RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 C16orf74Q96GX8 76 aa5.75□□□□□ -1.49
SKA2-201ENST00000330137 CMC4P56277 68 aaPredicted RBP5.74□□□□□ -1.49
SKA2-201ENST00000330137 CCL19Q99731 98 aa5.74□□□□□ -1.49
SKA2-201ENST00000330137 CREBBPQ92793 2442 aa5.74□□□□□ -1.49
SKA2-201ENST00000330137 AKAP6Q13023 2319 aa5.74□□□□□ -1.49
SKA2-201ENST00000330137 HRNRQ86YZ3 2850 aaPredicted RBP5.74□□□□□ -1.49
SKA2-201ENST00000330137 M0R2N4 97 aa5.73□□□□□ -1.49
SKA2-201ENST00000330137 RNASE1P07998 156 aaKnown RBP5.73□□□□□ -1.49
SKA2-201ENST00000330137 A0A1W2PPR1 153 aa5.73□□□□□ -1.49
SKA2-201ENST00000330137 IGKV4-1P06312 121 aa5.73□□□□□ -1.49
SKA2-201ENST00000330137 KIAA0087Q14695 138 aa5.73□□□□□ -1.49
SKA2-201ENST00000330137 SPG11Q96JI7 2443 aa5.73□□□□□ -1.49
SKA2-201ENST00000330137 IGHV4-61A0A0C4DH41 118 aa5.72□□□□□ -1.49
SKA2-201ENST00000330137 CELA1Q9UNI1 258 aa5.72□□□□□ -1.49
SKA2-201ENST00000330137 Q6ZQY7 126 aa5.72□□□□□ -1.49
SKA2-201ENST00000330137 CYP4F30PQ9H0H9 118 aa5.72□□□□□ -1.49
SKA2-201ENST00000330137 MSMBP08118 114 aa5.72□□□□□ -1.49
SKA2-201ENST00000330137 CD164L2Q6UWJ8 174 aa5.72□□□□□ -1.49
SKA2-201ENST00000330137 DEFB113Q30KQ7 82 aa5.71□□□□□ -1.5
SKA2-201ENST00000330137 CCDC168Q8NDH2 2452 aa5.71□□□□□ -1.5
SKA2-201ENST00000330137 PDZD2O15018 2839 aa5.71□□□□□ -1.5
SKA2-201ENST00000330137 C4orf3Q8WVX3 66 aa5.7□□□□□ -1.5
SKA2-201ENST00000330137 DIRC1Q969H9 104 aa5.7□□□□□ -1.5
SKA2-201ENST00000330137 TRGV4A0A0C4DH28 118 aa5.7□□□□□ -1.5
SKA2-201ENST00000330137 IGKV3OR2-268A0A0C4DH90 116 aa5.7□□□□□ -1.5
SKA2-201ENST00000330137 A0A0J9YWU9 116 aa5.7□□□□□ -1.5
SKA2-201ENST00000330137 IGHV4-30-4P0DP06 118 aa5.7□□□□□ -1.5
SKA2-201ENST00000330137 PRR3P79522 188 aaKnown RBP5.7□□□□□ -1.5
SKA2-201ENST00000330137 MYO9AB2RTY4 2548 aa5.69□□□□□ -1.5
SKA2-201ENST00000330137 TRGV2A0A075B6R0 118 aa5.69□□□□□ -1.5
SKA2-201ENST00000330137 DAD1P61803 113 aa5.69□□□□□ -1.5
SKA2-201ENST00000330137 NOP10Q9NPE3 64 aaKnown RBP5.69□□□□□ -1.5
SKA2-201ENST00000330137 MAP1AP78559 2803 aaPredicted RBP5.69□□□□□ -1.5
SKA2-201ENST00000330137 C10orf99Q6UWK7 81 aa5.69□□□□□ -1.5
SKA2-201ENST00000330137 Q6ZRP5 223 aa5.69□□□□□ -1.5
SKA2-201ENST00000330137 MDFIQ99750 246 aa5.69□□□□□ -1.5
SKA2-201ENST00000330137 VPS13CQ709C8 3753 aa5.68□□□□□ -1.5
SKA2-201ENST00000330137 GVQW2A0A096LPI5 108 aaPredicted RBP5.68□□□□□ -1.5
SKA2-201ENST00000330137 B4DSR2 109 aa5.68□□□□□ -1.5
SKA2-201ENST00000330137 SLURP1P55000 103 aa5.68□□□□□ -1.5
SKA2-201ENST00000330137 ELOF1P60002 83 aaKnown RBP5.68□□□□□ -1.5
SKA2-201ENST00000330137 ZCCHC13Q8WW36 166 aaKnown RBP5.68□□□□□ -1.5
SKA2-201ENST00000330137 NDUFB1O75438 58 aa5.68□□□□□ -1.5
SKA2-201ENST00000330137 ODF3L2Q3SX64 289 aa5.68□□□□□ -1.5
SKA2-201ENST00000330137 ZNF702PQ9H963 129 aa5.67□□□□□ -1.5
SKA2-201ENST00000330137 OTOGQ6ZRI0 2925 aa5.67□□□□□ -1.5
SKA2-201ENST00000330137 HIGD2AQ9BW72 106 aa5.67□□□□□ -1.5
SKA2-201ENST00000330137 CELSR1Q9NYQ6 3014 aa5.67□□□□□ -1.5
SKA2-201ENST00000330137 C1orf64Q8NEQ6 169 aa5.67□□□□□ -1.5
SKA2-201ENST00000330137 AKAP9Q99996 3911 aa5.66□□□□□ -1.5
SKA2-201ENST00000330137 DEFB112Q30KQ8 113 aa5.66□□□□□ -1.5
SKA2-201ENST00000330137 HIGD2BQ4VC39 106 aa5.66□□□□□ -1.5
SKA2-201ENST00000330137 UBE2BP63146 152 aa5.66□□□□□ -1.5
SKA2-201ENST00000330137 SCXQ7RTU7 201 aa5.66□□□□□ -1.5
SKA2-201ENST00000330137 ZNF73O43830 326 aaPredicted RBP5.65□□□□□ -1.5
SKA2-201ENST00000330137 DSCR9P59020 149 aa5.65□□□□□ -1.5
SKA2-201ENST00000330137 TRAV22A0A0B4J277 110 aa5.65□□□□□ -1.51
SKA2-201ENST00000330137 Q8NDZ9 215 aa5.65□□□□□ -1.51
SKA2-201ENST00000330137 ITPR3Q14573 2671 aa5.64□□□□□ -1.51
SKA2-201ENST00000330137 LINC00612Q8N6U2 182 aa5.64□□□□□ -1.51
SKA2-201ENST00000330137 MAPK1IP1LQ8NDC0 245 aa5.64□□□□□ -1.51
SKA2-201ENST00000330137 Q6YL49 198 aa5.63□□□□□ -1.51
SKA2-201ENST00000330137 ETDCA0A1B0GVM5 59 aa5.63□□□□□ -1.51
SKA2-201ENST00000330137 MRPL55Q7Z7F7 128 aaKnown RBP5.63□□□□□ -1.51
SKA2-201ENST00000330137 CHCHD10Q8WYQ3 142 aaPredicted RBP5.63□□□□□ -1.51
SKA2-201ENST00000330137 SMR3AQ99954 134 aa5.63□□□□□ -1.51
SKA2-201ENST00000330137 PSCAO43653 123 aa5.62□□□□□ -1.51
SKA2-201ENST00000330137 KTN1-AS1Q86SY8 53 aa5.62□□□□□ -1.51
SKA2-201ENST00000330137 LINC01006Q8NI28 216 aa5.62□□□□□ -1.51
SKA2-201ENST00000330137 LIMD2Q9BT23 127 aa5.62□□□□□ -1.51
SKA2-201ENST00000330137 NDUFS5O43920 106 aa5.62□□□□□ -1.51
SKA2-201ENST00000330137 UBE2AP49459 152 aa5.62□□□□□ -1.51
SKA2-201ENST00000330137 CSNK1G2-AS1Q8NCQ2 148 aa5.62□□□□□ -1.51
SKA2-201ENST00000330137 F8P00451 2351 aa5.62□□□□□ -1.51
SKA2-201ENST00000330137 ZNF469Q96JG9 3925 aaPredicted RBP5.62□□□□□ -1.51
SKA2-201ENST00000330137 IGLV5-48A0A075B6I7 105 aa5.61□□□□□ -1.51
SKA2-201ENST00000330137 GIG44P09565 113 aaPredicted RBP5.61□□□□□ -1.51
SKA2-201ENST00000330137 LINC00269Q8N2A0 174 aa5.61□□□□□ -1.51
SKA2-201ENST00000330137 FLNAP21333 2647 aaKnown RBP5.61□□□□□ -1.51
SKA2-201ENST00000330137 ABCA2Q9BZC7 2435 aa5.61□□□□□ -1.51
SKA2-201ENST00000330137 KRTAP1-3Q8IUG1 177 aa5.61□□□□□ -1.51
SKA2-201ENST00000330137 TEP1Q99973 2627 aaKnown RBP5.61□□□□□ -1.51
SKA2-201ENST00000330137 SYCNQ0VAF6 134 aa5.61□□□□□ -1.51
SKA2-201ENST00000330137 LINC01356Q8N9X3 169 aa5.61□□□□□ -1.51
SKA2-201ENST00000330137 HIVEP1P15822 2718 aa5.6□□□□□ -1.51
SKA2-201ENST00000330137 FSHBP01225 129 aa5.6□□□□□ -1.51
SKA2-201ENST00000330137 DEFB136Q30KP8 78 aa5.6□□□□□ -1.51
SKA2-201ENST00000330137 SPANXA2-OT1Q8N9U9 137 aa5.6□□□□□ -1.51
SKA2-201ENST00000330137 M0R378 163 aa5.6□□□□□ -1.51
SKA2-201ENST00000330137 REG3AQ06141 175 aa5.6□□□□□ -1.51
SKA2-201ENST00000330137 SPAG11BQ08648 103 aa5.6□□□□□ -1.51
SKA2-201ENST00000330137 C9orf116Q5BN46 136 aaPredicted RBP5.6□□□□□ -1.51
SKA2-201ENST00000330137 SMIM29Q86T20 159 aa5.6□□□□□ -1.51
SKA2-201ENST00000330137 H3BPC8 53 aa5.59□□□□□ -1.51
SKA2-201ENST00000330137 ATP11AUNQ6ZP68 121 aa5.59□□□□□ -1.51
SKA2-201ENST00000330137 PRO0255Q9UI72 69 aa5.59□□□□□ -1.51
SKA2-201ENST00000330137 ACANP16112 2415 aa5.59□□□□□ -1.51
SKA2-201ENST00000330137 GYPEP15421 78 aa5.59□□□□□ -1.52
SKA2-201ENST00000330137 LINC00588Q9Y4M8 146 aa5.59□□□□□ -1.52
SKA2-201ENST00000330137 C18orf65Q6ZTR6 163 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms