RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 TRGC2P03986 189 aa10□□□□□ -0.81
BRCC3-202ENST00000340647 TMEM126AQ9H061 195 aa10□□□□□ -0.81
BRCC3-202ENST00000340647 MUC2Q02817 5179 aa9.99□□□□□ -0.81
BRCC3-202ENST00000340647 PRLHP81277 87 aa9.99□□□□□ -0.81
BRCC3-202ENST00000340647 SLC7A5P1Q8MH63 180 aa9.98□□□□□ -0.81
BRCC3-202ENST00000340647 A0A0U1RRA0 63 aa9.97□□□□□ -0.81
BRCC3-202ENST00000340647 CRYGAP11844 174 aa9.96□□□□□ -0.82
BRCC3-202ENST00000340647 UBE2AP49459 152 aa9.96□□□□□ -0.82
BRCC3-202ENST00000340647 SFTA2Q6UW10 78 aa9.96□□□□□ -0.82
BRCC3-202ENST00000340647 HSBP1O75506 76 aa9.95□□□□□ -0.82
BRCC3-202ENST00000340647 TSPAN13O95857 204 aa9.95□□□□□ -0.82
BRCC3-202ENST00000340647 SMIM13P0DJ93 91 aa9.95□□□□□ -0.82
BRCC3-202ENST00000340647 LINC00158P58513 81 aa9.95□□□□□ -0.82
BRCC3-202ENST00000340647 TSPEAR-AS2P59090 65 aa9.95□□□□□ -0.82
BRCC3-202ENST00000340647 RPL24P83731 157 aaKnown RBP9.95□□□□□ -0.82
BRCC3-202ENST00000340647 COLCA2A8K830 154 aa9.94□□□□□ -0.82
BRCC3-202ENST00000340647 SERF1AO75920 110 aa9.94□□□□□ -0.82
BRCC3-202ENST00000340647 FAM19A1Q7Z5A9 133 aa9.94□□□□□ -0.82
BRCC3-202ENST00000340647 TYMSOSQ8TAI1 123 aa9.94□□□□□ -0.82
BRCC3-202ENST00000340647 PLEKHB2Q96CS7 222 aa9.93□□□□□ -0.82
BRCC3-202ENST00000340647 PRR4Q16378 134 aa9.92□□□□□ -0.82
BRCC3-202ENST00000340647 FAM229BQ4G0N7 80 aa9.92□□□□□ -0.82
BRCC3-202ENST00000340647 MIR7-3HGQ8N6C7 128 aa9.91□□□□□ -0.82
BRCC3-202ENST00000340647 NDUFA12Q9UI09 145 aa9.9□□□□□ -0.82
BRCC3-202ENST00000340647 KRTAP4-16G5E9R7 235 aaPredicted RBP9.89□□□□□ -0.83
BRCC3-202ENST00000340647 H0Y8G0 127 aa9.89□□□□□ -0.83
BRCC3-202ENST00000340647 LEPROTL1O95214 131 aa9.89□□□□□ -0.83
BRCC3-202ENST00000340647 SPRR1AP35321 89 aa9.88□□□□□ -0.83
BRCC3-202ENST00000340647 HERV-K104P63124 156 aa9.87□□□□□ -0.83
BRCC3-202ENST00000340647 BOD1L2Q8IYS8 172 aa9.87□□□□□ -0.83
BRCC3-202ENST00000340647 C3orf22Q8N5N4 141 aa9.87□□□□□ -0.83
BRCC3-202ENST00000340647 PMCHL2Q9BQD1 86 aa9.87□□□□□ -0.83
BRCC3-202ENST00000340647 NCR3O14931 201 aa9.86□□□□□ -0.83
BRCC3-202ENST00000340647 LEPROTO15243 131 aa9.86□□□□□ -0.83
BRCC3-202ENST00000340647 MEIG1Q5JSS6 88 aa9.86□□□□□ -0.83
BRCC3-202ENST00000340647 KRTAP9-2Q9BYQ4 174 aa9.86□□□□□ -0.83
BRCC3-202ENST00000340647 LOC107984156A0A0G2JMH3 177 aa9.85□□□□□ -0.83
BRCC3-202ENST00000340647 FABP4P15090 132 aa9.85□□□□□ -0.83
BRCC3-202ENST00000340647 ARL17AQ8IVW1 177 aa9.85□□□□□ -0.83
BRCC3-202ENST00000340647 DAND5Q8N907 189 aa9.85□□□□□ -0.83
BRCC3-202ENST00000340647 KCNQ1DNQ9H478 68 aa9.85□□□□□ -0.83
BRCC3-202ENST00000340647 LINC00304Q8N9R0 145 aa9.84□□□□□ -0.83
BRCC3-202ENST00000340647 SPRR4Q96PI1 79 aa9.84□□□□□ -0.83
BRCC3-202ENST00000340647 HIGD2AQ9BW72 106 aa9.84□□□□□ -0.83
BRCC3-202ENST00000340647 TRBV10-3A0A0K0K1G6 114 aa9.83□□□□□ -0.84
BRCC3-202ENST00000340647 MYMXA0A1B0GTQ4 84 aa9.83□□□□□ -0.84
BRCC3-202ENST00000340647 PRYO14603 147 aa9.83□□□□□ -0.84
BRCC3-202ENST00000340647 EIF4EBP3O60516 100 aaPredicted RBP9.83□□□□□ -0.84
BRCC3-202ENST00000340647 RETNLBQ9BQ08 111 aa9.83□□□□□ -0.84
BRCC3-202ENST00000340647 IGKV2D-26A0A0A0MRZ7 120 aa9.82□□□□□ -0.84
BRCC3-202ENST00000340647 J3QQQ9 107 aa9.82□□□□□ -0.84
BRCC3-202ENST00000340647 LINC00337Q8N6G1 96 aa9.82□□□□□ -0.84
BRCC3-202ENST00000340647 KRTAP3-3Q9BYR6 98 aa9.82□□□□□ -0.84
BRCC3-202ENST00000340647 KRTAP3-2Q9BYR7 98 aa9.82□□□□□ -0.84
BRCC3-202ENST00000340647 MUC17Q685J3 4493 aa9.81□□□□□ -0.84
BRCC3-202ENST00000340647 DPM2O94777 84 aa9.81□□□□□ -0.84
BRCC3-202ENST00000340647 PLNP26678 52 aa9.81□□□□□ -0.84
BRCC3-202ENST00000340647 SMCR5Q8TEV8 140 aa9.81□□□□□ -0.84
BRCC3-202ENST00000340647 HSPB8Q9UJY1 196 aa9.81□□□□□ -0.84
BRCC3-202ENST00000340647 SOSTDC1Q6X4U4 206 aa9.8□□□□□ -0.84
BRCC3-202ENST00000340647 ATP6V1G1O75348 118 aa9.79□□□□□ -0.84
BRCC3-202ENST00000340647 IGKCP01834 107 aa9.79□□□□□ -0.84
BRCC3-202ENST00000340647 LINC00587B1AMM8 73 aa9.78□□□□□ -0.84
BRCC3-202ENST00000340647 ADAMTSL4-AS1Q5T5F5 129 aa9.78□□□□□ -0.84
BRCC3-202ENST00000340647 FAT4Q6V0I7 4981 aa9.78□□□□□ -0.84
BRCC3-202ENST00000340647 HIST1H2BKO60814 126 aa9.77□□□□□ -0.85
BRCC3-202ENST00000340647 ERC2-IT1O76042 136 aa9.77□□□□□ -0.85
BRCC3-202ENST00000340647 HIST1H2BJP06899 126 aa9.77□□□□□ -0.85
BRCC3-202ENST00000340647 HIST1H2BOP23527 126 aa9.77□□□□□ -0.85
BRCC3-202ENST00000340647 HIST1H2BBP33778 126 aa9.77□□□□□ -0.85
BRCC3-202ENST00000340647 HIST1H2BDP58876 126 aa9.77□□□□□ -0.85
BRCC3-202ENST00000340647 HIST1H2BCP62807 126 aa9.77□□□□□ -0.85
BRCC3-202ENST00000340647 HIST2H2BEQ16778 126 aa9.77□□□□□ -0.85
BRCC3-202ENST00000340647 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.77□□□□□ -0.85
BRCC3-202ENST00000340647 HIST1H2BHQ93079 126 aa9.77□□□□□ -0.85
BRCC3-202ENST00000340647 HIST1H2BNQ99877 126 aa9.77□□□□□ -0.85
BRCC3-202ENST00000340647 HIST1H2BMQ99879 126 aa9.77□□□□□ -0.85
BRCC3-202ENST00000340647 B5MCH6 92 aa9.76□□□□□ -0.85
BRCC3-202ENST00000340647 MAP1LC3CQ9BXW4 147 aa9.76□□□□□ -0.85
BRCC3-202ENST00000340647 TRBV10-2A0A0K0K1G8 114 aa9.75□□□□□ -0.85
BRCC3-202ENST00000340647 Q9BRP9 147 aa9.75□□□□□ -0.85
BRCC3-202ENST00000340647 A0A0J9YXY3 114 aa9.74□□□□□ -0.85
BRCC3-202ENST00000340647 E9PLD3 99 aa9.74□□□□□ -0.85
BRCC3-202ENST00000340647 NMUP48645 174 aa9.74□□□□□ -0.85
BRCC3-202ENST00000340647 LINC00483Q53H64 154 aa9.74□□□□□ -0.85
BRCC3-202ENST00000340647 SYS1-DBNDD2H3BUS1 97 aa9.73□□□□□ -0.85
BRCC3-202ENST00000340647 IGLV6-57P01721 117 aa9.73□□□□□ -0.85
BRCC3-202ENST00000340647 CTAG1AP78358 180 aa9.73□□□□□ -0.85
BRCC3-202ENST00000340647 PPDPFQ9H3Y8 114 aa9.73□□□□□ -0.85
BRCC3-202ENST00000340647 ETDCA0A1B0GVM5 59 aa9.72□□□□□ -0.85
BRCC3-202ENST00000340647 LGALS3P17931 250 aaKnown RBP9.72□□□□□ -0.85
BRCC3-202ENST00000340647 DDTP30046 118 aa9.72□□□□□ -0.85
BRCC3-202ENST00000340647 HERVK_113P61574 105 aa9.72□□□□□ -0.85
BRCC3-202ENST00000340647 LCE2AQ5TA79 106 aaPredicted RBP9.72□□□□□ -0.85
BRCC3-202ENST00000340647 LITAFQ99732 161 aa9.72□□□□□ -0.85
BRCC3-202ENST00000340647 NDUFC2O95298 119 aa9.71□□□□□ -0.86
BRCC3-202ENST00000340647 NPC2P61916 151 aa9.7□□□□□ -0.86
BRCC3-202ENST00000340647 TPRXLQ17RH7 258 aa9.7□□□□□ -0.86
BRCC3-202ENST00000340647 LINC01545Q5VT33 79 aa9.7□□□□□ -0.86
BRCC3-202ENST00000340647 SPANXB1Q9NS25 103 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 165.8 ms