-201ENST00000349062 K7EIL1 84 aa9.33□□□□□ -0.92
TRIM4-201ENST00000349062 WIPF1O43516 503 aa9.33□□□□□ -0.92
TRIM4-201ENST00000349062 CRYGAP11844 174 aa9.33□□□□□ -0.92
TRIM4-201ENST00000349062 HAMPP81172 84 aa9.33□□□□□ -0.92
TRIM4-201ENST00000349062 EGFEM1PQ0D2K5 195 aa9.33□□□□□ -0.92
TRIM4-201ENST00000349062 MDFIQ99750 246 aa9.32□□□□□ -0.92
TRIM4-201ENST00000349062 CSMD3Q7Z407 3707 aa9.32□□□□□ -0.92
TRIM4-201ENST00000349062 LAMTOR3Q9UHA4 124 aa9.32□□□□□ -0.92
TRIM4-201ENST00000349062 C6orf48Q9UBA6 75 aa9.32□□□□□ -0.92
TRIM4-201ENST00000349062 COL7A1Q02388 2944 aa9.31□□□□□ -0.92
TRIM4-201ENST00000349062 C4orf26Q17RF5 130 aa9.31□□□□□ -0.92
TRIM4-201ENST00000349062 HRCT1Q6UXD1 115 aa9.31□□□□□ -0.92
TRIM4-201ENST00000349062 Q6JHZ5 121 aa9.3□□□□□ -0.92
TRIM4-201ENST00000349062 Q6ZRU5 148 aa9.3□□□□□ -0.92
TRIM4-201ENST00000349062 C5orf47Q569G3 176 aa9.3□□□□□ -0.92
TRIM4-201ENST00000349062 DPH3Q96FX2 82 aa9.3□□□□□ -0.92
TRIM4-201ENST00000349062 CASC10Q5T4H9 136 aa9.29□□□□□ -0.92
TRIM4-201ENST00000349062 PRR34Q9NV39 138 aa9.29□□□□□ -0.92
TRIM4-201ENST00000349062 UBL5Q9BZL1 73 aa9.28□□□□□ -0.92
TRIM4-201ENST00000349062 CCKP06307 115 aa9.27□□□□□ -0.93
TRIM4-201ENST00000349062 SCXQ7RTU7 201 aa9.26□□□□□ -0.93
TRIM4-201ENST00000349062 TRBV10-3A0A0K0K1G6 114 aa9.26□□□□□ -0.93
TRIM4-201ENST00000349062 UPK3BQ9BT76 320 aa9.26□□□□□ -0.93
TRIM4-201ENST00000349062 LINC00588Q9Y4M8 146 aa9.26□□□□□ -0.93
TRIM4-201ENST00000349062 TMEM258P61165 79 aa9.25□□□□□ -0.93
TRIM4-201ENST00000349062 SNURFQ9Y675 71 aa9.25□□□□□ -0.93
TRIM4-201ENST00000349062 Q8N814 137 aa9.25□□□□□ -0.93
TRIM4-201ENST00000349062 TRAV10A0A0B4J240 114 aa9.24□□□□□ -0.93
TRIM4-201ENST00000349062 OXTP01178 125 aa9.24□□□□□ -0.93
TRIM4-201ENST00000349062 UBE2DNLQ8IWF7 75 aa9.23□□□□□ -0.93
TRIM4-201ENST00000349062 TMEM256-PLSCR3K7ERE1 68 aa9.23□□□□□ -0.93
TRIM4-201ENST00000349062 C15orf56Q8N910 161 aa9.23□□□□□ -0.93
TRIM4-201ENST00000349062 JMJD7-PLA2G4BH0Y9G9 81 aa9.22□□□□□ -0.93
TRIM4-201ENST00000349062 COX17Q14061 63 aa9.22□□□□□ -0.93
TRIM4-201ENST00000349062 RPL37AP8A6NKH3 93 aa9.21□□□□□ -0.94
TRIM4-201ENST00000349062 CMYA5Q8N3K9 4069 aa9.21□□□□□ -0.94
TRIM4-201ENST00000349062 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.21□□□□□ -0.94
TRIM4-201ENST00000349062 M0R2N4 97 aa9.21□□□□□ -0.94
TRIM4-201ENST00000349062 RBM3P98179 157 aaKnown RBP9.2□□□□□ -0.94
TRIM4-201ENST00000349062 SYCNQ0VAF6 134 aa9.2□□□□□ -0.94
TRIM4-201ENST00000349062 DEFB105AQ8NG35 78 aa9.2□□□□□ -0.94
TRIM4-201ENST00000349062 Q6ZRP5 223 aa9.19□□□□□ -0.94
TRIM4-201ENST00000349062 TGP01266 2768 aa9.19□□□□□ -0.94
TRIM4-201ENST00000349062 LINC01556Q5JQF7 62 aa9.19□□□□□ -0.94
TRIM4-201ENST00000349062 Q6ZQY7 126 aa9.19□□□□□ -0.94
TRIM4-201ENST00000349062 IGKV2-24A0A0C4DH68 120 aa9.18□□□□□ -0.94
TRIM4-201ENST00000349062 PSCAO43653 123 aa9.18□□□□□ -0.94
TRIM4-201ENST00000349062 RPS28P62857 69 aaKnown RBP9.18□□□□□ -0.94
TRIM4-201ENST00000349062 OBSCN-AS1Q96MR7 158 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms