RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 BAGE3Q86Y29 109 aa7.15□□□□□ -1.26
TPM3-204ENST00000323144 A0A0U1RRA0 63 aa7.14□□□□□ -1.27
TPM3-204ENST00000323144 IGKV2D-26A0A0A0MRZ7 120 aa7.13□□□□□ -1.27
TPM3-204ENST00000323144 RPL24P83731 157 aaKnown RBP7.13□□□□□ -1.27
TPM3-204ENST00000323144 COX17Q14061 63 aa7.13□□□□□ -1.27
TPM3-204ENST00000323144 HIGD2AQ9BW72 106 aa7.13□□□□□ -1.27
TPM3-204ENST00000323144 CHTOPQ9Y3Y2 248 aaKnown RBP7.13□□□□□ -1.27
TPM3-204ENST00000323144 MUC17Q685J3 4493 aa7.12□□□□□ -1.27
TPM3-204ENST00000323144 TMEM223A0PJW6 202 aa7.12□□□□□ -1.27
TPM3-204ENST00000323144 NCR3O14931 201 aa7.12□□□□□ -1.27
TPM3-204ENST00000323144 APOC3P02656 99 aa7.12□□□□□ -1.27
TPM3-204ENST00000323144 LINC00158P58513 81 aa7.11□□□□□ -1.27
TPM3-204ENST00000323144 NDUFA5Q16718 116 aa7.11□□□□□ -1.27
TPM3-204ENST00000323144 CBLN2Q8IUK8 224 aa7.11□□□□□ -1.27
TPM3-204ENST00000323144 PLEKHB2Q96CS7 222 aa7.11□□□□□ -1.27
TPM3-204ENST00000323144 YPEL4Q96NS1 127 aa7.11□□□□□ -1.27
TPM3-204ENST00000323144 LCE2BO14633 110 aa7.1□□□□□ -1.27
TPM3-204ENST00000323144 SMIM13P0DJ93 91 aa7.1□□□□□ -1.27
TPM3-204ENST00000323144 SFTA2Q6UW10 78 aa7.1□□□□□ -1.27
TPM3-204ENST00000323144 SPRR4Q96PI1 79 aa7.1□□□□□ -1.27
TPM3-204ENST00000323144 TPRXLQ17RH7 258 aa7.09□□□□□ -1.27
TPM3-204ENST00000323144 IFI27L1Q96BM0 104 aa7.09□□□□□ -1.27
TPM3-204ENST00000323144 TRAV12-1A0A0B4J245 112 aa7.08□□□□□ -1.28
TPM3-204ENST00000323144 TSPEAR-AS2P59090 65 aa7.08□□□□□ -1.28
TPM3-204ENST00000323144 IGLV7-46A0A075B6I9 117 aa7.07□□□□□ -1.28
TPM3-204ENST00000323144 A0A0U1RQV1 116 aa7.07□□□□□ -1.28
TPM3-204ENST00000323144 PRYO14603 147 aa7.07□□□□□ -1.28
TPM3-204ENST00000323144 SNAPINO95295 136 aa7.07□□□□□ -1.28
TPM3-204ENST00000323144 MEIG1Q5JSS6 88 aa7.07□□□□□ -1.28
TPM3-204ENST00000323144 BOD1L2Q8IYS8 172 aa7.07□□□□□ -1.28
TPM3-204ENST00000323144 SVBPQ8N300 66 aa7.07□□□□□ -1.28
TPM3-204ENST00000323144 MIR7-3HGQ8N6C7 128 aa7.07□□□□□ -1.28
TPM3-204ENST00000323144 CHCHD1Q96BP2 118 aaKnown RBP7.07□□□□□ -1.28
TPM3-204ENST00000323144 FAT4Q6V0I7 4981 aa7.07□□□□□ -1.28
TPM3-204ENST00000323144 H0Y8G0 127 aa7.06□□□□□ -1.28
TPM3-204ENST00000323144 LCE2AQ5TA79 106 aaPredicted RBP7.06□□□□□ -1.28
TPM3-204ENST00000323144 FAM19A2Q8N3H0 131 aa7.06□□□□□ -1.28
TPM3-204ENST00000323144 SPRR1AP35321 89 aa7.05□□□□□ -1.28
TPM3-204ENST00000323144 LINC00310P59036 64 aa7.05□□□□□ -1.28
TPM3-204ENST00000323144 DAND5Q8N907 189 aa7.05□□□□□ -1.28
TPM3-204ENST00000323144 CDIP1Q9H305 208 aa7.05□□□□□ -1.28
TPM3-204ENST00000323144 TRBV10-3A0A0K0K1G6 114 aa7.04□□□□□ -1.28
TPM3-204ENST00000323144 KRTAP4-16G5E9R7 235 aaPredicted RBP7.04□□□□□ -1.28
TPM3-204ENST00000323144 Q8NBF4 154 aa7.04□□□□□ -1.28
TPM3-204ENST00000323144 SMCR5Q8TEV8 140 aa7.04□□□□□ -1.28
TPM3-204ENST00000323144 PPDPFQ9H3Y8 114 aa7.04□□□□□ -1.28
TPM3-204ENST00000323144 NDUFA12Q9UI09 145 aa7.04□□□□□ -1.28
TPM3-204ENST00000323144 HSBP1O75506 76 aa7.03□□□□□ -1.28
TPM3-204ENST00000323144 LINC00337Q8N6G1 96 aa7.03□□□□□ -1.28
TPM3-204ENST00000323144 ZNF706Q9Y5V0 76 aaPredicted RBP7.03□□□□□ -1.28
TPM3-204ENST00000323144 HERV-K104P63124 156 aa7.02□□□□□ -1.29
TPM3-204ENST00000323144 SLC7A5P1Q8MH63 180 aa7.02□□□□□ -1.29
TPM3-204ENST00000323144 KCNQ1DNQ9H478 68 aa7.02□□□□□ -1.29
TPM3-204ENST00000323144 ETDCA0A1B0GVM5 59 aa7.01□□□□□ -1.29
TPM3-204ENST00000323144 ATP6V1G1O75348 118 aa7.01□□□□□ -1.29
TPM3-204ENST00000323144 KRTAP9-2Q9BYQ4 174 aa7.01□□□□□ -1.29
TPM3-204ENST00000323144 SERF1AO75920 110 aa7□□□□□ -1.29
TPM3-204ENST00000323144 ERC2-IT1O76042 136 aa7□□□□□ -1.29
TPM3-204ENST00000323144 PMCHL2Q9BQD1 86 aa7□□□□□ -1.29
TPM3-204ENST00000323144 MYMXA0A1B0GTQ4 84 aa6.99□□□□□ -1.29
TPM3-204ENST00000323144 S100A1P23297 94 aa6.99□□□□□ -1.29
TPM3-204ENST00000323144 MOBPQ13875 183 aa6.99□□□□□ -1.29
TPM3-204ENST00000323144 LINC00483Q53H64 154 aa6.99□□□□□ -1.29
TPM3-204ENST00000323144 B5MCH6 92 aa6.98□□□□□ -1.29
TPM3-204ENST00000323144 LEPROTO15243 131 aa6.98□□□□□ -1.29
TPM3-204ENST00000323144 TRGC2P03986 189 aa6.98□□□□□ -1.29
TPM3-204ENST00000323144 CTAG1AP78358 180 aa6.98□□□□□ -1.29
TPM3-204ENST00000323144 KRTAP13-3Q3SY46 172 aa6.98□□□□□ -1.29
TPM3-204ENST00000323144 SPAG11AQ6PDA7 123 aa6.98□□□□□ -1.29
TPM3-204ENST00000323144 Q9BRP9 147 aa6.98□□□□□ -1.29
TPM3-204ENST00000323144 IGLV9-49A0A0B4J1Y8 123 aa6.97□□□□□ -1.29
TPM3-204ENST00000323144 LEPROTL1O95214 131 aa6.97□□□□□ -1.29
TPM3-204ENST00000323144 DDTP30046 118 aa6.97□□□□□ -1.29
TPM3-204ENST00000323144 GAGE2AQ6NT46 116 aa6.97□□□□□ -1.29
TPM3-204ENST00000323144 FP248Q71RG6 208 aaPredicted RBP6.97□□□□□ -1.29
TPM3-204ENST00000323144 J3QQQ9 107 aa6.96□□□□□ -1.3
TPM3-204ENST00000323144 EIF4EBP3O60516 100 aaPredicted RBP6.96□□□□□ -1.3
TPM3-204ENST00000323144 MAP1LC3CQ9BXW4 147 aa6.96□□□□□ -1.3
TPM3-204ENST00000323144 PLNP26678 52 aa6.95□□□□□ -1.3
TPM3-204ENST00000323144 NPC2P61916 151 aa6.95□□□□□ -1.3
TPM3-204ENST00000323144 SOSTDC1Q6X4U4 206 aa6.95□□□□□ -1.3
TPM3-204ENST00000323144 Q6ZRX8 168 aa6.95□□□□□ -1.3
TPM3-204ENST00000323144 SPANXB1Q9NS25 103 aaPredicted RBP6.95□□□□□ -1.3
TPM3-204ENST00000323144 DPM2O94777 84 aa6.94□□□□□ -1.3
TPM3-204ENST00000323144 FABP4P15090 132 aa6.94□□□□□ -1.3
TPM3-204ENST00000323144 C4orf48Q5BLP8 95 aa6.94□□□□□ -1.3
TPM3-204ENST00000323144 LOC107984156A0A0G2JMH3 177 aa6.93□□□□□ -1.3
TPM3-204ENST00000323144 TRBV10-2A0A0K0K1G8 114 aa6.93□□□□□ -1.3
TPM3-204ENST00000323144 LINC00587B1AMM8 73 aa6.93□□□□□ -1.3
TPM3-204ENST00000323144 ARL17AQ8IVW1 177 aa6.93□□□□□ -1.3
TPM3-204ENST00000323144 KRTAP4-1Q9BYQ7 146 aa6.93□□□□□ -1.3
TPM3-204ENST00000323144 TRAV23DV6A0A075B6W5 121 aa6.92□□□□□ -1.3
TPM3-204ENST00000323144 SPINK1P00995 79 aa6.92□□□□□ -1.3
TPM3-204ENST00000323144 IGLV6-57P01721 117 aa6.92□□□□□ -1.3
TPM3-204ENST00000323144 IGKCP01834 107 aa6.92□□□□□ -1.3
TPM3-204ENST00000323144 LGALS3P17931 250 aaKnown RBP6.92□□□□□ -1.3
TPM3-204ENST00000323144 HERVK_113P61574 105 aa6.92□□□□□ -1.3
TPM3-204ENST00000323144 Q8N377 158 aa6.92□□□□□ -1.3
TPM3-204ENST00000323144 MIEN1Q9BRT3 115 aa6.92□□□□□ -1.3
TPM3-204ENST00000323144 NMUP48645 174 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 222.5 ms