RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 KRTAP1-1Q07627 177 aa10.31□□□□□ -0.76
C9orf47-201ENST00000334490 C6orf48Q9UBA6 75 aa10.29□□□□□ -0.76
C9orf47-201ENST00000334490 DSPP15924 2871 aaKnown RBP10.29□□□□□ -0.76
C9orf47-201ENST00000334490 CSNK1G2-AS1Q8NCQ2 148 aa10.28□□□□□ -0.76
C9orf47-201ENST00000334490 Q6JHZ5 121 aa10.28□□□□□ -0.76
C9orf47-201ENST00000334490 LAMA2P24043 3122 aaKnown RBP10.27□□□□□ -0.77
C9orf47-201ENST00000334490 LINC00575Q6W349 94 aa10.26□□□□□ -0.77
C9orf47-201ENST00000334490 IGLV5-45A0A087WSX0 123 aa10.26□□□□□ -0.77
C9orf47-201ENST00000334490 SMCR5Q8TEV8 140 aa10.26□□□□□ -0.77
C9orf47-201ENST00000334490 STAB1Q9NY15 2570 aa10.25□□□□□ -0.77
C9orf47-201ENST00000334490 LINC00167Q96N53 147 aa10.25□□□□□ -0.77
C9orf47-201ENST00000334490 CFAP54Q96N23 3096 aa10.25□□□□□ -0.77
C9orf47-201ENST00000334490 C19orf73Q9NVV2 129 aa10.24□□□□□ -0.77
C9orf47-201ENST00000334490 TRIOO75962 3097 aa10.24□□□□□ -0.77
C9orf47-201ENST00000334490 A0A087WSZ3 146 aa10.24□□□□□ -0.77
C9orf47-201ENST00000334490 SEC61GP60059 68 aa10.24□□□□□ -0.77
C9orf47-201ENST00000334490 FAM19A3Q7Z5A8 133 aa10.24□□□□□ -0.77
C9orf47-201ENST00000334490 SPATA3Q8NHX4 192 aa10.23□□□□□ -0.77
C9orf47-201ENST00000334490 TEX15Q9BXT5 2789 aa10.21□□□□□ -0.77
C9orf47-201ENST00000334490 RTL8CO15255 209 aa10.21□□□□□ -0.77
C9orf47-201ENST00000334490 UNC80Q8N2C7 3258 aa10.21□□□□□ -0.78
C9orf47-201ENST00000334490 UQCRQO14949 82 aa10.21□□□□□ -0.78
C9orf47-201ENST00000334490 AKAP13Q12802 2813 aa10.2□□□□□ -0.78
C9orf47-201ENST00000334490 DNAH10OSP0CZ25 163 aa10.2□□□□□ -0.78
C9orf47-201ENST00000334490 GIG44P09565 113 aaPredicted RBP10.2□□□□□ -0.78
C9orf47-201ENST00000334490 IMUPQ9GZP8 106 aa10.2□□□□□ -0.78
C9orf47-201ENST00000334490 COL6A5A8TX70 2615 aa10.19□□□□□ -0.78
C9orf47-201ENST00000334490 IGHV6-1A0A0B4J1U7 121 aa10.19□□□□□ -0.78
C9orf47-201ENST00000334490 C16orf90A8MZG2 172 aa10.18□□□□□ -0.78
C9orf47-201ENST00000334490 C3orf22Q8N5N4 141 aa10.17□□□□□ -0.78
C9orf47-201ENST00000334490 PHF5AQ7RTV0 110 aaKnown RBP10.16□□□□□ -0.78
C9orf47-201ENST00000334490 MAP1AP78559 2803 aaPredicted RBP10.16□□□□□ -0.78
C9orf47-201ENST00000334490 XGP55808 180 aa10.16□□□□□ -0.78
C9orf47-201ENST00000334490 XIRP2A4UGR9 3374 aa10.16□□□□□ -0.78
C9orf47-201ENST00000334490 FAM240AA0A1B0GVK7 77 aa10.16□□□□□ -0.78
C9orf47-201ENST00000334490 SOSTDC1Q6X4U4 206 aa10.16□□□□□ -0.78
C9orf47-201ENST00000334490 DEFB116Q30KQ4 102 aa10.15□□□□□ -0.78
C9orf47-201ENST00000334490 UNC79Q9P2D8 2635 aa10.15□□□□□ -0.78
C9orf47-201ENST00000334490 IGSF10Q6WRI0 2623 aa10.15□□□□□ -0.78
C9orf47-201ENST00000334490 FAM30AQ9NZY2 134 aa10.15□□□□□ -0.78
C9orf47-201ENST00000334490 GVQW2A0A096LPI5 108 aaPredicted RBP10.15□□□□□ -0.79
C9orf47-201ENST00000334490 SERP2Q8N6R1 65 aa10.14□□□□□ -0.79
C9orf47-201ENST00000334490 SNURFQ9Y675 71 aa10.14□□□□□ -0.79
C9orf47-201ENST00000334490 J3KT08 172 aa10.14□□□□□ -0.79
C9orf47-201ENST00000334490 CHTF8P0CG12 524 aa10.14□□□□□ -0.79
C9orf47-201ENST00000334490 KIAA0087Q14695 138 aa10.13□□□□□ -0.79
C9orf47-201ENST00000334490 Q8N9L7 120 aa10.13□□□□□ -0.79
C9orf47-201ENST00000334490 PRR4Q16378 134 aa10.12□□□□□ -0.79
C9orf47-201ENST00000334490 BAHCC1Q9P281 2608 aa10.12□□□□□ -0.79
C9orf47-201ENST00000334490 FAM229AH3BQW9 127 aa10.12□□□□□ -0.79
C9orf47-201ENST00000334490 LINC01547P58512 204 aaPredicted RBP10.12□□□□□ -0.79
C9orf47-201ENST00000334490 CHD6Q8TD26 2715 aa10.11□□□□□ -0.79
C9orf47-201ENST00000334490 TM2D3Q9BRN9 247 aa10.11□□□□□ -0.79
C9orf47-201ENST00000334490 FAM236DA0A1B0GTK5 79 aa10.1□□□□□ -0.79
C9orf47-201ENST00000334490 FAM236CP0DP71 79 aa10.1□□□□□ -0.79
C9orf47-201ENST00000334490 LIMD2Q9BT23 127 aa10.1□□□□□ -0.79
C9orf47-201ENST00000334490 A0A087WVE0 104 aa10.1□□□□□ -0.79
C9orf47-201ENST00000334490 MOBPQ13875 183 aa10.09□□□□□ -0.79
C9orf47-201ENST00000334490 Q6ZRP5 223 aa10.09□□□□□ -0.79
C9orf47-201ENST00000334490 Q6ZVQ6 151 aa10.07□□□□□ -0.8
C9orf47-201ENST00000334490 LINC00208Q96KT6 92 aa10.07□□□□□ -0.8
C9orf47-201ENST00000334490 LINC00612Q8N6U2 182 aa10.07□□□□□ -0.8
C9orf47-201ENST00000334490 RETNLBQ9BQ08 111 aa10.06□□□□□ -0.8
C9orf47-201ENST00000334490 SPACA4Q8TDM5 124 aa10.06□□□□□ -0.8
C9orf47-201ENST00000334490 LINC00846Q9NV44 126 aa10.05□□□□□ -0.8
C9orf47-201ENST00000334490 EPM2AB3EWF7 344 aa10.05□□□□□ -0.8
C9orf47-201ENST00000334490 NDUFC1O43677 76 aa10.05□□□□□ -0.8
C9orf47-201ENST00000334490 ELOF1P60002 83 aaKnown RBP10.05□□□□□ -0.8
C9orf47-201ENST00000334490 Q6ZRX8 168 aa10.05□□□□□ -0.8
C9orf47-201ENST00000334490 CRYGAP11844 174 aa10.04□□□□□ -0.8
C9orf47-201ENST00000334490 TRBV7-6A0A0J9YX20 115 aa10.03□□□□□ -0.8
C9orf47-201ENST00000334490 COX7CP15954 63 aa10.03□□□□□ -0.8
C9orf47-201ENST00000334490 PRR34Q9NV39 138 aa10.03□□□□□ -0.8
C9orf47-201ENST00000334490 NOTCH1P46531 2555 aa10.03□□□□□ -0.8
C9orf47-201ENST00000334490 FAM218AQ96MZ4 157 aa10.02□□□□□ -0.8
C9orf47-201ENST00000334490 MPLKIPQ8TAP9 179 aa10.02□□□□□ -0.81
C9orf47-201ENST00000334490 VPS13AQ96RL7 3174 aa10.02□□□□□ -0.81
C9orf47-201ENST00000334490 CDH23Q9H251 3354 aa10.01□□□□□ -0.81
C9orf47-201ENST00000334490 FAM168BA1KXE4 195 aa10.01□□□□□ -0.81
C9orf47-201ENST00000334490 VPREB1P12018 145 aa10□□□□□ -0.81
C9orf47-201ENST00000334490 TRAV7A0A075B6U4 112 aa10□□□□□ -0.81
C9orf47-201ENST00000334490 ST20-AS1Q8NBB2 130 aa9.99□□□□□ -0.81
C9orf47-201ENST00000334490 BCE1O60756 84 aa9.99□□□□□ -0.81
C9orf47-201ENST00000334490 Q6Q795 121 aa9.98□□□□□ -0.81
C9orf47-201ENST00000334490 TYMSOSQ8TAI1 123 aa9.98□□□□□ -0.81
C9orf47-201ENST00000334490 SERTAD4-AS1Q5TG53 156 aa9.97□□□□□ -0.81
C9orf47-201ENST00000334490 LITAFQ99732 161 aa9.97□□□□□ -0.81
C9orf47-201ENST00000334490 HCG22E2RYF7 251 aa9.96□□□□□ -0.82
C9orf47-201ENST00000334490 C15orf56Q8N910 161 aa9.96□□□□□ -0.82
C9orf47-201ENST00000334490 LINC00476Q8WZB0 136 aa9.96□□□□□ -0.82
C9orf47-201ENST00000334490 A0A087WTM6 91 aa9.95□□□□□ -0.82
C9orf47-201ENST00000334490 ATP5EP56381 51 aaPredicted RBP9.95□□□□□ -0.82
C9orf47-201ENST00000334490 PCOTHQ58A44 107 aa9.95□□□□□ -0.82
C9orf47-201ENST00000334490 SERP1Q9Y6X1 66 aa9.95□□□□□ -0.82
C9orf47-201ENST00000334490 Q8NBF4 154 aa9.94□□□□□ -0.82
C9orf47-201ENST00000334490 APLNQ9ULZ1 77 aa9.94□□□□□ -0.82
C9orf47-201ENST00000334490 CR1P17927 2039 aa9.94□□□□□ -0.82
C9orf47-201ENST00000334490 GCN1Q92616 2671 aaKnown RBP9.94□□□□□ -0.82
C9orf47-201ENST00000334490 CCDC179H3BU77 68 aa9.94□□□□□ -0.82
C9orf47-201ENST00000334490 PLA2G1BP04054 148 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms