RNA–Protein interactions for RNA: ENST00000337604.6

MUC1-201, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MUC1, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-201ENST00000337604 COMMD7Q86VX2 200 aa9.18□□□□□ -0.94
MUC1-201ENST00000337604 KRTAP9-2Q9BYQ4 174 aa9.18□□□□□ -0.94
MUC1-201ENST00000337604 LINC00614P0C842 121 aa9.17□□□□□ -0.94
MUC1-201ENST00000337604 RHEBQ15382 184 aa9.17□□□□□ -0.94
MUC1-201ENST00000337604 RPS10P5Q9NQ39 176 aa9.17□□□□□ -0.94
MUC1-201ENST00000337604 IGLV7-46A0A075B6I9 117 aa9.16□□□□□ -0.94
MUC1-201ENST00000337604 TMEM170BQ5T4T1 132 aa9.16□□□□□ -0.94
MUC1-201ENST00000337604 BAGE3Q86Y29 109 aa9.16□□□□□ -0.94
MUC1-201ENST00000337604 CBLN2Q8IUK8 224 aa9.16□□□□□ -0.94
MUC1-201ENST00000337604 HIGD2AQ9BW72 106 aa9.15□□□□□ -0.94
MUC1-201ENST00000337604 TRAPPC1Q9Y5R8 145 aa9.15□□□□□ -0.94
MUC1-201ENST00000337604 CTAG1AP78358 180 aa9.14□□□□□ -0.95
MUC1-201ENST00000337604 CDIP1Q9H305 208 aa9.14□□□□□ -0.95
MUC1-201ENST00000337604 SFTA2Q6UW10 78 aa9.13□□□□□ -0.95
MUC1-201ENST00000337604 SPRR4Q96PI1 79 aa9.13□□□□□ -0.95
MUC1-201ENST00000337604 A0A0U1RRA0 63 aa9.12□□□□□ -0.95
MUC1-201ENST00000337604 LINC00158P58513 81 aa9.12□□□□□ -0.95
MUC1-201ENST00000337604 TMEM223A0PJW6 202 aa9.11□□□□□ -0.95
MUC1-201ENST00000337604 CHTOPQ9Y3Y2 248 aaKnown RBP9.11□□□□□ -0.95
MUC1-201ENST00000337604 PPDPFQ9H3Y8 114 aa9.1□□□□□ -0.95
MUC1-201ENST00000337604 SMIM13P0DJ93 91 aa9.08□□□□□ -0.96
MUC1-201ENST00000337604 TRAV12-1A0A0B4J245 112 aa9.07□□□□□ -0.96
MUC1-201ENST00000337604 SPRR1AP35321 89 aa9.07□□□□□ -0.96
MUC1-201ENST00000337604 KRTAP4-16G5E9R7 235 aaPredicted RBP9.06□□□□□ -0.96
MUC1-201ENST00000337604 PRYO14603 147 aa9.06□□□□□ -0.96
MUC1-201ENST00000337604 NCR3O14931 201 aa9.06□□□□□ -0.96
MUC1-201ENST00000337604 SPAG11AQ6PDA7 123 aa9.06□□□□□ -0.96
MUC1-201ENST00000337604 BOD1L2Q8IYS8 172 aa9.06□□□□□ -0.96
MUC1-201ENST00000337604 MIR7-3HGQ8N6C7 128 aa9.05□□□□□ -0.96
MUC1-201ENST00000337604 DAND5Q8N907 189 aa9.05□□□□□ -0.96
MUC1-201ENST00000337604 Q8NBF4 154 aa9.05□□□□□ -0.96
MUC1-201ENST00000337604 IFI27L1Q96BM0 104 aa9.05□□□□□ -0.96
MUC1-201ENST00000337604 ZNF706Q9Y5V0 76 aaPredicted RBP9.05□□□□□ -0.96
MUC1-201ENST00000337604 FP248Q71RG6 208 aaPredicted RBP9.04□□□□□ -0.96
MUC1-201ENST00000337604 LINC00337Q8N6G1 96 aa9.04□□□□□ -0.96
MUC1-201ENST00000337604 YPEL4Q96NS1 127 aa9.04□□□□□ -0.96
MUC1-201ENST00000337604 KCNQ1DNQ9H478 68 aa9.04□□□□□ -0.96
MUC1-201ENST00000337604 APOC3P02656 99 aa9.03□□□□□ -0.96
MUC1-201ENST00000337604 KRTAP13-3Q3SY46 172 aa9.03□□□□□ -0.96
MUC1-201ENST00000337604 MEIG1Q5JSS6 88 aa9.03□□□□□ -0.96
MUC1-201ENST00000337604 SMCR5Q8TEV8 140 aa9.03□□□□□ -0.96
MUC1-201ENST00000337604 TRBV10-3A0A0K0K1G6 114 aa9.02□□□□□ -0.97
MUC1-201ENST00000337604 CHCHD1Q96BP2 118 aaKnown RBP9.02□□□□□ -0.97
MUC1-201ENST00000337604 HERV-K104P63124 156 aa9.01□□□□□ -0.97
MUC1-201ENST00000337604 LINC00483Q53H64 154 aa9.01□□□□□ -0.97
MUC1-201ENST00000337604 NDUFA12Q9UI09 145 aa9.01□□□□□ -0.97
MUC1-201ENST00000337604 ATP6V1G1O75348 118 aa9□□□□□ -0.97
MUC1-201ENST00000337604 TSPEAR-AS2P59090 65 aa9□□□□□ -0.97
MUC1-201ENST00000337604 ETDCA0A1B0GVM5 59 aa8.99□□□□□ -0.97
MUC1-201ENST00000337604 C4orf48Q5BLP8 95 aa8.99□□□□□ -0.97
MUC1-201ENST00000337604 FAM19A2Q8N3H0 131 aa8.99□□□□□ -0.97
MUC1-201ENST00000337604 ERC2-IT1O76042 136 aa8.98□□□□□ -0.97
MUC1-201ENST00000337604 SNAPINO95295 136 aa8.98□□□□□ -0.97
MUC1-201ENST00000337604 SVBPQ8N300 66 aa8.98□□□□□ -0.97
MUC1-201ENST00000337604 B5MCH6 92 aa8.97□□□□□ -0.97
MUC1-201ENST00000337604 SPINK1P00995 79 aa8.97□□□□□ -0.97
MUC1-201ENST00000337604 KRTAP4-1Q9BYQ7 146 aa8.97□□□□□ -0.97
MUC1-201ENST00000337604 ASB16-AS1Q495Z4 193 aa8.96□□□□□ -0.98
MUC1-201ENST00000337604 GAGE2AQ6NT46 116 aa8.96□□□□□ -0.98
MUC1-201ENST00000337604 LOC107984156A0A0G2JMH3 177 aa8.95□□□□□ -0.98
MUC1-201ENST00000337604 MYMXA0A1B0GTQ4 84 aa8.95□□□□□ -0.98
MUC1-201ENST00000337604 H0Y8G0 127 aa8.95□□□□□ -0.98
MUC1-201ENST00000337604 MOBPQ13875 183 aa8.95□□□□□ -0.98
MUC1-201ENST00000337604 ARL17AQ8IVW1 177 aa8.95□□□□□ -0.98
MUC1-201ENST00000337604 Q9BRP9 147 aa8.95□□□□□ -0.98
MUC1-201ENST00000337604 LINC00587B1AMM8 73 aa8.94□□□□□ -0.98
MUC1-201ENST00000337604 HSBP1O75506 76 aa8.94□□□□□ -0.98
MUC1-201ENST00000337604 LINC00310P59036 64 aa8.94□□□□□ -0.98
MUC1-201ENST00000337604 NDUFA5Q16718 116 aa8.94□□□□□ -0.98
MUC1-201ENST00000337604 IGLV9-49A0A0B4J1Y8 123 aa8.93□□□□□ -0.98
MUC1-201ENST00000337604 DDTP30046 118 aa8.93□□□□□ -0.98
MUC1-201ENST00000337604 Q8N377 158 aa8.93□□□□□ -0.98
MUC1-201ENST00000337604 MAP1LC3CQ9BXW4 147 aa8.93□□□□□ -0.98
MUC1-201ENST00000337604 TRBV10-2A0A0K0K1G8 114 aa8.92□□□□□ -0.98
MUC1-201ENST00000337604 KRTAP9-6A0A140TA67 174 aa8.92□□□□□ -0.98
MUC1-201ENST00000337604 LEPROTO15243 131 aa8.92□□□□□ -0.98
MUC1-201ENST00000337604 Q6ZRX8 168 aa8.92□□□□□ -0.98
MUC1-201ENST00000337604 RPS29P62273 56 aaKnown RBP8.91□□□□□ -0.98
MUC1-201ENST00000337604 LCE2DQ5TA82 110 aaPredicted RBP8.9□□□□□ -0.98
MUC1-201ENST00000337604 SPANXB1Q9NS25 103 aaPredicted RBP8.9□□□□□ -0.98
MUC1-201ENST00000337604 J3QQQ9 107 aa8.89□□□□□ -0.99
MUC1-201ENST00000337604 IGLV6-57P01721 117 aa8.89□□□□□ -0.99
MUC1-201ENST00000337604 S100A12P80511 92 aa8.89□□□□□ -0.99
MUC1-201ENST00000337604 SSBP3-AS1Q7Z2R9 100 aa8.89□□□□□ -0.99
MUC1-201ENST00000337604 EIF4EBP3O60516 100 aaPredicted RBP8.88□□□□□ -0.99
MUC1-201ENST00000337604 SERF1AO75920 110 aa8.88□□□□□ -0.99
MUC1-201ENST00000337604 LEPROTL1O95214 131 aa8.88□□□□□ -0.99
MUC1-201ENST00000337604 SOSTDC1Q6X4U4 206 aa8.88□□□□□ -0.99
MUC1-201ENST00000337604 PMCHL2Q9BQD1 86 aa8.88□□□□□ -0.99
MUC1-201ENST00000337604 TRGC2P03986 189 aa8.87□□□□□ -0.99
MUC1-201ENST00000337604 PLNP26678 52 aa8.87□□□□□ -0.99
MUC1-201ENST00000337604 NDUFC2O95298 119 aa8.86□□□□□ -0.99
MUC1-201ENST00000337604 DPM2O94777 84 aa8.85□□□□□ -0.99
MUC1-201ENST00000337604 NMUP48645 174 aa8.85□□□□□ -0.99
MUC1-201ENST00000337604 SEC61BP60468 96 aaKnown RBP8.85□□□□□ -0.99
MUC1-201ENST00000337604 TRAV23DV6A0A075B6W5 121 aa8.84□□□□□ -0.99
MUC1-201ENST00000337604 SLC25A20O43772 301 aa8.84□□□□□ -0.99
MUC1-201ENST00000337604 XP32Q5T750 250 aa8.84□□□□□ -0.99
MUC1-201ENST00000337604 MIEN1Q9BRT3 115 aa8.84□□□□□ -0.99
MUC1-201ENST00000337604 FABP4P15090 132 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms