RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 LINC00588Q9Y4M8 146 aa8.66□□□□□ -1.02
DDX39A-202ENST00000324340 IGHV3-64A0A075B6Q5 118 aa8.65□□□□□ -1.02
DDX39A-202ENST00000324340 TRAV13-2A0A0B4J235 113 aa8.65□□□□□ -1.02
DDX39A-202ENST00000324340 hADV29S1A0JD25 119 aa8.65□□□□□ -1.02
DDX39A-202ENST00000324340 MALP21145 153 aa8.65□□□□□ -1.02
DDX39A-202ENST00000324340 RPL28P46779 137 aaKnown RBP8.65□□□□□ -1.02
DDX39A-202ENST00000324340 LINC00242Q5T6M2 205 aa8.65□□□□□ -1.02
DDX39A-202ENST00000324340 Q8N3U1 123 aa8.65□□□□□ -1.02
DDX39A-202ENST00000324340 STAB2Q8WWQ8 2551 aa8.65□□□□□ -1.02
DDX39A-202ENST00000324340 H0YGX0 51 aa8.64□□□□□ -1.03
DDX39A-202ENST00000324340 LINC01556Q5JQF7 62 aa8.64□□□□□ -1.03
DDX39A-202ENST00000324340 PRR34Q9NV39 138 aa8.64□□□□□ -1.03
DDX39A-202ENST00000324340 TRAV13-1A0A0B4J241 112 aa8.63□□□□□ -1.03
DDX39A-202ENST00000324340 DNAL4O96015 105 aa8.63□□□□□ -1.03
DDX39A-202ENST00000324340 ANGP03950 147 aaKnown RBP8.63□□□□□ -1.03
DDX39A-202ENST00000324340 DNAH10OSP0CZ25 163 aa8.63□□□□□ -1.03
DDX39A-202ENST00000324340 C22orf24Q9Y442 160 aa8.63□□□□□ -1.03
DDX39A-202ENST00000324340 TRBV10-3A0A0K0K1G6 114 aa8.62□□□□□ -1.03
DDX39A-202ENST00000324340 LINC00959A0A1B0GUT2 108 aa8.62□□□□□ -1.03
DDX39A-202ENST00000324340 REG3AQ06141 175 aa8.62□□□□□ -1.03
DDX39A-202ENST00000324340 LINC00269Q8N2A0 174 aa8.62□□□□□ -1.03
DDX39A-202ENST00000324340 EPM2AB3EWF7 344 aa8.61□□□□□ -1.03
DDX39A-202ENST00000324340 COX6A2Q02221 97 aa8.61□□□□□ -1.03
DDX39A-202ENST00000324340 KLK12Q9UKR0 248 aa8.61□□□□□ -1.03
DDX39A-202ENST00000324340 SS18Q15532 418 aa8.6□□□□□ -1.03
DDX39A-202ENST00000324340 ENHOQ6UWT2 76 aa8.6□□□□□ -1.03
DDX39A-202ENST00000324340 MUC7Q8TAX7 377 aa8.6□□□□□ -1.03
DDX39A-202ENST00000324340 WWC2-AS2Q96NR7 200 aa8.6□□□□□ -1.03
DDX39A-202ENST00000324340 CDKN2A-AS1Q9UH64 79 aa8.6□□□□□ -1.03
DDX39A-202ENST00000324340 IGHV3OR16-9A0A0B4J2B5 98 aa8.59□□□□□ -1.03
DDX39A-202ENST00000324340 IGKV3OR2-268A0A0C4DH90 116 aa8.59□□□□□ -1.03
DDX39A-202ENST00000324340 USP17L23D6RBM5 183 aa8.59□□□□□ -1.03
DDX39A-202ENST00000324340 Q5XG85 94 aa8.59□□□□□ -1.03
DDX39A-202ENST00000324340 CLPSL2Q6UWE3 100 aa8.59□□□□□ -1.03
DDX39A-202ENST00000324340 CD164L2Q6UWJ8 174 aa8.57□□□□□ -1.04
DDX39A-202ENST00000324340 CHCHD10Q8WYQ3 142 aaPredicted RBP8.57□□□□□ -1.04
DDX39A-202ENST00000324340 ZNF625Q96I27 306 aaPredicted RBP8.57□□□□□ -1.04
DDX39A-202ENST00000324340 Q9H8V8 135 aa8.57□□□□□ -1.04
DDX39A-202ENST00000324340 A0A087WZ39 114 aa8.56□□□□□ -1.04
DDX39A-202ENST00000324340 CRPP02741 224 aa8.56□□□□□ -1.04
DDX39A-202ENST00000324340 LINC01561Q8N1V8 128 aa8.56□□□□□ -1.04
DDX39A-202ENST00000324340 PRO0628Q9UI54 55 aa8.56□□□□□ -1.04
DDX39A-202ENST00000324340 SERP1Q9Y6X1 66 aa8.56□□□□□ -1.04
DDX39A-202ENST00000324340 IBA57-AS1B1ANH7 110 aa8.55□□□□□ -1.04
DDX39A-202ENST00000324340 SMIM1B2RUZ4 78 aa8.55□□□□□ -1.04
DDX39A-202ENST00000324340 XCL1P47992 114 aa8.55□□□□□ -1.04
DDX39A-202ENST00000324340 NPC2P61916 151 aa8.55□□□□□ -1.04
DDX39A-202ENST00000324340 UBE2DNLQ8IWF7 75 aa8.55□□□□□ -1.04
DDX39A-202ENST00000324340 DYNC2H1Q8NCM8 4307 aaKnown RBP8.55□□□□□ -1.04
DDX39A-202ENST00000324340 IGLV10-54A0A075B6I4 117 aa8.53□□□□□ -1.04
DDX39A-202ENST00000324340 JMJD7-PLA2G4BH0Y9G9 81 aa8.53□□□□□ -1.04
DDX39A-202ENST00000324340 CCKP06307 115 aa8.53□□□□□ -1.04
DDX39A-202ENST00000324340 KRTAP26-1Q6PEX3 210 aa8.53□□□□□ -1.04
DDX39A-202ENST00000324340 SOSTDC1Q6X4U4 206 aa8.53□□□□□ -1.04
DDX39A-202ENST00000324340 FAM218AQ96MZ4 157 aa8.53□□□□□ -1.04
DDX39A-202ENST00000324340 OXTP01178 125 aa8.51□□□□□ -1.05
DDX39A-202ENST00000324340 ATP5EP56381 51 aaPredicted RBP8.51□□□□□ -1.05
DDX39A-202ENST00000324340 DSCR8Q96T75 97 aa8.51□□□□□ -1.05
DDX39A-202ENST00000324340 LINC00846Q9NV44 126 aa8.51□□□□□ -1.05
DDX39A-202ENST00000324340 DNAH7Q8WXX0 4024 aa8.5□□□□□ -1.05
DDX39A-202ENST00000324340 FAM236DA0A1B0GTK5 79 aa8.5□□□□□ -1.05
DDX39A-202ENST00000324340 C3orf84H3BNL1 204 aa8.5□□□□□ -1.05
DDX39A-202ENST00000324340 FAM236CP0DP71 79 aa8.5□□□□□ -1.05
DDX39A-202ENST00000324340 C4orf26Q17RF5 130 aa8.5□□□□□ -1.05
DDX39A-202ENST00000324340 CASC10Q5T4H9 136 aa8.5□□□□□ -1.05
DDX39A-202ENST00000324340 LINC00167Q96N53 147 aa8.5□□□□□ -1.05
DDX39A-202ENST00000324340 CSMD3Q7Z407 3707 aa8.5□□□□□ -1.05
DDX39A-202ENST00000324340 C1orf43Q9BWL3 253 aa8.49□□□□□ -1.05
DDX39A-202ENST00000324340 KRTAP1-5Q9BYS1 174 aa8.49□□□□□ -1.05
DDX39A-202ENST00000324340 CYSTM1Q9H1C7 97 aa8.49□□□□□ -1.05
DDX39A-202ENST00000324340 F8WDY8 70 aa8.48□□□□□ -1.05
DDX39A-202ENST00000324340 NDUFC1O43677 76 aa8.48□□□□□ -1.05
DDX39A-202ENST00000324340 HRCT1Q6UXD1 115 aa8.48□□□□□ -1.05
DDX39A-202ENST00000324340 TRAV7A0A075B6U4 112 aa8.48□□□□□ -1.05
DDX39A-202ENST00000324340 SMIM26A0A096LP01 95 aa8.48□□□□□ -1.05
DDX39A-202ENST00000324340 IGKV3D-7A0A0C4DH55 119 aa8.48□□□□□ -1.05
DDX39A-202ENST00000324340 RMI2Q96E14 147 aa8.48□□□□□ -1.05
DDX39A-202ENST00000324340 ORMDL1Q9P0S3 153 aa8.48□□□□□ -1.05
DDX39A-202ENST00000324340 IGKV2D-24A0A075B6R9 120 aa8.47□□□□□ -1.05
DDX39A-202ENST00000324340 GHRHP01286 108 aa8.47□□□□□ -1.05
DDX39A-202ENST00000324340 PFN2P35080 140 aa8.47□□□□□ -1.05
DDX39A-202ENST00000324340 Q8IZM0 81 aa8.47□□□□□ -1.05
DDX39A-202ENST00000324340 COX7B2Q8TF08 81 aa8.47□□□□□ -1.05
DDX39A-202ENST00000324340 C14orf132Q9NPU4 83 aa8.47□□□□□ -1.05
DDX39A-202ENST00000324340 NBDYA0A0U1RRE5 68 aa8.46□□□□□ -1.06
DDX39A-202ENST00000324340 KLKP1Q107X0 134 aa8.46□□□□□ -1.06
DDX39A-202ENST00000324340 KIAA0087Q14695 138 aa8.46□□□□□ -1.06
DDX39A-202ENST00000324340 SMIM11BQ8TCY0 68 aa8.46□□□□□ -1.06
DDX39A-202ENST00000324340 Q9HAA7 133 aa8.46□□□□□ -1.06
DDX39A-202ENST00000324340 H3BQ85 93 aa8.45□□□□□ -1.06
DDX39A-202ENST00000324340 SND1-IT1Q9HBX3 110 aa8.45□□□□□ -1.06
DDX39A-202ENST00000324340 STARD9Q9P2P6 4700 aa8.44□□□□□ -1.06
DDX39A-202ENST00000324340 LINC00337Q8N6G1 96 aa8.44□□□□□ -1.06
DDX39A-202ENST00000324340 IGKV2-28A0A075B6P5 120 aa8.43□□□□□ -1.06
DDX39A-202ENST00000324340 TMEM256-PLSCR3K7ERE1 68 aa8.43□□□□□ -1.06
DDX39A-202ENST00000324340 IGKV2D-28P01615 120 aa8.43□□□□□ -1.06
DDX39A-202ENST00000324340 UBL5Q9BZL1 73 aa8.43□□□□□ -1.06
DDX39A-202ENST00000324340 TOMM7Q9P0U1 55 aa8.43□□□□□ -1.06
DDX39A-202ENST00000324340 A0A087WYN8 130 aa8.42□□□□□ -1.06
DDX39A-202ENST00000324340 C6orf226Q5I0X4 101 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms