RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 FAM19A3Q7Z5A8 133 aa8.68□□□□□ -1.02
LIN54-201ENST00000340417 SCXQ7RTU7 201 aa8.67□□□□□ -1.02
LIN54-201ENST00000340417 TEN1Q86WV5 123 aa8.67□□□□□ -1.02
LIN54-201ENST00000340417 GVQW2A0A096LPI5 108 aaPredicted RBP8.67□□□□□ -1.02
LIN54-201ENST00000340417 CRYGAP11844 174 aa8.67□□□□□ -1.02
LIN54-201ENST00000340417 MUC4Q99102 2169 aa8.67□□□□□ -1.02
LIN54-201ENST00000340417 TYMSOSQ8TAI1 123 aa8.67□□□□□ -1.02
LIN54-201ENST00000340417 TSPEAR-AS2P59090 65 aa8.66□□□□□ -1.02
LIN54-201ENST00000340417 URB1-AS1Q96HZ7 61 aa8.66□□□□□ -1.02
LIN54-201ENST00000340417 Q8N814 137 aa8.65□□□□□ -1.02
LIN54-201ENST00000340417 FAM236DA0A1B0GTK5 79 aa8.65□□□□□ -1.02
LIN54-201ENST00000340417 FAM236CP0DP71 79 aa8.65□□□□□ -1.02
LIN54-201ENST00000340417 SETXQ7Z333 2677 aaKnown RBP8.65□□□□□ -1.03
LIN54-201ENST00000340417 SPACA4Q8TDM5 124 aa8.64□□□□□ -1.03
LIN54-201ENST00000340417 TNRC18O15417 2968 aaPredicted RBP8.63□□□□□ -1.03
LIN54-201ENST00000340417 WFDC2Q14508 124 aa8.63□□□□□ -1.03
LIN54-201ENST00000340417 DSPP15924 2871 aaKnown RBP8.62□□□□□ -1.03
LIN54-201ENST00000340417 A0A087WYN8 130 aa8.62□□□□□ -1.03
LIN54-201ENST00000340417 TAX1BP3O14907 124 aa8.62□□□□□ -1.03
LIN54-201ENST00000340417 ADAMTSL4-AS1Q5T5F5 129 aa8.62□□□□□ -1.03
LIN54-201ENST00000340417 WIPF1O43516 503 aa8.62□□□□□ -1.03
LIN54-201ENST00000340417 MOBPQ13875 183 aa8.62□□□□□ -1.03
LIN54-201ENST00000340417 CDH23Q9H251 3354 aa8.61□□□□□ -1.03
LIN54-201ENST00000340417 PCP4P48539 62 aa8.61□□□□□ -1.03
LIN54-201ENST00000340417 LINC00612Q8N6U2 182 aa8.61□□□□□ -1.03
LIN54-201ENST00000340417 WFDC13Q8IUB5 93 aa8.61□□□□□ -1.03
LIN54-201ENST00000340417 PRR4Q16378 134 aa8.6□□□□□ -1.03
LIN54-201ENST00000340417 IGHV6-1A0A0B4J1U7 121 aa8.59□□□□□ -1.03
LIN54-201ENST00000340417 IGLV5-39A0A0G2JS06 123 aa8.59□□□□□ -1.03
LIN54-201ENST00000340417 EPM2AB3EWF7 344 aa8.59□□□□□ -1.03
LIN54-201ENST00000340417 A0A096LNJ9 63 aa8.58□□□□□ -1.04
LIN54-201ENST00000340417 UNC79Q9P2D8 2635 aa8.58□□□□□ -1.04
LIN54-201ENST00000340417 BCE1O60756 84 aa8.57□□□□□ -1.04
LIN54-201ENST00000340417 SEC61GP60059 68 aa8.57□□□□□ -1.04
LIN54-201ENST00000340417 WDFY4Q6ZS81 3184 aa8.57□□□□□ -1.04
LIN54-201ENST00000340417 BPTFQ12830 3046 aa8.56□□□□□ -1.04
LIN54-201ENST00000340417 UNC80Q8N2C7 3258 aa8.55□□□□□ -1.04
LIN54-201ENST00000340417 A0A087WSZ3 146 aa8.55□□□□□ -1.04
LIN54-201ENST00000340417 TNP2Q05952 138 aa8.55□□□□□ -1.04
LIN54-201ENST00000340417 ZNF575Q86XF7 245 aa8.55□□□□□ -1.04
LIN54-201ENST00000340417 CHD6Q8TD26 2715 aa8.54□□□□□ -1.04
LIN54-201ENST00000340417 SZT2Q5T011 3432 aa8.54□□□□□ -1.04
LIN54-201ENST00000340417 RETNLBQ9BQ08 111 aa8.53□□□□□ -1.04
LIN54-201ENST00000340417 LINC00310P59036 64 aa8.53□□□□□ -1.04
LIN54-201ENST00000340417 LINC00528Q8N1L1 170 aa8.53□□□□□ -1.04
LIN54-201ENST00000340417 C2orf91Q6ZV80 131 aa8.52□□□□□ -1.04
LIN54-201ENST00000340417 LINC00575Q6W349 94 aa8.52□□□□□ -1.05
LIN54-201ENST00000340417 SMIM20Q8N5G0 67 aa8.52□□□□□ -1.05
LIN54-201ENST00000340417 IGLV5-45A0A087WSX0 123 aa8.52□□□□□ -1.05
LIN54-201ENST00000340417 FAM168BA1KXE4 195 aa8.52□□□□□ -1.05
LIN54-201ENST00000340417 KRTAP21-3Q3LHN1 58 aa8.51□□□□□ -1.05
LIN54-201ENST00000340417 C9orf163Q8N9P6 203 aa8.51□□□□□ -1.05
LIN54-201ENST00000340417 LINC01546A6NGU7 62 aa8.51□□□□□ -1.05
LIN54-201ENST00000340417 PRR34Q9NV39 138 aa8.51□□□□□ -1.05
LIN54-201ENST00000340417 LINC00643Q86TS7 51 aa8.5□□□□□ -1.05
LIN54-201ENST00000340417 Q8NBF4 154 aa8.5□□□□□ -1.05
LIN54-201ENST00000340417 GCN1Q92616 2671 aaKnown RBP8.5□□□□□ -1.05
LIN54-201ENST00000340417 Q6Q795 121 aa8.5□□□□□ -1.05
LIN54-201ENST00000340417 XIRP2A4UGR9 3374 aa8.5□□□□□ -1.05
LIN54-201ENST00000340417 ATOX1O00244 68 aa8.49□□□□□ -1.05
LIN54-201ENST00000340417 ATP5EP2Q5VTU8 51 aa8.49□□□□□ -1.05
LIN54-201ENST00000340417 SDIM1Q6ZPB5 146 aa8.48□□□□□ -1.05
LIN54-201ENST00000340417 LAMA2P24043 3122 aaKnown RBP8.48□□□□□ -1.05
LIN54-201ENST00000340417 LCE6AA0A183 80 aa8.48□□□□□ -1.05
LIN54-201ENST00000340417 Q6ZVQ6 151 aa8.48□□□□□ -1.05
LIN54-201ENST00000340417 C15orf56Q8N910 161 aa8.48□□□□□ -1.05
LIN54-201ENST00000340417 J3KT08 172 aa8.48□□□□□ -1.05
LIN54-201ENST00000340417 KIAA0087Q14695 138 aa8.48□□□□□ -1.05
LIN54-201ENST00000340417 FAM236AA0A1B0GUQ0 79 aa8.48□□□□□ -1.05
LIN54-201ENST00000340417 FAM236BA0A1B0GV22 79 aa8.48□□□□□ -1.05
LIN54-201ENST00000340417 COL6A5A8TX70 2615 aa8.47□□□□□ -1.05
LIN54-201ENST00000340417 DEFB116Q30KQ4 102 aa8.46□□□□□ -1.05
LIN54-201ENST00000340417 Q6ZRX8 168 aa8.46□□□□□ -1.05
LIN54-201ENST00000340417 COL6A3P12111 3177 aa8.45□□□□□ -1.06
LIN54-201ENST00000340417 FAM30AQ9NZY2 134 aa8.45□□□□□ -1.06
LIN54-201ENST00000340417 TEX15Q9BXT5 2789 aa8.45□□□□□ -1.06
LIN54-201ENST00000340417 SERTAD4-AS1Q5TG53 156 aa8.44□□□□□ -1.06
LIN54-201ENST00000340417 TRIOO75962 3097 aa8.44□□□□□ -1.06
LIN54-201ENST00000340417 CDIP1Q9H305 208 aa8.43□□□□□ -1.06
LIN54-201ENST00000340417 LINC00304Q8N9R0 145 aa8.43□□□□□ -1.06
LIN54-201ENST00000340417 STAB1Q9NY15 2570 aa8.42□□□□□ -1.06
LIN54-201ENST00000340417 ZNF861PO60384 105 aa8.42□□□□□ -1.06
LIN54-201ENST00000340417 TRBV7-6A0A0J9YX20 115 aa8.41□□□□□ -1.06
LIN54-201ENST00000340417 ELOF1P60002 83 aaKnown RBP8.41□□□□□ -1.06
LIN54-201ENST00000340417 CFAP54Q96N23 3096 aa8.4□□□□□ -1.06
LIN54-201ENST00000340417 VPREB1P12018 145 aa8.4□□□□□ -1.06
LIN54-201ENST00000340417 CNBPP62633 177 aaKnown RBP8.4□□□□□ -1.06
LIN54-201ENST00000340417 B5MCH6 92 aa8.4□□□□□ -1.07
LIN54-201ENST00000340417 ST20-AS1Q8NBB2 130 aa8.39□□□□□ -1.07
LIN54-201ENST00000340417 C3orf22Q8N5N4 141 aa8.39□□□□□ -1.07
LIN54-201ENST00000340417 IGLV7-43P04211 117 aa8.38□□□□□ -1.07
LIN54-201ENST00000340417 IGLV1-50A0A075B6I6 118 aa8.38□□□□□ -1.07
LIN54-201ENST00000340417 SPAG11AQ6PDA7 123 aa8.38□□□□□ -1.07
LIN54-201ENST00000340417 C5orf47Q569G3 176 aa8.37□□□□□ -1.07
LIN54-201ENST00000340417 ATP11AUNQ6ZP68 121 aa8.37□□□□□ -1.07
LIN54-201ENST00000340417 LINC01547P58512 204 aaPredicted RBP8.36□□□□□ -1.07
LIN54-201ENST00000340417 Q8N9L7 120 aa8.36□□□□□ -1.07
LIN54-201ENST00000340417 COX6B2Q6YFQ2 88 aa8.36□□□□□ -1.07
LIN54-201ENST00000340417 PSORS1C2Q9UIG4 136 aa8.36□□□□□ -1.07
LIN54-201ENST00000340417 TMEM258P61165 79 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms