RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 FAM168BA1KXE4 195 aa9.78□□□□□ -0.84
PRPF3-201ENST00000324862 BATFQ16520 125 aa9.78□□□□□ -0.84
PRPF3-201ENST00000324862 SDIM1Q6ZPB5 146 aa9.78□□□□□ -0.84
PRPF3-201ENST00000324862 LRP1BQ9NZR2 4599 aa9.78□□□□□ -0.84
PRPF3-201ENST00000324862 TLX1NBP0CAT3 122 aa9.77□□□□□ -0.84
PRPF3-201ENST00000324862 BVES-AS1Q5T3Y7 98 aa9.77□□□□□ -0.84
PRPF3-201ENST00000324862 DNAH8Q96JB1 4490 aa9.77□□□□□ -0.84
PRPF3-201ENST00000324862 DYNC1H1Q14204 4646 aaKnown RBP9.77□□□□□ -0.85
PRPF3-201ENST00000324862 LOC107984640A0A0U1RRK4 108 aa9.77□□□□□ -0.85
PRPF3-201ENST00000324862 A4D1N5 150 aa9.77□□□□□ -0.85
PRPF3-201ENST00000324862 PTTG1IPP53801 180 aa9.75□□□□□ -0.85
PRPF3-201ENST00000324862 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.75□□□□□ -0.85
PRPF3-201ENST00000324862 SERTAD4-AS1Q5TG53 156 aa9.75□□□□□ -0.85
PRPF3-201ENST00000324862 LINC00336Q6ZUF6 198 aa9.75□□□□□ -0.85
PRPF3-201ENST00000324862 KRTAP7-1Q8IUC3 87 aa9.75□□□□□ -0.85
PRPF3-201ENST00000324862 A0A1B0GVY2 172 aa9.74□□□□□ -0.85
PRPF3-201ENST00000324862 K7ERJ3 54 aa9.74□□□□□ -0.85
PRPF3-201ENST00000324862 TAL2Q16559 108 aa9.74□□□□□ -0.85
PRPF3-201ENST00000324862 Q6ZVH6 145 aa9.74□□□□□ -0.85
PRPF3-201ENST00000324862 SNHG12Q9BXW3 62 aa9.74□□□□□ -0.85
PRPF3-201ENST00000324862 C16orf90A8MZG2 172 aa9.73□□□□□ -0.85
PRPF3-201ENST00000324862 IFITM1P13164 125 aa9.73□□□□□ -0.85
PRPF3-201ENST00000324862 IGKV2-28A0A075B6P5 120 aa9.72□□□□□ -0.85
PRPF3-201ENST00000324862 IGKV2D-28P01615 120 aa9.72□□□□□ -0.85
PRPF3-201ENST00000324862 NHP2Q9NX24 153 aaKnown RBP9.72□□□□□ -0.85
PRPF3-201ENST00000324862 A0A1W2PNN7 141 aa9.72□□□□□ -0.85
PRPF3-201ENST00000324862 NCR3O14931 201 aa9.72□□□□□ -0.85
PRPF3-201ENST00000324862 KRTAP10-1P60331 282 aa9.72□□□□□ -0.85
PRPF3-201ENST00000324862 FAM30AQ9NZY2 134 aa9.72□□□□□ -0.85
PRPF3-201ENST00000324862 EPPK1P58107 5090 aaKnown RBP9.72□□□□□ -0.85
PRPF3-201ENST00000324862 HAMPP81172 84 aa9.71□□□□□ -0.85
PRPF3-201ENST00000324862 RPL24P83731 157 aaKnown RBP9.71□□□□□ -0.85
PRPF3-201ENST00000324862 FAM19A5Q7Z5A7 132 aaPredicted RBP9.71□□□□□ -0.85
PRPF3-201ENST00000324862 LOC107984156A0A0G2JMH3 177 aa9.71□□□□□ -0.86
PRPF3-201ENST00000324862 CFC1BP0CG36 223 aa9.71□□□□□ -0.86
PRPF3-201ENST00000324862 CFC1P0CG37 223 aa9.71□□□□□ -0.86
PRPF3-201ENST00000324862 ARL17AQ8IVW1 177 aa9.71□□□□□ -0.86
PRPF3-201ENST00000324862 PGPEP1Q9NXJ5 209 aa9.71□□□□□ -0.86
PRPF3-201ENST00000324862 VPREB1P12018 145 aa9.7□□□□□ -0.86
PRPF3-201ENST00000324862 LINC00337Q8N6G1 96 aa9.69□□□□□ -0.86
PRPF3-201ENST00000324862 DPH3Q96FX2 82 aa9.68□□□□□ -0.86
PRPF3-201ENST00000324862 GAGE10A6NGK3 116 aa9.68□□□□□ -0.86
PRPF3-201ENST00000324862 M0R143 59 aa9.68□□□□□ -0.86
PRPF3-201ENST00000324862 SPACA4Q8TDM5 124 aa9.67□□□□□ -0.86
PRPF3-201ENST00000324862 RAB37Q96AX2 223 aa9.67□□□□□ -0.86
PRPF3-201ENST00000324862 H7C2G1 150 aa9.66□□□□□ -0.86
PRPF3-201ENST00000324862 A0A087WYN8 130 aa9.65□□□□□ -0.86
PRPF3-201ENST00000324862 TMEM238LA0A1B0GVL6 79 aa9.65□□□□□ -0.86
PRPF3-201ENST00000324862 A6NJY4 79 aa9.65□□□□□ -0.86
PRPF3-201ENST00000324862 COPS9Q8WXC6 57 aa9.65□□□□□ -0.86
PRPF3-201ENST00000324862 A6NDN8 102 aa9.64□□□□□ -0.87
PRPF3-201ENST00000324862 NDUFC2O95298 119 aa9.64□□□□□ -0.87
PRPF3-201ENST00000324862 NAA38Q9BRA0 125 aaKnown RBP9.64□□□□□ -0.87
PRPF3-201ENST00000324862 C22orf24Q9Y442 160 aa9.64□□□□□ -0.87
PRPF3-201ENST00000324862 APOBP04114 4563 aaKnown RBP9.64□□□□□ -0.87
PRPF3-201ENST00000324862 OR13C6PQ8NH95 151 aa9.64□□□□□ -0.87
PRPF3-201ENST00000324862 PPDPFQ9H3Y8 114 aa9.63□□□□□ -0.87
PRPF3-201ENST00000324862 RPL37AP8A6NKH3 93 aa9.63□□□□□ -0.87
PRPF3-201ENST00000324862 PHF5AQ7RTV0 110 aaKnown RBP9.63□□□□□ -0.87
PRPF3-201ENST00000324862 C7orf33Q8WU49 177 aa9.63□□□□□ -0.87
PRPF3-201ENST00000324862 A0A1B0GWB2 263 aa9.62□□□□□ -0.87
PRPF3-201ENST00000324862 M0QXV9 152 aa9.62□□□□□ -0.87
PRPF3-201ENST00000324862 NKAPP1Q8N9T2 125 aa9.62□□□□□ -0.87
PRPF3-201ENST00000324862 RPL13AP40429 203 aaKnown RBP9.62□□□□□ -0.87
PRPF3-201ENST00000324862 A0A0B4J2C4 111 aa9.61□□□□□ -0.87
PRPF3-201ENST00000324862 TRBV10-3A0A0K0K1G6 114 aa9.61□□□□□ -0.87
PRPF3-201ENST00000324862 KRTAP11-1Q8IUC1 163 aa9.61□□□□□ -0.87
PRPF3-201ENST00000324862 LINC00474Q9P2X8 69 aa9.61□□□□□ -0.87
PRPF3-201ENST00000324862 PLA2G2DQ9UNK4 145 aa9.61□□□□□ -0.87
PRPF3-201ENST00000324862 LINC00167Q96N53 147 aa9.61□□□□□ -0.87
PRPF3-201ENST00000324862 PRO1854Q9UHT4 67 aa9.61□□□□□ -0.87
PRPF3-201ENST00000324862 CIRBP-AS1Q8TBR5 109 aa9.6□□□□□ -0.87
PRPF3-201ENST00000324862 S100A7L2Q5SY68 101 aa9.6□□□□□ -0.87
PRPF3-201ENST00000324862 MRPL55Q7Z7F7 128 aaKnown RBP9.6□□□□□ -0.87
PRPF3-201ENST00000324862 Q6ZSA8 131 aa9.59□□□□□ -0.87
PRPF3-201ENST00000324862 SCXQ7RTU7 201 aa9.59□□□□□ -0.87
PRPF3-201ENST00000324862 M0R378 163 aa9.58□□□□□ -0.88
PRPF3-201ENST00000324862 PKIGQ9Y2B9 76 aa9.58□□□□□ -0.88
PRPF3-201ENST00000324862 IGLV5-37A0A075B6J1 123 aa9.58□□□□□ -0.88
PRPF3-201ENST00000324862 TAX1BP3O14907 124 aa9.58□□□□□ -0.88
PRPF3-201ENST00000324862 TSPAN13O95857 204 aa9.58□□□□□ -0.88
PRPF3-201ENST00000324862 IGLV6-57P01721 117 aa9.57□□□□□ -0.88
PRPF3-201ENST00000324862 TRAV13-2A0A0B4J235 113 aa9.57□□□□□ -0.88
PRPF3-201ENST00000324862 TRBV10-2A0A0K0K1G8 114 aa9.57□□□□□ -0.88
PRPF3-201ENST00000324862 Q1RN00 199 aa9.56□□□□□ -0.88
PRPF3-201ENST00000324862 PLAC8Q9NZF1 115 aa9.56□□□□□ -0.88
PRPF3-201ENST00000324862 COL5A1-AS1Q5SY13 56 aa9.56□□□□□ -0.88
PRPF3-201ENST00000324862 SMIM11BQ8TCY0 68 aa9.56□□□□□ -0.88
PRPF3-201ENST00000324862 TMEM126AQ9H061 195 aa9.55□□□□□ -0.88
PRPF3-201ENST00000324862 FAT1Q14517 4588 aa9.55□□□□□ -0.88
PRPF3-201ENST00000324862 IGLV1-50A0A075B6I6 118 aa9.54□□□□□ -0.88
PRPF3-201ENST00000324862 EPM2AB3EWF7 344 aa9.54□□□□□ -0.88
PRPF3-201ENST00000324862 H3BUT2 72 aa9.53□□□□□ -0.88
PRPF3-201ENST00000324862 UBE2BP63146 152 aa9.53□□□□□ -0.88
PRPF3-201ENST00000324862 VPS13BQ7Z7G8 4022 aa9.52□□□□□ -0.88
PRPF3-201ENST00000324862 TRAV23DV6A0A075B6W5 121 aa9.52□□□□□ -0.89
PRPF3-201ENST00000324862 TRIAP1O43715 76 aa9.52□□□□□ -0.89
PRPF3-201ENST00000324862 XGP55808 180 aa9.52□□□□□ -0.89
PRPF3-201ENST00000324862 C6orf99Q4VX62 202 aa9.51□□□□□ -0.89
PRPF3-201ENST00000324862 KIAA1109Q2LD37 5005 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms