RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 CD164L2Q6UWJ8 174 aa7.72□□□□□ -1.17
GINS3-202ENST00000328514 NBEAL1Q6ZS30 2694 aa7.72□□□□□ -1.17
GINS3-202ENST00000328514 MAPK1IP1LQ8NDC0 245 aa7.72□□□□□ -1.17
GINS3-202ENST00000328514 Q6ZVQ6 151 aa7.71□□□□□ -1.18
GINS3-202ENST00000328514 TLN2Q9Y4G6 2542 aa7.71□□□□□ -1.18
GINS3-202ENST00000328514 NDUFC1O43677 76 aa7.7□□□□□ -1.18
GINS3-202ENST00000328514 Q8NDZ9 215 aa7.7□□□□□ -1.18
GINS3-202ENST00000328514 CR1P17927 2039 aa7.69□□□□□ -1.18
GINS3-202ENST00000328514 IGLV6-57P01721 117 aa7.69□□□□□ -1.18
GINS3-202ENST00000328514 JMJD1CQ15652 2540 aa7.69□□□□□ -1.18
GINS3-202ENST00000328514 IGLV1-51P01701 117 aa7.68□□□□□ -1.18
GINS3-202ENST00000328514 FBN1P35555 2871 aaKnown RBP7.68□□□□□ -1.18
GINS3-202ENST00000328514 GYPEP15421 78 aa7.68□□□□□ -1.18
GINS3-202ENST00000328514 SMIM26A0A096LP01 95 aa7.67□□□□□ -1.18
GINS3-202ENST00000328514 RPL35AP18077 110 aaKnown RBP7.67□□□□□ -1.18
GINS3-202ENST00000328514 ATP5EP56381 51 aaPredicted RBP7.67□□□□□ -1.18
GINS3-202ENST00000328514 SPATA3Q8NHX4 192 aa7.67□□□□□ -1.18
GINS3-202ENST00000328514 LAMTOR3Q9UHA4 124 aa7.67□□□□□ -1.18
GINS3-202ENST00000328514 PRO0628Q9UI54 55 aa7.67□□□□□ -1.18
GINS3-202ENST00000328514 TRAV10A0A0B4J240 114 aa7.66□□□□□ -1.18
GINS3-202ENST00000328514 M0R2N4 97 aa7.66□□□□□ -1.18
GINS3-202ENST00000328514 CHCHD10Q8WYQ3 142 aaPredicted RBP7.66□□□□□ -1.18
GINS3-202ENST00000328514 WFDC10AQ9H1F0 79 aa7.66□□□□□ -1.18
GINS3-202ENST00000328514 A0A0J9YWU9 116 aa7.66□□□□□ -1.18
GINS3-202ENST00000328514 TRBV7-4A0A0J9YYF1 115 aa7.66□□□□□ -1.18
GINS3-202ENST00000328514 RNASE1P07998 156 aaKnown RBP7.66□□□□□ -1.18
GINS3-202ENST00000328514 IGHV4-30-4P0DP06 118 aa7.66□□□□□ -1.18
GINS3-202ENST00000328514 HAMPP81172 84 aa7.66□□□□□ -1.18
GINS3-202ENST00000328514 PRO0255Q9UI72 69 aa7.66□□□□□ -1.18
GINS3-202ENST00000328514 WNK1Q9H4A3 2382 aa7.66□□□□□ -1.18
GINS3-202ENST00000328514 C16orf95Q9H693 158 aa7.65□□□□□ -1.18
GINS3-202ENST00000328514 ERC2-IT1O76042 136 aa7.64□□□□□ -1.19
GINS3-202ENST00000328514 C9orf116Q5BN46 136 aaPredicted RBP7.64□□□□□ -1.19
GINS3-202ENST00000328514 LINC00269Q8N2A0 174 aa7.64□□□□□ -1.19
GINS3-202ENST00000328514 CLPSL2Q6UWE3 100 aa7.64□□□□□ -1.19
GINS3-202ENST00000328514 Q6ZQY7 126 aa7.64□□□□□ -1.19
GINS3-202ENST00000328514 Q8N3U1 123 aa7.64□□□□□ -1.19
GINS3-202ENST00000328514 ATRQ13535 2644 aa7.63□□□□□ -1.19
GINS3-202ENST00000328514 FN1P02751 2386 aaKnown RBP7.63□□□□□ -1.19
GINS3-202ENST00000328514 DEFB130BP0DP73 79 aa7.63□□□□□ -1.19
GINS3-202ENST00000328514 DEFB130AP0DP74 79 aa7.63□□□□□ -1.19
GINS3-202ENST00000328514 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.63□□□□□ -1.19
GINS3-202ENST00000328514 FP248Q71RG6 208 aaPredicted RBP7.63□□□□□ -1.19
GINS3-202ENST00000328514 RMI2Q96E14 147 aa7.63□□□□□ -1.19
GINS3-202ENST00000328514 GVQW2A0A096LPI5 108 aaPredicted RBP7.62□□□□□ -1.19
GINS3-202ENST00000328514 TRBV7-6A0A0J9YX20 115 aa7.62□□□□□ -1.19
GINS3-202ENST00000328514 F8WEM9 126 aa7.62□□□□□ -1.19
GINS3-202ENST00000328514 STAB1Q9NY15 2570 aa7.62□□□□□ -1.19
GINS3-202ENST00000328514 KRTAP10-9P60411 292 aa7.62□□□□□ -1.19
GINS3-202ENST00000328514 REG3AQ06141 175 aa7.62□□□□□ -1.19
GINS3-202ENST00000328514 LINC00336Q6ZUF6 198 aa7.62□□□□□ -1.19
GINS3-202ENST00000328514 SNURFQ9Y675 71 aa7.62□□□□□ -1.19
GINS3-202ENST00000328514 DNAJC9-AS1A6NH13 148 aa7.61□□□□□ -1.19
GINS3-202ENST00000328514 LINC01006Q8NI28 216 aa7.61□□□□□ -1.19
GINS3-202ENST00000328514 ZNF469Q96JG9 3925 aaPredicted RBP7.6□□□□□ -1.19
GINS3-202ENST00000328514 MIFP14174 115 aa7.6□□□□□ -1.19
GINS3-202ENST00000328514 C10orf25Q5T742 122 aa7.6□□□□□ -1.19
GINS3-202ENST00000328514 DIRC1Q969H9 104 aa7.6□□□□□ -1.19
GINS3-202ENST00000328514 TM2D3Q9BRN9 247 aa7.6□□□□□ -1.19
GINS3-202ENST00000328514 UNQ6190/PRO20217Q6UXQ8 127 aa7.59□□□□□ -1.19
GINS3-202ENST00000328514 ANGP03950 147 aaKnown RBP7.58□□□□□ -1.2
GINS3-202ENST00000328514 SPAG11BQ08648 103 aa7.58□□□□□ -1.2
GINS3-202ENST00000328514 DEFB113Q30KQ7 82 aa7.58□□□□□ -1.2
GINS3-202ENST00000328514 X6R8D5 127 aa7.58□□□□□ -1.2
GINS3-202ENST00000328514 LYRM9A8MSI8 78 aa7.58□□□□□ -1.2
GINS3-202ENST00000328514 ELOF1P60002 83 aaKnown RBP7.58□□□□□ -1.2
GINS3-202ENST00000328514 NREPQ16612 68 aa7.58□□□□□ -1.2
GINS3-202ENST00000328514 IGLV10-54A0A075B6I4 117 aa7.57□□□□□ -1.2
GINS3-202ENST00000328514 COX7BP24311 80 aa7.57□□□□□ -1.2
GINS3-202ENST00000328514 TMEM254Q8TBM7 123 aa7.57□□□□□ -1.2
GINS3-202ENST00000328514 CELA1Q9UNI1 258 aa7.57□□□□□ -1.2
GINS3-202ENST00000328514 COL6A5A8TX70 2615 aa7.57□□□□□ -1.2
GINS3-202ENST00000328514 ZNF73O43830 326 aaPredicted RBP7.56□□□□□ -1.2
GINS3-202ENST00000328514 ESM1Q9NQ30 184 aa7.56□□□□□ -1.2
GINS3-202ENST00000328514 BPY2O14599 106 aa7.56□□□□□ -1.2
GINS3-202ENST00000328514 PRR34Q9NV39 138 aa7.56□□□□□ -1.2
GINS3-202ENST00000328514 ACANP16112 2415 aa7.55□□□□□ -1.2
GINS3-202ENST00000328514 A0A096LPF7 62 aa7.55□□□□□ -1.2
GINS3-202ENST00000328514 KRTAP1-3Q8IUG1 177 aa7.54□□□□□ -1.2
GINS3-202ENST00000328514 OCR1Q9BZK8 76 aa7.54□□□□□ -1.2
GINS3-202ENST00000328514 A0A0U1RQV1 116 aa7.53□□□□□ -1.2
GINS3-202ENST00000328514 CUBNO60494 3623 aa7.53□□□□□ -1.2
GINS3-202ENST00000328514 C6orf48Q9UBA6 75 aa7.52□□□□□ -1.2
GINS3-202ENST00000328514 IGKV4-1P06312 121 aa7.52□□□□□ -1.21
GINS3-202ENST00000328514 LELP1Q5T871 98 aa7.52□□□□□ -1.21
GINS3-202ENST00000328514 SCXQ7RTU7 201 aa7.52□□□□□ -1.21
GINS3-202ENST00000328514 LINC00528Q8N1L1 170 aa7.51□□□□□ -1.21
GINS3-202ENST00000328514 LINC00474Q9P2X8 69 aa7.51□□□□□ -1.21
GINS3-202ENST00000328514 NSD1Q96L73 2696 aaPredicted RBP7.51□□□□□ -1.21
GINS3-202ENST00000328514 SONP18583 2426 aaKnown RBP7.5□□□□□ -1.21
GINS3-202ENST00000328514 VPREB1P12018 145 aa7.5□□□□□ -1.21
GINS3-202ENST00000328514 SMR3AQ99954 134 aa7.5□□□□□ -1.21
GINS3-202ENST00000328514 M0R378 163 aa7.49□□□□□ -1.21
GINS3-202ENST00000328514 PRYO14603 147 aa7.49□□□□□ -1.21
GINS3-202ENST00000328514 A0A1B0GW54 56 aa7.48□□□□□ -1.21
GINS3-202ENST00000328514 XAGE1AQ9HD64 81 aa7.48□□□□□ -1.21
GINS3-202ENST00000328514 Q6ZTC4 211 aa7.48□□□□□ -1.21
GINS3-202ENST00000328514 NBEAL2Q6ZNJ1 2754 aa7.47□□□□□ -1.21
GINS3-202ENST00000328514 LCE6AA0A183 80 aa7.47□□□□□ -1.21
GINS3-202ENST00000328514 C1orf43Q9BWL3 253 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms