RNA–Protein interactions for RNA: ENST00000342895.7

LRRC39-201, Transcript of leucine rich repeat containing 39, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRC39, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-201ENST00000342895 UQCR11O14957 56 aa1.92□□□□□ -2.1
LRRC39-201ENST00000342895 IGKV4-1P06312 121 aa1.92□□□□□ -2.1
LRRC39-201ENST00000342895 MGPP08493 103 aa1.92□□□□□ -2.1
LRRC39-201ENST00000342895 Q6ZTI0 123 aa1.92□□□□□ -2.1
LRRC39-201ENST00000342895 COA5Q86WW8 74 aa1.92□□□□□ -2.1
LRRC39-201ENST00000342895 RNF5Q99942 180 aa1.92□□□□□ -2.1
LRRC39-201ENST00000342895 SORL1Q92673 2214 aa1.91□□□□□ -2.1
LRRC39-201ENST00000342895 IGLV4-60A0A075B6I1 120 aa1.91□□□□□ -2.1
LRRC39-201ENST00000342895 A0A087WTM6 91 aa1.91□□□□□ -2.1
LRRC39-201ENST00000342895 IGKV2-29A2NJV5 120 aaPredicted RBP1.91□□□□□ -2.1
LRRC39-201ENST00000342895 PDE6HQ13956 83 aa1.91□□□□□ -2.1
LRRC39-201ENST00000342895 SMIM2Q9BVW6 85 aa1.91□□□□□ -2.1
LRRC39-201ENST00000342895 KCNQ1DNQ9H478 68 aa1.91□□□□□ -2.1
LRRC39-201ENST00000342895 F5P12259 2224 aa1.91□□□□□ -2.1
LRRC39-201ENST00000342895 MED13LQ71F56 2210 aa1.91□□□□□ -2.1
LRRC39-201ENST00000342895 TRGV4A0A0C4DH28 118 aa1.9□□□□□ -2.1
LRRC39-201ENST00000342895 ETDCA0A1B0GVM5 59 aa1.9□□□□□ -2.1
LRRC39-201ENST00000342895 DEFB112Q30KQ8 113 aa1.9□□□□□ -2.1
LRRC39-201ENST00000342895 LINC00472Q9H8W2 130 aa1.9□□□□□ -2.1
LRRC39-201ENST00000342895 IGLV3-1P01715 115 aa1.9□□□□□ -2.11
LRRC39-201ENST00000342895 CRIP1P50238 77 aa1.9□□□□□ -2.11
LRRC39-201ENST00000342895 LINC00308Q8TCZ7 52 aa1.9□□□□□ -2.11
LRRC39-201ENST00000342895 PTPRQQ9UMZ3 2332 aa1.89□□□□□ -2.11
LRRC39-201ENST00000342895 TRGV2A0A075B6R0 118 aa1.89□□□□□ -2.11
LRRC39-201ENST00000342895 IGLV7-43P04211 117 aa1.89□□□□□ -2.11
LRRC39-201ENST00000342895 COL4A5P29400 1685 aa1.88□□□□□ -2.11
LRRC39-201ENST00000342895 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.88□□□□□ -2.11
LRRC39-201ENST00000342895 TRBV6-4A0A1B0GX49 114 aa1.88□□□□□ -2.11
LRRC39-201ENST00000342895 CCL22O00626 93 aa1.88□□□□□ -2.11
LRRC39-201ENST00000342895 PATE1Q8WXA2 126 aa1.88□□□□□ -2.11
LRRC39-201ENST00000342895 RPS27P42677 84 aaKnown RBP1.88□□□□□ -2.11
LRRC39-201ENST00000342895 KMT2BQ9UMN6 2715 aaPredicted RBP1.87□□□□□ -2.11
LRRC39-201ENST00000342895 NBDYA0A0U1RRE5 68 aa1.87□□□□□ -2.11
LRRC39-201ENST00000342895 NDUFA1O15239 70 aa1.87□□□□□ -2.11
LRRC39-201ENST00000342895 PLCE1Q9P212 2302 aa1.87□□□□□ -2.11
LRRC39-201ENST00000342895 AHCTF1Q8WYP5 2266 aa1.87□□□□□ -2.11
LRRC39-201ENST00000342895 PRB1P04280 392 aa1.86□□□□□ -2.11
LRRC39-201ENST00000342895 DEFB132Q7Z7B7 95 aa1.86□□□□□ -2.11
LRRC39-201ENST00000342895 ST20-AS1Q8NBB2 130 aa1.86□□□□□ -2.11
LRRC39-201ENST00000342895 M0R2N4 97 aa1.86□□□□□ -2.11
LRRC39-201ENST00000342895 COX7BP24311 80 aa1.86□□□□□ -2.11
LRRC39-201ENST00000342895 DEFB116Q30KQ4 102 aa1.86□□□□□ -2.11
LRRC39-201ENST00000342895 LCE1CQ5T751 118 aa1.86□□□□□ -2.11
LRRC39-201ENST00000342895 LCE1BQ5T7P3 118 aa1.86□□□□□ -2.11
LRRC39-201ENST00000342895 SPINT4Q6UDR6 99 aa1.86□□□□□ -2.11
LRRC39-201ENST00000342895 SMIM11BQ8TCY0 68 aa1.86□□□□□ -2.11
LRRC39-201ENST00000342895 Q96NJ1 140 aa1.86□□□□□ -2.11
LRRC39-201ENST00000342895 URB1O60287 2271 aaKnown RBP1.85□□□□□ -2.11
LRRC39-201ENST00000342895 COL27A1Q8IZC6 1860 aaPredicted RBP1.85□□□□□ -2.11
LRRC39-201ENST00000342895 Q8N9L7 120 aa1.85□□□□□ -2.11
LRRC39-201ENST00000342895 PRO2289Q9P1D8 64 aa1.85□□□□□ -2.11
LRRC39-201ENST00000342895 ABCA1O95477 2261 aa1.84□□□□□ -2.11
LRRC39-201ENST00000342895 IGKV2-40A0A087WW87 121 aaPredicted RBP1.84□□□□□ -2.11
LRRC39-201ENST00000342895 TRGV1A0A0A0MS02 117 aa1.84□□□□□ -2.11
LRRC39-201ENST00000342895 IGKV2D-40P01614 121 aaPredicted RBP1.84□□□□□ -2.11
LRRC39-201ENST00000342895 BRWD1Q9NSI6 2320 aa1.84□□□□□ -2.11
LRRC39-201ENST00000342895 MUC5BQ9HC84 5762 aaPredicted RBP1.84□□□□□ -2.11
LRRC39-201ENST00000342895 USF3Q68DE3 2245 aa1.84□□□□□ -2.12
LRRC39-201ENST00000342895 KNL1Q8NG31 2342 aa1.84□□□□□ -2.12
LRRC39-201ENST00000342895 LINC00158P58513 81 aa1.84□□□□□ -2.12
LRRC39-201ENST00000342895 LINC00315P59091 139 aa1.84□□□□□ -2.12
LRRC39-201ENST00000342895 TECTAO75443 2155 aa1.83□□□□□ -2.12
LRRC39-201ENST00000342895 IGKV2-28A0A075B6P5 120 aa1.83□□□□□ -2.12
LRRC39-201ENST00000342895 A0A1B0GU69 56 aa1.83□□□□□ -2.12
LRRC39-201ENST00000342895 IGKV2D-28P01615 120 aa1.83□□□□□ -2.12
LRRC39-201ENST00000342895 POLR2KP53803 58 aaKnown RBP1.83□□□□□ -2.12
LRRC39-201ENST00000342895 PIGYQ3MUY2 71 aa1.83□□□□□ -2.12
LRRC39-201ENST00000342895 SPINK9Q5DT21 86 aa1.83□□□□□ -2.12
LRRC39-201ENST00000342895 COL4A2P08572 1712 aa1.82□□□□□ -2.12
LRRC39-201ENST00000342895 KRTAP10-1P60331 282 aa1.82□□□□□ -2.12
LRRC39-201ENST00000342895 DEFB106AQ8N104 65 aa1.82□□□□□ -2.12
LRRC39-201ENST00000342895 DOPEY2Q9Y3R5 2298 aa1.82□□□□□ -2.12
LRRC39-201ENST00000342895 COX17Q14061 63 aa1.82□□□□□ -2.12
LRRC39-201ENST00000342895 C5orf56Q8N8D9 126 aa1.82□□□□□ -2.12
LRRC39-201ENST00000342895 LINC00304Q8N9R0 145 aa1.82□□□□□ -2.12
LRRC39-201ENST00000342895 LCE3DQ9BYE3 92 aa1.82□□□□□ -2.12
LRRC39-201ENST00000342895 PSORS1C2Q9UIG4 136 aa1.82□□□□□ -2.12
LRRC39-201ENST00000342895 CNOT1A5YKK6 2376 aaKnown RBP1.81□□□□□ -2.12
LRRC39-201ENST00000342895 CNTRLQ7Z7A1 2325 aa1.81□□□□□ -2.12
LRRC39-201ENST00000342895 A0A1W2PNN7 141 aa1.81□□□□□ -2.12
LRRC39-201ENST00000342895 RPL39P62891 51 aaKnown RBP1.81□□□□□ -2.12
LRRC39-201ENST00000342895 PRB3Q04118 309 aaPredicted RBP1.81□□□□□ -2.12
LRRC39-201ENST00000342895 C4orf3Q8WVX3 66 aa1.81□□□□□ -2.12
LRRC39-201ENST00000342895 R4GN34 69 aa1.81□□□□□ -2.12
LRRC39-201ENST00000342895 RTTNQ86VV8 2226 aa1.8□□□□□ -2.12
LRRC39-201ENST00000342895 DEFB131BA0A096LNP1 70 aa1.8□□□□□ -2.12
LRRC39-201ENST00000342895 HRES1P13985 223 aa1.8□□□□□ -2.12
LRRC39-201ENST00000342895 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.8□□□□□ -2.12
LRRC39-201ENST00000342895 ALMS1Q8TCU4 4167 aa1.8□□□□□ -2.12
LRRC39-201ENST00000342895 A0A096LNT2 108 aa1.8□□□□□ -2.12
LRRC39-201ENST00000342895 RPL37AP61513 92 aaKnown RBP1.8□□□□□ -2.12
LRRC39-201ENST00000342895 Q6ZQY7 126 aa1.8□□□□□ -2.12
LRRC39-201ENST00000342895 RPL39LQ96EH5 51 aaKnown RBP1.8□□□□□ -2.12
LRRC39-201ENST00000342895 ASCC3Q8N3C0 2202 aaKnown RBP1.79□□□□□ -2.12
LRRC39-201ENST00000342895 ASXL3Q9C0F0 2248 aa1.79□□□□□ -2.12
LRRC39-201ENST00000342895 IGKV2D-24A0A075B6R9 120 aa1.79□□□□□ -2.12
LRRC39-201ENST00000342895 IGLV6-57P01721 117 aa1.79□□□□□ -2.12
LRRC39-201ENST00000342895 TPRXLQ17RH7 258 aa1.79□□□□□ -2.12
LRRC39-201ENST00000342895 PRO3102Q9H379 93 aa1.79□□□□□ -2.12
LRRC39-201ENST00000342895 CDKN2A-AS1Q9UH64 79 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms