RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 BPY2O14599 106 aa8.67□□□□□ -1.02
SNRNP48-201ENST00000342415 FAM236DA0A1B0GTK5 79 aa8.66□□□□□ -1.02
SNRNP48-201ENST00000342415 FAM236CP0DP71 79 aa8.66□□□□□ -1.02
SNRNP48-201ENST00000342415 SETXQ7Z333 2677 aaKnown RBP8.66□□□□□ -1.02
SNRNP48-201ENST00000342415 CELSR1Q9NYQ6 3014 aa8.66□□□□□ -1.02
SNRNP48-201ENST00000342415 RPL37AP8A6NKH3 93 aa8.65□□□□□ -1.02
SNRNP48-201ENST00000342415 FAM19A5Q7Z5A7 132 aaPredicted RBP8.65□□□□□ -1.02
SNRNP48-201ENST00000342415 RETNQ9HD89 108 aa8.65□□□□□ -1.02
SNRNP48-201ENST00000342415 HRCT1Q6UXD1 115 aa8.65□□□□□ -1.02
SNRNP48-201ENST00000342415 CELSR2Q9HCU4 2923 aa8.65□□□□□ -1.02
SNRNP48-201ENST00000342415 ZNF73O43830 326 aaPredicted RBP8.65□□□□□ -1.02
SNRNP48-201ENST00000342415 STAB1Q9NY15 2570 aa8.64□□□□□ -1.03
SNRNP48-201ENST00000342415 KPRPQ5T749 579 aaPredicted RBP8.64□□□□□ -1.03
SNRNP48-201ENST00000342415 PRR4Q16378 134 aa8.63□□□□□ -1.03
SNRNP48-201ENST00000342415 C10orf25Q5T742 122 aa8.63□□□□□ -1.03
SNRNP48-201ENST00000342415 TMEM258P61165 79 aa8.63□□□□□ -1.03
SNRNP48-201ENST00000342415 C9orf129Q5T035 196 aaKnown RBP8.63□□□□□ -1.03
SNRNP48-201ENST00000342415 KIR2DL5BQ8NHK3 375 aa8.63□□□□□ -1.03
SNRNP48-201ENST00000342415 HIGD2AQ9BW72 106 aa8.63□□□□□ -1.03
SNRNP48-201ENST00000342415 PDE6GP18545 87 aa8.62□□□□□ -1.03
SNRNP48-201ENST00000342415 LELP1Q5T871 98 aa8.62□□□□□ -1.03
SNRNP48-201ENST00000342415 Q8N9L7 120 aa8.62□□□□□ -1.03
SNRNP48-201ENST00000342415 CELA1Q9UNI1 258 aa8.62□□□□□ -1.03
SNRNP48-201ENST00000342415 DEFB131BA0A096LNP1 70 aa8.62□□□□□ -1.03
SNRNP48-201ENST00000342415 ATP5EP2Q5VTU8 51 aa8.62□□□□□ -1.03
SNRNP48-201ENST00000342415 COL6A5A8TX70 2615 aa8.61□□□□□ -1.03
SNRNP48-201ENST00000342415 IGHV4-30-4P0DP06 118 aa8.61□□□□□ -1.03
SNRNP48-201ENST00000342415 MIFP14174 115 aa8.61□□□□□ -1.03
SNRNP48-201ENST00000342415 BRK1Q8WUW1 75 aa8.61□□□□□ -1.03
SNRNP48-201ENST00000342415 C11orf45Q8TAV5 145 aa8.61□□□□□ -1.03
SNRNP48-201ENST00000342415 SYCNQ0VAF6 134 aa8.6□□□□□ -1.03
SNRNP48-201ENST00000342415 COX17Q14061 63 aa8.6□□□□□ -1.03
SNRNP48-201ENST00000342415 SPENQ96T58 3664 aaKnown RBP8.6□□□□□ -1.03
SNRNP48-201ENST00000342415 FAM104AQ969W3 186 aa8.6□□□□□ -1.03
SNRNP48-201ENST00000342415 A0A1B0GUV1 79 aa8.59□□□□□ -1.03
SNRNP48-201ENST00000342415 LRCOL1A6NCL2 159 aa8.59□□□□□ -1.03
SNRNP48-201ENST00000342415 A0A0U1RQV1 116 aa8.58□□□□□ -1.04
SNRNP48-201ENST00000342415 WFDC10BQ8IUB3 73 aa8.58□□□□□ -1.04
SNRNP48-201ENST00000342415 LINC00575Q6W349 94 aa8.58□□□□□ -1.04
SNRNP48-201ENST00000342415 ITPR2Q14571 2701 aa8.57□□□□□ -1.04
SNRNP48-201ENST00000342415 Q6ZVQ6 151 aa8.57□□□□□ -1.04
SNRNP48-201ENST00000342415 RMI2Q96E14 147 aa8.57□□□□□ -1.04
SNRNP48-201ENST00000342415 PKIGQ9Y2B9 76 aa8.57□□□□□ -1.04
SNRNP48-201ENST00000342415 NANOS2P60321 138 aaKnown RBP8.57□□□□□ -1.04
SNRNP48-201ENST00000342415 NDUFC2O95298 119 aa8.57□□□□□ -1.04
SNRNP48-201ENST00000342415 C5orf47Q569G3 176 aa8.57□□□□□ -1.04
SNRNP48-201ENST00000342415 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.56□□□□□ -1.04
SNRNP48-201ENST00000342415 Q6ZTC4 211 aa8.56□□□□□ -1.04
SNRNP48-201ENST00000342415 M0R378 163 aa8.55□□□□□ -1.04
SNRNP48-201ENST00000342415 LINC01547P58512 204 aaPredicted RBP8.55□□□□□ -1.04
SNRNP48-201ENST00000342415 GIG44P09565 113 aaPredicted RBP8.54□□□□□ -1.04
SNRNP48-201ENST00000342415 FAM30AQ9NZY2 134 aa8.54□□□□□ -1.04
SNRNP48-201ENST00000342415 FSHBP01225 129 aa8.53□□□□□ -1.04
SNRNP48-201ENST00000342415 Q6ZRU5 148 aa8.53□□□□□ -1.04
SNRNP48-201ENST00000342415 MUC7Q8TAX7 377 aa8.53□□□□□ -1.04
SNRNP48-201ENST00000342415 X6R8D5 127 aa8.53□□□□□ -1.04
SNRNP48-201ENST00000342415 NDUFS5O43920 106 aa8.52□□□□□ -1.04
SNRNP48-201ENST00000342415 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.52□□□□□ -1.04
SNRNP48-201ENST00000342415 H3BQ85 93 aa8.52□□□□□ -1.05
SNRNP48-201ENST00000342415 WFDC13Q8IUB5 93 aa8.52□□□□□ -1.05
SNRNP48-201ENST00000342415 A0A096LNT2 108 aa8.51□□□□□ -1.05
SNRNP48-201ENST00000342415 A0A0J9YWU9 116 aa8.51□□□□□ -1.05
SNRNP48-201ENST00000342415 TRAV7A0A075B6U4 112 aa8.51□□□□□ -1.05
SNRNP48-201ENST00000342415 CDK2AP2O75956 126 aa8.51□□□□□ -1.05
SNRNP48-201ENST00000342415 DEFB116Q30KQ4 102 aa8.51□□□□□ -1.05
SNRNP48-201ENST00000342415 LYPD5Q6UWN5 251 aa8.51□□□□□ -1.05
SNRNP48-201ENST00000342415 FAM19A3Q7Z5A8 133 aa8.51□□□□□ -1.05
SNRNP48-201ENST00000342415 LINC01561Q8N1V8 128 aa8.51□□□□□ -1.05
SNRNP48-201ENST00000342415 CRYGAP11844 174 aa8.51□□□□□ -1.05
SNRNP48-201ENST00000342415 MXRA5Q9NR99 2828 aa8.5□□□□□ -1.05
SNRNP48-201ENST00000342415 PLAC8L1A1L4L8 177 aa8.5□□□□□ -1.05
SNRNP48-201ENST00000342415 SPATA3Q8NHX4 192 aa8.49□□□□□ -1.05
SNRNP48-201ENST00000342415 C6orf48Q9UBA6 75 aa8.49□□□□□ -1.05
SNRNP48-201ENST00000342415 C4orf26Q17RF5 130 aa8.49□□□□□ -1.05
SNRNP48-201ENST00000342415 H0Y9J4 135 aa8.48□□□□□ -1.05
SNRNP48-201ENST00000342415 TRAV10A0A0B4J240 114 aa8.48□□□□□ -1.05
SNRNP48-201ENST00000342415 CSNK1G2-AS1Q8NCQ2 148 aa8.48□□□□□ -1.05
SNRNP48-201ENST00000342415 MP68P56378 58 aa8.47□□□□□ -1.05
SNRNP48-201ENST00000342415 EGFEM1PQ0D2K5 195 aa8.47□□□□□ -1.05
SNRNP48-201ENST00000342415 C16orf95Q9H693 158 aa8.47□□□□□ -1.05
SNRNP48-201ENST00000342415 UBE2AP49459 152 aa8.47□□□□□ -1.05
SNRNP48-201ENST00000342415 HIVEP1P15822 2718 aa8.47□□□□□ -1.05
SNRNP48-201ENST00000342415 BAHCC1Q9P281 2608 aa8.47□□□□□ -1.05
SNRNP48-201ENST00000342415 NSD1Q96L73 2696 aaPredicted RBP8.47□□□□□ -1.05
SNRNP48-201ENST00000342415 SVIPQ8NHG7 77 aa8.47□□□□□ -1.05
SNRNP48-201ENST00000342415 NDUFC2-KCTD14E9PQ53 114 aa8.46□□□□□ -1.06
SNRNP48-201ENST00000342415 C1orf137Q5JT78 98 aa8.44□□□□□ -1.06
SNRNP48-201ENST00000342415 C19orf73Q9NVV2 129 aa8.44□□□□□ -1.06
SNRNP48-201ENST00000342415 Q6ZQT0 140 aa8.44□□□□□ -1.06
SNRNP48-201ENST00000342415 CR1P17927 2039 aa8.44□□□□□ -1.06
SNRNP48-201ENST00000342415 TM2D3Q9BRN9 247 aa8.43□□□□□ -1.06
SNRNP48-201ENST00000342415 IL17DQ8TAD2 202 aa8.43□□□□□ -1.06
SNRNP48-201ENST00000342415 TMEM254Q8TBM7 123 aa8.43□□□□□ -1.06
SNRNP48-201ENST00000342415 APCP25054 2843 aa8.42□□□□□ -1.06
SNRNP48-201ENST00000342415 M0R2N4 97 aa8.42□□□□□ -1.06
SNRNP48-201ENST00000342415 KIAA0087Q14695 138 aa8.42□□□□□ -1.06
SNRNP48-201ENST00000342415 ESRGQ1W209 222 aa8.4□□□□□ -1.06
SNRNP48-201ENST00000342415 SERP1Q9Y6X1 66 aa8.4□□□□□ -1.07
SNRNP48-201ENST00000342415 SMIM26A0A096LP01 95 aa8.39□□□□□ -1.07
SNRNP48-201ENST00000342415 DHRS4-AS1Q9P1J3 65 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms