RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 LINC00575Q6W349 94 aa9.77□□□□□ -0.85
CHRNA3-201ENST00000326828 LINC00482Q8N8I6 264 aa9.77□□□□□ -0.85
CHRNA3-201ENST00000326828 HELZ2Q9BYK8 2649 aaKnown RBP9.77□□□□□ -0.85
CHRNA3-201ENST00000326828 KIAA0087Q14695 138 aa9.77□□□□□ -0.85
CHRNA3-201ENST00000326828 Q6ZVQ6 151 aa9.77□□□□□ -0.85
CHRNA3-201ENST00000326828 C19orf73Q9NVV2 129 aa9.77□□□□□ -0.85
CHRNA3-201ENST00000326828 Q6ZQT0 140 aa9.76□□□□□ -0.85
CHRNA3-201ENST00000326828 ATP5EP2Q5VTU8 51 aa9.75□□□□□ -0.85
CHRNA3-201ENST00000326828 NDUFC2O95298 119 aa9.75□□□□□ -0.85
CHRNA3-201ENST00000326828 Q8N9L7 120 aa9.75□□□□□ -0.85
CHRNA3-201ENST00000326828 SPAG11BQ08648 103 aa9.75□□□□□ -0.85
CHRNA3-201ENST00000326828 DEFB113Q30KQ7 82 aa9.75□□□□□ -0.85
CHRNA3-201ENST00000326828 CD164L2Q6UWJ8 174 aa9.74□□□□□ -0.85
CHRNA3-201ENST00000326828 F8WEM9 126 aa9.74□□□□□ -0.85
CHRNA3-201ENST00000326828 LINC00167Q96N53 147 aa9.74□□□□□ -0.85
CHRNA3-201ENST00000326828 PRO0255Q9UI72 69 aa9.74□□□□□ -0.85
CHRNA3-201ENST00000326828 IGLV1-51P01701 117 aa9.73□□□□□ -0.85
CHRNA3-201ENST00000326828 F8P00451 2351 aa9.73□□□□□ -0.85
CHRNA3-201ENST00000326828 ZNF561-AS1K7EIQ3 104 aa9.73□□□□□ -0.85
CHRNA3-201ENST00000326828 DEFB135Q30KP9 77 aa9.73□□□□□ -0.85
CHRNA3-201ENST00000326828 CYSRT1A8MQ03 144 aa9.72□□□□□ -0.85
CHRNA3-201ENST00000326828 H7BZZ5 65 aa9.72□□□□□ -0.85
CHRNA3-201ENST00000326828 KLK12Q9UKR0 248 aa9.72□□□□□ -0.85
CHRNA3-201ENST00000326828 TRBV10-3A0A0K0K1G6 114 aa9.72□□□□□ -0.85
CHRNA3-201ENST00000326828 TM2D3Q9BRN9 247 aa9.72□□□□□ -0.85
CHRNA3-201ENST00000326828 A0A1B0GUV1 79 aa9.71□□□□□ -0.86
CHRNA3-201ENST00000326828 TENM4Q6N022 2769 aa9.71□□□□□ -0.86
CHRNA3-201ENST00000326828 TEP1Q99973 2627 aaKnown RBP9.7□□□□□ -0.86
CHRNA3-201ENST00000326828 UBR5O95071 2799 aaPredicted RBP9.69□□□□□ -0.86
CHRNA3-201ENST00000326828 TRAV7A0A075B6U4 112 aa9.69□□□□□ -0.86
CHRNA3-201ENST00000326828 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.69□□□□□ -0.86
CHRNA3-201ENST00000326828 ATRQ13535 2644 aa9.69□□□□□ -0.86
CHRNA3-201ENST00000326828 PKD1L1Q8TDX9 2849 aa9.69□□□□□ -0.86
CHRNA3-201ENST00000326828 DAD1P61803 113 aa9.68□□□□□ -0.86
CHRNA3-201ENST00000326828 HIGD2BQ4VC39 106 aa9.68□□□□□ -0.86
CHRNA3-201ENST00000326828 LYPD5Q6UWN5 251 aa9.68□□□□□ -0.86
CHRNA3-201ENST00000326828 CMC4P56277 68 aaPredicted RBP9.67□□□□□ -0.86
CHRNA3-201ENST00000326828 COX17Q14061 63 aa9.67□□□□□ -0.86
CHRNA3-201ENST00000326828 LINC00474Q9P2X8 69 aa9.67□□□□□ -0.86
CHRNA3-201ENST00000326828 PDZD2O15018 2839 aa9.67□□□□□ -0.86
CHRNA3-201ENST00000326828 MUC7Q8TAX7 377 aa9.67□□□□□ -0.86
CHRNA3-201ENST00000326828 LINC00336Q6ZUF6 198 aa9.67□□□□□ -0.86
CHRNA3-201ENST00000326828 TENM1Q9UKZ4 2725 aa9.66□□□□□ -0.86
CHRNA3-201ENST00000326828 X6R8D5 127 aa9.65□□□□□ -0.86
CHRNA3-201ENST00000326828 DIRC1Q969H9 104 aa9.65□□□□□ -0.86
CHRNA3-201ENST00000326828 HIVEP1P15822 2718 aa9.65□□□□□ -0.87
CHRNA3-201ENST00000326828 DEFB105AQ8NG35 78 aa9.65□□□□□ -0.87
CHRNA3-201ENST00000326828 NDUFC2-KCTD14E9PQ53 114 aa9.63□□□□□ -0.87
CHRNA3-201ENST00000326828 MPLKIPQ8TAP9 179 aa9.63□□□□□ -0.87
CHRNA3-201ENST00000326828 C1orf43Q9BWL3 253 aa9.63□□□□□ -0.87
CHRNA3-201ENST00000326828 SERP1Q9Y6X1 66 aa9.63□□□□□ -0.87
CHRNA3-201ENST00000326828 C3orf84H3BNL1 204 aa9.63□□□□□ -0.87
CHRNA3-201ENST00000326828 PKIGQ9Y2B9 76 aa9.63□□□□□ -0.87
CHRNA3-201ENST00000326828 LOC110117498A0A087WWA1 95 aa9.63□□□□□ -0.87
CHRNA3-201ENST00000326828 CELA1Q9UNI1 258 aa9.63□□□□□ -0.87
CHRNA3-201ENST00000326828 ZNF73O43830 326 aaPredicted RBP9.62□□□□□ -0.87
CHRNA3-201ENST00000326828 IGHV4-28A0A0C4DH34 117 aa9.62□□□□□ -0.87
CHRNA3-201ENST00000326828 BPY2O14599 106 aa9.61□□□□□ -0.87
CHRNA3-201ENST00000326828 COX7BP24311 80 aa9.61□□□□□ -0.87
CHRNA3-201ENST00000326828 IGLV6-57P01721 117 aa9.61□□□□□ -0.87
CHRNA3-201ENST00000326828 C6orf48Q9UBA6 75 aa9.6□□□□□ -0.87
CHRNA3-201ENST00000326828 NREPQ16612 68 aa9.6□□□□□ -0.87
CHRNA3-201ENST00000326828 BAHCC1Q9P281 2608 aa9.6□□□□□ -0.87
CHRNA3-201ENST00000326828 KRTAP1-3Q8IUG1 177 aa9.6□□□□□ -0.87
CHRNA3-201ENST00000326828 A0A0U1RQV1 116 aa9.59□□□□□ -0.87
CHRNA3-201ENST00000326828 MIFP14174 115 aa9.59□□□□□ -0.87
CHRNA3-201ENST00000326828 KLKP1Q107X0 134 aa9.59□□□□□ -0.87
CHRNA3-201ENST00000326828 FP248Q71RG6 208 aaPredicted RBP9.59□□□□□ -0.87
CHRNA3-201ENST00000326828 TRBV7-6A0A0J9YX20 115 aa9.58□□□□□ -0.88
CHRNA3-201ENST00000326828 CAMK2N2Q96S95 79 aa9.58□□□□□ -0.88
CHRNA3-201ENST00000326828 BRK1Q8WUW1 75 aa9.57□□□□□ -0.88
CHRNA3-201ENST00000326828 WIPF1O43516 503 aa9.56□□□□□ -0.88
CHRNA3-201ENST00000326828 SMR3AQ99954 134 aa9.56□□□□□ -0.88
CHRNA3-201ENST00000326828 CXCL6P80162 114 aa9.56□□□□□ -0.88
CHRNA3-201ENST00000326828 TMEM254Q8TBM7 123 aa9.56□□□□□ -0.88
CHRNA3-201ENST00000326828 LRCOL1A6NCL2 159 aa9.56□□□□□ -0.88
CHRNA3-201ENST00000326828 LINC00612Q8N6U2 182 aa9.56□□□□□ -0.88
CHRNA3-201ENST00000326828 TRRAPQ9Y4A5 3859 aa9.55□□□□□ -0.88
CHRNA3-201ENST00000326828 PRB2P02812 416 aaPredicted RBP9.55□□□□□ -0.88
CHRNA3-201ENST00000326828 OTOGQ6ZRI0 2925 aa9.55□□□□□ -0.88
CHRNA3-201ENST00000326828 PDE6GP18545 87 aa9.54□□□□□ -0.88
CHRNA3-201ENST00000326828 MRAPQ8TCY5 172 aa9.54□□□□□ -0.88
CHRNA3-201ENST00000326828 SMIM26A0A096LP01 95 aa9.53□□□□□ -0.88
CHRNA3-201ENST00000326828 TRBV7-4A0A0J9YYF1 115 aa9.53□□□□□ -0.88
CHRNA3-201ENST00000326828 FAM229BQ4G0N7 80 aa9.53□□□□□ -0.88
CHRNA3-201ENST00000326828 A0A0J9YWU9 116 aa9.53□□□□□ -0.88
CHRNA3-201ENST00000326828 IGHV4-30-4P0DP06 118 aa9.53□□□□□ -0.88
CHRNA3-201ENST00000326828 KRTAP10-3P60369 221 aa9.53□□□□□ -0.88
CHRNA3-201ENST00000326828 C9orf66Q5T8R8 295 aa9.52□□□□□ -0.89
CHRNA3-201ENST00000326828 LYRM9A8MSI8 78 aa9.52□□□□□ -0.89
CHRNA3-201ENST00000326828 HIGD2AQ9BW72 106 aa9.52□□□□□ -0.89
CHRNA3-201ENST00000326828 ELOF1P60002 83 aaKnown RBP9.5□□□□□ -0.89
CHRNA3-201ENST00000326828 Q6ZRU5 148 aa9.5□□□□□ -0.89
CHRNA3-201ENST00000326828 FAM30AQ9NZY2 134 aa9.5□□□□□ -0.89
CHRNA3-201ENST00000326828 WFDC10BQ8IUB3 73 aa9.5□□□□□ -0.89
CHRNA3-201ENST00000326828 PRO0628Q9UI54 55 aa9.5□□□□□ -0.89
CHRNA3-201ENST00000326828 FLNBO75369 2602 aaKnown RBP9.49□□□□□ -0.89
CHRNA3-201ENST00000326828 LELP1Q5T871 98 aa9.49□□□□□ -0.89
CHRNA3-201ENST00000326828 C16orf95Q9H693 158 aa9.48□□□□□ -0.89
CHRNA3-201ENST00000326828 VPREB1P12018 145 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms