RNA–Protein interactions for RNA: ENST00000343115.8

RDX-201, Transcript of radixin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDX, Length 4,491 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-201ENST00000343115 Q6ZTC4 211 aa11.37□□□□□ -0.59
RDX-201ENST00000343115 M0QXV9 152 aa11.37□□□□□ -0.59
RDX-201ENST00000343115 C3orf84H3BNL1 204 aa11.36□□□□□ -0.59
RDX-201ENST00000343115 COX17Q14061 63 aa11.36□□□□□ -0.59
RDX-201ENST00000343115 WFDC10BQ8IUB3 73 aa11.35□□□□□ -0.59
RDX-201ENST00000343115 NBEAL1Q6ZS30 2694 aa11.35□□□□□ -0.59
RDX-201ENST00000343115 ZNF73O43830 326 aaPredicted RBP11.35□□□□□ -0.59
RDX-201ENST00000343115 CCKP06307 115 aa11.35□□□□□ -0.59
RDX-201ENST00000343115 X6R8D5 127 aa11.35□□□□□ -0.59
RDX-201ENST00000343115 A0A0J9YWU9 116 aa11.34□□□□□ -0.59
RDX-201ENST00000343115 RPL37AP8A6NKH3 93 aa11.34□□□□□ -0.59
RDX-201ENST00000343115 GIG44P09565 113 aaPredicted RBP11.34□□□□□ -0.59
RDX-201ENST00000343115 KLK5Q9Y337 293 aaPredicted RBP11.33□□□□□ -0.6
RDX-201ENST00000343115 C10orf25Q5T742 122 aa11.33□□□□□ -0.6
RDX-201ENST00000343115 HIGD2AQ9BW72 106 aa11.33□□□□□ -0.6
RDX-201ENST00000343115 FAM19A5Q7Z5A7 132 aaPredicted RBP11.33□□□□□ -0.6
RDX-201ENST00000343115 APCP25054 2843 aa11.33□□□□□ -0.6
RDX-201ENST00000343115 COX7CP15954 63 aa11.32□□□□□ -0.6
RDX-201ENST00000343115 J3KT08 172 aa11.32□□□□□ -0.6
RDX-201ENST00000343115 PDE6GP18545 87 aa11.32□□□□□ -0.6
RDX-201ENST00000343115 A0A096LNI7 61 aa11.31□□□□□ -0.6
RDX-201ENST00000343115 SERP2Q8N6R1 65 aa11.31□□□□□ -0.6
RDX-201ENST00000343115 BAHCC1Q9P281 2608 aa11.3□□□□□ -0.6
RDX-201ENST00000343115 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.3□□□□□ -0.6
RDX-201ENST00000343115 FAM19A1Q7Z5A9 133 aa11.3□□□□□ -0.6
RDX-201ENST00000343115 CSMD1Q96PZ7 3565 aa11.3□□□□□ -0.6
RDX-201ENST00000343115 BPY2O14599 106 aa11.3□□□□□ -0.6
RDX-201ENST00000343115 Q6JHZ5 121 aa11.29□□□□□ -0.6
RDX-201ENST00000343115 LYPD5Q6UWN5 251 aa11.29□□□□□ -0.6
RDX-201ENST00000343115 M0R378 163 aa11.28□□□□□ -0.6
RDX-201ENST00000343115 SNURFQ9Y675 71 aa11.28□□□□□ -0.6
RDX-201ENST00000343115 KRTAP1-3Q8IUG1 177 aa11.27□□□□□ -0.6
RDX-201ENST00000343115 CSNK1G2-AS1Q8NCQ2 148 aa11.27□□□□□ -0.6
RDX-201ENST00000343115 PLAC8L1A1L4L8 177 aa11.26□□□□□ -0.61
RDX-201ENST00000343115 FAM104AQ969W3 186 aa11.26□□□□□ -0.61
RDX-201ENST00000343115 H3BQ85 93 aa11.25□□□□□ -0.61
RDX-201ENST00000343115 C19orf73Q9NVV2 129 aa11.25□□□□□ -0.61
RDX-201ENST00000343115 ATP5EP2Q5VTU8 51 aa11.25□□□□□ -0.61
RDX-201ENST00000343115 TRBV7-7A0A0K0K1E9 115 aa11.24□□□□□ -0.61
RDX-201ENST00000343115 NDUFC2O95298 119 aa11.24□□□□□ -0.61
RDX-201ENST00000343115 Q6ZRU5 148 aa11.24□□□□□ -0.61
RDX-201ENST00000343115 LINC00575Q6W349 94 aa11.23□□□□□ -0.61
RDX-201ENST00000343115 EGFEM1PQ0D2K5 195 aa11.22□□□□□ -0.61
RDX-201ENST00000343115 CELSR1Q9NYQ6 3014 aa11.21□□□□□ -0.61
RDX-201ENST00000343115 SMCR5Q8TEV8 140 aa11.21□□□□□ -0.62
RDX-201ENST00000343115 CR1P17927 2039 aa11.21□□□□□ -0.62
RDX-201ENST00000343115 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.2□□□□□ -0.62
RDX-201ENST00000343115 IL17DQ8TAD2 202 aa11.2□□□□□ -0.62
RDX-201ENST00000343115 MXRA5Q9NR99 2828 aa11.19□□□□□ -0.62
RDX-201ENST00000343115 CDK2AP2O75956 126 aa11.19□□□□□ -0.62
RDX-201ENST00000343115 TRAV10A0A0B4J240 114 aa11.19□□□□□ -0.62
RDX-201ENST00000343115 UBE2AP49459 152 aa11.19□□□□□ -0.62
RDX-201ENST00000343115 C6orf48Q9UBA6 75 aa11.18□□□□□ -0.62
RDX-201ENST00000343115 PPDPFQ9H3Y8 114 aa11.18□□□□□ -0.62
RDX-201ENST00000343115 NDUFC2-KCTD14E9PQ53 114 aa11.17□□□□□ -0.62
RDX-201ENST00000343115 KRTAP10-3P60369 221 aa11.17□□□□□ -0.62
RDX-201ENST00000343115 SVEP1Q4LDE5 3571 aa11.17□□□□□ -0.62
RDX-201ENST00000343115 NHLRC4P0CG21 123 aaPredicted RBP11.16□□□□□ -0.62
RDX-201ENST00000343115 Q8NAQ8 132 aa11.16□□□□□ -0.62
RDX-201ENST00000343115 ESRGQ1W209 222 aa11.15□□□□□ -0.62
RDX-201ENST00000343115 FAM236DA0A1B0GTK5 79 aa11.15□□□□□ -0.62
RDX-201ENST00000343115 FAM236CP0DP71 79 aa11.15□□□□□ -0.62
RDX-201ENST00000343115 C9orf129Q5T035 196 aaKnown RBP11.15□□□□□ -0.62
RDX-201ENST00000343115 LOC107984640A0A0U1RRK4 108 aa11.15□□□□□ -0.63
RDX-201ENST00000343115 Q6ZVQ6 151 aa11.14□□□□□ -0.63
RDX-201ENST00000343115 MUC7Q8TAX7 377 aa11.14□□□□□ -0.63
RDX-201ENST00000343115 HIVEP1P15822 2718 aa11.14□□□□□ -0.63
RDX-201ENST00000343115 KRTAP1-1Q07627 177 aa11.14□□□□□ -0.63
RDX-201ENST00000343115 LINC01561Q8N1V8 128 aa11.14□□□□□ -0.63
RDX-201ENST00000343115 Q8N9L7 120 aa11.14□□□□□ -0.63
RDX-201ENST00000343115 SPATA3Q8NHX4 192 aa11.14□□□□□ -0.63
RDX-201ENST00000343115 NIPBLQ6KC79 2804 aaeCLIP11.12□□□□□ -0.63
RDX-201ENST00000343115 FAM19A3Q7Z5A8 133 aa11.12□□□□□ -0.63
RDX-201ENST00000343115 TMEM258P61165 79 aa11.11□□□□□ -0.63
RDX-201ENST00000343115 NDUFS5O43920 106 aa11.11□□□□□ -0.63
RDX-201ENST00000343115 LINC01547P58512 204 aaPredicted RBP11.09□□□□□ -0.63
RDX-201ENST00000343115 NSD1Q96L73 2696 aaPredicted RBP11.09□□□□□ -0.63
RDX-201ENST00000343115 KRTAP24-1Q3LI83 254 aa11.09□□□□□ -0.63
RDX-201ENST00000343115 KIAA0087Q14695 138 aa11.09□□□□□ -0.63
RDX-201ENST00000343115 M0R2N4 97 aa11.08□□□□□ -0.64
RDX-201ENST00000343115 PRR4Q16378 134 aa11.08□□□□□ -0.64
RDX-201ENST00000343115 H0Y9J4 135 aa11.08□□□□□ -0.64
RDX-201ENST00000343115 WFDC13Q8IUB5 93 aa11.07□□□□□ -0.64
RDX-201ENST00000343115 DHRS4-AS1Q9P1J3 65 aa11.07□□□□□ -0.64
RDX-201ENST00000343115 MPLKIPQ8TAP9 179 aa11.07□□□□□ -0.64
RDX-201ENST00000343115 SPENQ96T58 3664 aaKnown RBP11.06□□□□□ -0.64
RDX-201ENST00000343115 CUBNO60494 3623 aa11.06□□□□□ -0.64
RDX-201ENST00000343115 C1orf137Q5JT78 98 aa11.05□□□□□ -0.64
RDX-201ENST00000343115 MP68P56378 58 aa11.04□□□□□ -0.64
RDX-201ENST00000343115 FAM30AQ9NZY2 134 aa11.04□□□□□ -0.64
RDX-201ENST00000343115 TRAV7A0A075B6U4 112 aa11.03□□□□□ -0.64
RDX-201ENST00000343115 C2orf48Q96LS8 159 aa11.03□□□□□ -0.64
RDX-201ENST00000343115 DEFB116Q30KQ4 102 aa11.03□□□□□ -0.64
RDX-201ENST00000343115 C7orf33Q8WU49 177 aa11.03□□□□□ -0.64
RDX-201ENST00000343115 NDUFB1O75438 58 aa11□□□□□ -0.65
RDX-201ENST00000343115 Q6ZQT0 140 aa11□□□□□ -0.65
RDX-201ENST00000343115 LINC00612Q8N6U2 182 aa10.99□□□□□ -0.65
RDX-201ENST00000343115 PRLHP81277 87 aa10.99□□□□□ -0.65
RDX-201ENST00000343115 B9D2Q9BPU9 175 aa10.98□□□□□ -0.65
RDX-201ENST00000343115 LINC01556Q5JQF7 62 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms