RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 KMT2AQ03164 3969 aa4.91□□□□□ -1.62
SRFBP1-201ENST00000339397 SCGB1A1P11684 91 aa4.91□□□□□ -1.62
SRFBP1-201ENST00000339397 LINC01620Q4KN68 170 aa4.91□□□□□ -1.62
SRFBP1-201ENST00000339397 OR13C6PQ8NH95 151 aa4.91□□□□□ -1.62
SRFBP1-201ENST00000339397 SMIM11BQ8TCY0 68 aa4.91□□□□□ -1.62
SRFBP1-201ENST00000339397 SLC25A20O43772 301 aa4.9□□□□□ -1.62
SRFBP1-201ENST00000339397 DNAH10OSP0CZ25 163 aa4.9□□□□□ -1.62
SRFBP1-201ENST00000339397 NTN5Q8WTR8 489 aaPredicted RBP4.9□□□□□ -1.62
SRFBP1-201ENST00000339397 DYNC2H1Q8NCM8 4307 aaKnown RBP4.9□□□□□ -1.62
SRFBP1-201ENST00000339397 LECT2O14960 151 aa4.9□□□□□ -1.62
SRFBP1-201ENST00000339397 LYRM7Q5U5X0 104 aa4.9□□□□□ -1.62
SRFBP1-201ENST00000339397 CARD19Q96LW7 228 aa4.9□□□□□ -1.62
SRFBP1-201ENST00000339397 ATXN8Q156A1 80 aa4.9□□□□□ -1.63
SRFBP1-201ENST00000339397 Q6ZRU5 148 aa4.9□□□□□ -1.63
SRFBP1-201ENST00000339397 KRTAP1-5Q9BYS1 174 aa4.9□□□□□ -1.63
SRFBP1-201ENST00000339397 LST1O00453 97 aa4.89□□□□□ -1.63
SRFBP1-201ENST00000339397 NCR3O14931 201 aa4.89□□□□□ -1.63
SRFBP1-201ENST00000339397 COX6CP09669 75 aa4.89□□□□□ -1.63
SRFBP1-201ENST00000339397 ANKRD29Q8N6D5 301 aa4.89□□□□□ -1.63
SRFBP1-201ENST00000339397 C15orf53Q8NAA6 179 aa4.89□□□□□ -1.63
SRFBP1-201ENST00000339397 COPS9Q8WXC6 57 aa4.89□□□□□ -1.63
SRFBP1-201ENST00000339397 TRAV13-2A0A0B4J235 113 aa4.89□□□□□ -1.63
SRFBP1-201ENST00000339397 SLPIP03973 132 aa4.89□□□□□ -1.63
SRFBP1-201ENST00000339397 CXCL5P42830 114 aa4.89□□□□□ -1.63
SRFBP1-201ENST00000339397 B9D2Q9BPU9 175 aa4.89□□□□□ -1.63
SRFBP1-201ENST00000339397 H3BS24 57 aa4.88□□□□□ -1.63
SRFBP1-201ENST00000339397 CAMK2N2Q96S95 79 aa4.88□□□□□ -1.63
SRFBP1-201ENST00000339397 TEX49A0A1B0GTD5 131 aa4.88□□□□□ -1.63
SRFBP1-201ENST00000339397 COX17Q14061 63 aa4.88□□□□□ -1.63
SRFBP1-201ENST00000339397 A0A087WYN8 130 aa4.87□□□□□ -1.63
SRFBP1-201ENST00000339397 FAM229AH3BQW9 127 aa4.87□□□□□ -1.63
SRFBP1-201ENST00000339397 RPL28P46779 137 aaKnown RBP4.87□□□□□ -1.63
SRFBP1-201ENST00000339397 GAGE2EQ4V326 116 aa4.87□□□□□ -1.63
SRFBP1-201ENST00000339397 TEN1Q86WV5 123 aa4.87□□□□□ -1.63
SRFBP1-201ENST00000339397 GAGE2DQ9UEU5 116 aa4.87□□□□□ -1.63
SRFBP1-201ENST00000339397 PPDPFQ9H3Y8 114 aa4.86□□□□□ -1.63
SRFBP1-201ENST00000339397 TRBV10-2A0A0K0K1G8 114 aa4.86□□□□□ -1.63
SRFBP1-201ENST00000339397 RPL18AQ02543 176 aaKnown RBP4.86□□□□□ -1.63
SRFBP1-201ENST00000339397 Q6ZRP5 223 aa4.86□□□□□ -1.63
SRFBP1-201ENST00000339397 APLNQ9ULZ1 77 aa4.86□□□□□ -1.63
SRFBP1-201ENST00000339397 C22orf24Q9Y442 160 aa4.85□□□□□ -1.63
SRFBP1-201ENST00000339397 GVQW2A0A096LPI5 108 aaPredicted RBP4.85□□□□□ -1.63
SRFBP1-201ENST00000339397 USP17L23D6RBM5 183 aa4.85□□□□□ -1.63
SRFBP1-201ENST00000339397 C9orf129Q5T035 196 aaKnown RBP4.84□□□□□ -1.63
SRFBP1-201ENST00000339397 A0A1B0GV72 72 aa4.84□□□□□ -1.63
SRFBP1-201ENST00000339397 NDUFC2O95298 119 aa4.84□□□□□ -1.63
SRFBP1-201ENST00000339397 SYCNQ0VAF6 134 aa4.83□□□□□ -1.64
SRFBP1-201ENST00000339397 UPK3BQ9BT76 320 aa4.83□□□□□ -1.64
SRFBP1-201ENST00000339397 C6orf99Q4VX62 202 aa4.83□□□□□ -1.64
SRFBP1-201ENST00000339397 S100A7L2Q5SY68 101 aa4.83□□□□□ -1.64
SRFBP1-201ENST00000339397 PPDPFLQ8WWR9 84 aa4.83□□□□□ -1.64
SRFBP1-201ENST00000339397 TRBV10-3A0A0K0K1G6 114 aa4.83□□□□□ -1.64
SRFBP1-201ENST00000339397 NDUFC2-KCTD14E9PQ53 114 aa4.83□□□□□ -1.64
SRFBP1-201ENST00000339397 BAALC-AS2P0C853 105 aa4.83□□□□□ -1.64
SRFBP1-201ENST00000339397 TMEM126AQ9H061 195 aa4.83□□□□□ -1.64
SRFBP1-201ENST00000339397 VPS13DQ5THJ4 4388 aa4.82□□□□□ -1.64
SRFBP1-201ENST00000339397 SRRM2Q9UQ35 2752 aaKnown RBP4.82□□□□□ -1.64
SRFBP1-201ENST00000339397 FAM168BA1KXE4 195 aa4.82□□□□□ -1.64
SRFBP1-201ENST00000339397 F8WDY8 70 aa4.82□□□□□ -1.64
SRFBP1-201ENST00000339397 UBE2DNLQ8IWF7 75 aa4.82□□□□□ -1.64
SRFBP1-201ENST00000339397 C2orf48Q96LS8 159 aa4.82□□□□□ -1.64
SRFBP1-201ENST00000339397 VPREB1P12018 145 aa4.81□□□□□ -1.64
SRFBP1-201ENST00000339397 DNAH2Q9P225 4427 aa4.81□□□□□ -1.64
SRFBP1-201ENST00000339397 IGLV6-57P01721 117 aa4.81□□□□□ -1.64
SRFBP1-201ENST00000339397 TRACP01848 142 aa4.81□□□□□ -1.64
SRFBP1-201ENST00000339397 SERTAD4-AS1Q5TG53 156 aa4.81□□□□□ -1.64
SRFBP1-201ENST00000339397 H3BT86 120 aa4.8□□□□□ -1.64
SRFBP1-201ENST00000339397 M0R2N4 97 aa4.8□□□□□ -1.64
SRFBP1-201ENST00000339397 M0QXV9 152 aa4.8□□□□□ -1.64
SRFBP1-201ENST00000339397 LINC01600Q96MT4 127 aa4.8□□□□□ -1.64
SRFBP1-201ENST00000339397 H0YGX0 51 aa4.79□□□□□ -1.64
SRFBP1-201ENST00000339397 KRTAP7-1Q8IUC3 87 aa4.79□□□□□ -1.64
SRFBP1-201ENST00000339397 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.79□□□□□ -1.64
SRFBP1-201ENST00000339397 GAGE2BQ13066 116 aa4.79□□□□□ -1.64
SRFBP1-201ENST00000339397 DNAL4O96015 105 aa4.79□□□□□ -1.64
SRFBP1-201ENST00000339397 NHLRC4P0CG21 123 aaPredicted RBP4.79□□□□□ -1.64
SRFBP1-201ENST00000339397 Q8N814 137 aa4.79□□□□□ -1.64
SRFBP1-201ENST00000339397 FUSP35637 526 aaKnown RBP eCLIP4.78□□□□□ -1.64
SRFBP1-201ENST00000339397 HECTD4Q9Y4D8 3996 aa4.78□□□□□ -1.64
SRFBP1-201ENST00000339397 RPL37AP8A6NKH3 93 aa4.78□□□□□ -1.64
SRFBP1-201ENST00000339397 MT-ATP8P03928 68 aa4.78□□□□□ -1.64
SRFBP1-201ENST00000339397 PSCAO43653 123 aa4.77□□□□□ -1.65
SRFBP1-201ENST00000339397 XGP55808 180 aa4.77□□□□□ -1.65
SRFBP1-201ENST00000339397 MUC7Q8TAX7 377 aa4.77□□□□□ -1.65
SRFBP1-201ENST00000339397 TRAV23DV6A0A075B6W5 121 aa4.77□□□□□ -1.65
SRFBP1-201ENST00000339397 LINC00575Q6W349 94 aa4.77□□□□□ -1.65
SRFBP1-201ENST00000339397 ZNF73O43830 326 aaPredicted RBP4.76□□□□□ -1.65
SRFBP1-201ENST00000339397 RMI2Q96E14 147 aa4.76□□□□□ -1.65
SRFBP1-201ENST00000339397 NUPR2A6NF83 97 aa4.76□□□□□ -1.65
SRFBP1-201ENST00000339397 C14orf132Q9NPU4 83 aa4.76□□□□□ -1.65
SRFBP1-201ENST00000339397 IGKV2-24A0A0C4DH68 120 aa4.75□□□□□ -1.65
SRFBP1-201ENST00000339397 NBDYA0A0U1RRE5 68 aa4.75□□□□□ -1.65
SRFBP1-201ENST00000339397 M0R378 163 aa4.75□□□□□ -1.65
SRFBP1-201ENST00000339397 C7orf33Q8WU49 177 aa4.75□□□□□ -1.65
SRFBP1-201ENST00000339397 FAM19A5Q7Z5A7 132 aaPredicted RBP4.75□□□□□ -1.65
SRFBP1-201ENST00000339397 A0A0A0MQY5 61 aa4.75□□□□□ -1.65
SRFBP1-201ENST00000339397 A0A096LNI7 61 aa4.74□□□□□ -1.65
SRFBP1-201ENST00000339397 hADV29S1A0JD25 119 aa4.74□□□□□ -1.65
SRFBP1-201ENST00000339397 TLX1NBP0CAT3 122 aa4.74□□□□□ -1.65
SRFBP1-201ENST00000339397 CHTF8P0CG12 524 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms