RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 DEFB4AO15263 64 aa5.45□□□□□ -1.54
VMA21-201ENST00000330374 LCE2DQ5TA82 110 aaPredicted RBP5.45□□□□□ -1.54
VMA21-201ENST00000330374 M0R2N4 97 aa5.45□□□□□ -1.54
VMA21-201ENST00000330374 SCXQ7RTU7 201 aa5.45□□□□□ -1.54
VMA21-201ENST00000330374 NANOS2P60321 138 aaKnown RBP5.44□□□□□ -1.54
VMA21-201ENST00000330374 SNURFQ9Y675 71 aa5.44□□□□□ -1.54
VMA21-201ENST00000330374 TMEM256-PLSCR3K7ERE1 68 aa5.44□□□□□ -1.54
VMA21-201ENST00000330374 JMJD7-PLA2G4BH0Y9G9 81 aa5.43□□□□□ -1.54
VMA21-201ENST00000330374 NOTCH2Q04721 2471 aa5.43□□□□□ -1.54
VMA21-201ENST00000330374 RPS28P62857 69 aaKnown RBP5.43□□□□□ -1.54
VMA21-201ENST00000330374 SPATA3Q8NHX4 192 aa5.43□□□□□ -1.54
VMA21-201ENST00000330374 ANGP03950 147 aaKnown RBP5.43□□□□□ -1.54
VMA21-201ENST00000330374 Q8NDZ9 215 aa5.43□□□□□ -1.54
VMA21-201ENST00000330374 BBC3Q96PG8 261 aaPredicted RBP5.42□□□□□ -1.54
VMA21-201ENST00000330374 C6orf223Q8N319 242 aa5.42□□□□□ -1.54
VMA21-201ENST00000330374 LY6G6DO95868 133 aa5.42□□□□□ -1.54
VMA21-201ENST00000330374 FSHBP01225 129 aa5.42□□□□□ -1.54
VMA21-201ENST00000330374 RBM3P98179 157 aaKnown RBP5.42□□□□□ -1.54
VMA21-201ENST00000330374 DNAJC9-AS1A6NH13 148 aa5.41□□□□□ -1.54
VMA21-201ENST00000330374 Q8IZM0 81 aa5.41□□□□□ -1.54
VMA21-201ENST00000330374 TRAV10A0A0B4J240 114 aa5.41□□□□□ -1.54
VMA21-201ENST00000330374 CHCHD10Q8WYQ3 142 aaPredicted RBP5.41□□□□□ -1.54
VMA21-201ENST00000330374 C1orf195Q5TG92 126 aa5.4□□□□□ -1.54
VMA21-201ENST00000330374 HTN3P15516 51 aa5.4□□□□□ -1.54
VMA21-201ENST00000330374 FAM236DA0A1B0GTK5 79 aa5.4□□□□□ -1.55
VMA21-201ENST00000330374 FAM236CP0DP71 79 aa5.4□□□□□ -1.55
VMA21-201ENST00000330374 C10orf25Q5T742 122 aa5.4□□□□□ -1.55
VMA21-201ENST00000330374 UNQ6190/PRO20217Q6UXQ8 127 aa5.4□□□□□ -1.55
VMA21-201ENST00000330374 Q6ZQY7 126 aa5.4□□□□□ -1.55
VMA21-201ENST00000330374 RMI2Q96E14 147 aa5.4□□□□□ -1.55
VMA21-201ENST00000330374 LINC01006Q8NI28 216 aa5.4□□□□□ -1.55
VMA21-201ENST00000330374 VWFP04275 2813 aa5.4□□□□□ -1.55
VMA21-201ENST00000330374 KRTAP23-1A1A580 65 aa5.39□□□□□ -1.55
VMA21-201ENST00000330374 Q5XG85 94 aa5.39□□□□□ -1.55
VMA21-201ENST00000330374 XAGE1AQ9HD64 81 aa5.39□□□□□ -1.55
VMA21-201ENST00000330374 PRR26Q8N8Z3 221 aa5.39□□□□□ -1.55
VMA21-201ENST00000330374 CSNK1G2-AS1Q8NCQ2 148 aa5.39□□□□□ -1.55
VMA21-201ENST00000330374 UNC79Q9P2D8 2635 aa5.38□□□□□ -1.55
VMA21-201ENST00000330374 LINC01547P58512 204 aaPredicted RBP5.38□□□□□ -1.55
VMA21-201ENST00000330374 REG3AQ06141 175 aa5.38□□□□□ -1.55
VMA21-201ENST00000330374 ATP5EP2Q5VTU8 51 aa5.38□□□□□ -1.55
VMA21-201ENST00000330374 LINC00575Q6W349 94 aa5.38□□□□□ -1.55
VMA21-201ENST00000330374 NDUFC2O95298 119 aa5.38□□□□□ -1.55
VMA21-201ENST00000330374 Q6ZQT0 140 aa5.38□□□□□ -1.55
VMA21-201ENST00000330374 KIAA0087Q14695 138 aa5.38□□□□□ -1.55
VMA21-201ENST00000330374 MPLKIPQ8TAP9 179 aa5.38□□□□□ -1.55
VMA21-201ENST00000330374 Q75L30 129 aa5.37□□□□□ -1.55
VMA21-201ENST00000330374 LINC00167Q96N53 147 aa5.37□□□□□ -1.55
VMA21-201ENST00000330374 USP24Q9UPU5 2620 aa5.37□□□□□ -1.55
VMA21-201ENST00000330374 PKIGQ9Y2B9 76 aa5.37□□□□□ -1.55
VMA21-201ENST00000330374 F8WEM9 126 aa5.37□□□□□ -1.55
VMA21-201ENST00000330374 SPAG11BQ08648 103 aa5.37□□□□□ -1.55
VMA21-201ENST00000330374 DEFB113Q30KQ7 82 aa5.36□□□□□ -1.55
VMA21-201ENST00000330374 Q8N9L7 120 aa5.36□□□□□ -1.55
VMA21-201ENST00000330374 F8P00451 2351 aa5.36□□□□□ -1.55
VMA21-201ENST00000330374 UBE2AP49459 152 aa5.36□□□□□ -1.55
VMA21-201ENST00000330374 PRO0255Q9UI72 69 aa5.36□□□□□ -1.55
VMA21-201ENST00000330374 SMIM26A0A096LP01 95 aa5.36□□□□□ -1.55
VMA21-201ENST00000330374 H7BZZ5 65 aa5.35□□□□□ -1.55
VMA21-201ENST00000330374 IGLV1-51P01701 117 aa5.35□□□□□ -1.55
VMA21-201ENST00000330374 CYSRT1A8MQ03 144 aa5.35□□□□□ -1.55
VMA21-201ENST00000330374 REG3GQ6UW15 175 aa5.35□□□□□ -1.55
VMA21-201ENST00000330374 TM2D3Q9BRN9 247 aa5.35□□□□□ -1.55
VMA21-201ENST00000330374 TRAV7A0A075B6U4 112 aa5.35□□□□□ -1.55
VMA21-201ENST00000330374 TRBV10-3A0A0K0K1G6 114 aa5.35□□□□□ -1.55
VMA21-201ENST00000330374 DEFB135Q30KP9 77 aa5.35□□□□□ -1.55
VMA21-201ENST00000330374 KLK12Q9UKR0 248 aa5.35□□□□□ -1.55
VMA21-201ENST00000330374 ITPR2Q14571 2701 aa5.35□□□□□ -1.55
VMA21-201ENST00000330374 A0A1B0GUV1 79 aa5.35□□□□□ -1.55
VMA21-201ENST00000330374 PRAC1Q96KF2 57 aa5.34□□□□□ -1.55
VMA21-201ENST00000330374 CMC4P56277 68 aaPredicted RBP5.33□□□□□ -1.56
VMA21-201ENST00000330374 LYPD5Q6UWN5 251 aa5.33□□□□□ -1.56
VMA21-201ENST00000330374 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.33□□□□□ -1.56
VMA21-201ENST00000330374 DAD1P61803 113 aa5.33□□□□□ -1.56
VMA21-201ENST00000330374 COX17Q14061 63 aa5.33□□□□□ -1.56
VMA21-201ENST00000330374 HIGD2BQ4VC39 106 aa5.33□□□□□ -1.56
VMA21-201ENST00000330374 LINC00336Q6ZUF6 198 aa5.33□□□□□ -1.56
VMA21-201ENST00000330374 MUC7Q8TAX7 377 aa5.33□□□□□ -1.56
VMA21-201ENST00000330374 LINC00474Q9P2X8 69 aa5.33□□□□□ -1.56
VMA21-201ENST00000330374 NDUFS5O43920 106 aa5.32□□□□□ -1.56
VMA21-201ENST00000330374 APOC4P55056 127 aa5.32□□□□□ -1.56
VMA21-201ENST00000330374 DIRC1Q969H9 104 aa5.32□□□□□ -1.56
VMA21-201ENST00000330374 SERP1Q9Y6X1 66 aa5.32□□□□□ -1.56
VMA21-201ENST00000330374 ATRQ13535 2644 aa5.31□□□□□ -1.56
VMA21-201ENST00000330374 TEP1Q99973 2627 aaKnown RBP5.31□□□□□ -1.56
VMA21-201ENST00000330374 DEFB105AQ8NG35 78 aa5.31□□□□□ -1.56
VMA21-201ENST00000330374 UBR5O95071 2799 aaPredicted RBP5.31□□□□□ -1.56
VMA21-201ENST00000330374 LOC110117498A0A087WWA1 95 aa5.31□□□□□ -1.56
VMA21-201ENST00000330374 C3orf84H3BNL1 204 aa5.3□□□□□ -1.56
VMA21-201ENST00000330374 IGLV7-46A0A075B6I9 117 aa5.3□□□□□ -1.56
VMA21-201ENST00000330374 PKD1L1Q8TDX9 2849 aa5.3□□□□□ -1.56
VMA21-201ENST00000330374 ZNF73O43830 326 aaPredicted RBP5.3□□□□□ -1.56
VMA21-201ENST00000330374 COX7BP24311 80 aa5.3□□□□□ -1.56
VMA21-201ENST00000330374 CELA1Q9UNI1 258 aa5.29□□□□□ -1.56
VMA21-201ENST00000330374 FASNP49327 2511 aaKnown RBP5.29□□□□□ -1.56
VMA21-201ENST00000330374 BPY2O14599 106 aa5.29□□□□□ -1.56
VMA21-201ENST00000330374 IGLV6-57P01721 117 aa5.29□□□□□ -1.56
VMA21-201ENST00000330374 NREPQ16612 68 aa5.29□□□□□ -1.56
VMA21-201ENST00000330374 MIFP14174 115 aa5.29□□□□□ -1.56
VMA21-201ENST00000330374 C6orf48Q9UBA6 75 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms