RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 CITED1Q99966 193 aa7.62□□□□□ -1.19
TOP3A-201ENST00000321105 RBM3P98179 157 aaKnown RBP7.62□□□□□ -1.19
TOP3A-201ENST00000321105 C10orf25Q5T742 122 aa7.62□□□□□ -1.19
TOP3A-201ENST00000321105 COX7BP24311 80 aa7.61□□□□□ -1.19
TOP3A-201ENST00000321105 C9orf153Q5TBE3 101 aa7.61□□□□□ -1.19
TOP3A-201ENST00000321105 OTOGQ6ZRI0 2925 aa7.61□□□□□ -1.19
TOP3A-201ENST00000321105 ESRGQ1W209 222 aa7.6□□□□□ -1.19
TOP3A-201ENST00000321105 PLAC8L1A1L4L8 177 aa7.6□□□□□ -1.19
TOP3A-201ENST00000321105 IGLV5-39A0A0G2JS06 123 aa7.6□□□□□ -1.19
TOP3A-201ENST00000321105 SMCPP49901 116 aaPredicted RBP7.6□□□□□ -1.19
TOP3A-201ENST00000321105 TRBV10-3A0A0K0K1G6 114 aa7.59□□□□□ -1.19
TOP3A-201ENST00000321105 Q8NAQ8 132 aa7.59□□□□□ -1.19
TOP3A-201ENST00000321105 TENM1Q9UKZ4 2725 aa7.59□□□□□ -1.19
TOP3A-201ENST00000321105 A0A1B0GUV1 79 aa7.58□□□□□ -1.2
TOP3A-201ENST00000321105 TMEM256-PLSCR3K7ERE1 68 aa7.58□□□□□ -1.2
TOP3A-201ENST00000321105 VWFP04275 2813 aa7.58□□□□□ -1.2
TOP3A-201ENST00000321105 WFDC9Q8NEX5 89 aa7.58□□□□□ -1.2
TOP3A-201ENST00000321105 PPDPFQ9H3Y8 114 aa7.58□□□□□ -1.2
TOP3A-201ENST00000321105 BSNQ9UPA5 3926 aa7.58□□□□□ -1.2
TOP3A-201ENST00000321105 TRAV23DV6A0A075B6W5 121 aa7.57□□□□□ -1.2
TOP3A-201ENST00000321105 SS18L2Q9UHA2 77 aa7.57□□□□□ -1.2
TOP3A-201ENST00000321105 Q6ZRU5 148 aa7.57□□□□□ -1.2
TOP3A-201ENST00000321105 C3orf84H3BNL1 204 aa7.56□□□□□ -1.2
TOP3A-201ENST00000321105 A0A1B0GX51 115 aa7.56□□□□□ -1.2
TOP3A-201ENST00000321105 KRTAP10-11P60412 298 aa7.56□□□□□ -1.2
TOP3A-201ENST00000321105 USP17L23D6RBM5 183 aa7.55□□□□□ -1.2
TOP3A-201ENST00000321105 UBE2AP49459 152 aa7.55□□□□□ -1.2
TOP3A-201ENST00000321105 KLK5Q9Y337 293 aaPredicted RBP7.55□□□□□ -1.2
TOP3A-201ENST00000321105 PDZD2O15018 2839 aa7.55□□□□□ -1.2
TOP3A-201ENST00000321105 FAM218AQ96MZ4 157 aa7.55□□□□□ -1.2
TOP3A-201ENST00000321105 JMJD7-PLA2G4BH0Y9G9 81 aa7.54□□□□□ -1.2
TOP3A-201ENST00000321105 FAM19A1Q7Z5A9 133 aa7.54□□□□□ -1.2
TOP3A-201ENST00000321105 ZNF73O43830 326 aaPredicted RBP7.54□□□□□ -1.2
TOP3A-201ENST00000321105 NREPQ16612 68 aa7.54□□□□□ -1.2
TOP3A-201ENST00000321105 LITAFQ99732 161 aa7.54□□□□□ -1.2
TOP3A-201ENST00000321105 ACYP1P07311 99 aa7.53□□□□□ -1.2
TOP3A-201ENST00000321105 IGLV5-45A0A087WSX0 123 aa7.53□□□□□ -1.2
TOP3A-201ENST00000321105 LRCOL1A6NCL2 159 aa7.52□□□□□ -1.21
TOP3A-201ENST00000321105 RPL28P46779 137 aaKnown RBP7.52□□□□□ -1.21
TOP3A-201ENST00000321105 ENHOQ6UWT2 76 aa7.52□□□□□ -1.21
TOP3A-201ENST00000321105 FUSP35637 526 aaKnown RBP eCLIP7.52□□□□□ -1.21
TOP3A-201ENST00000321105 PRO0461Q9UI25 63 aa7.52□□□□□ -1.21
TOP3A-201ENST00000321105 LY6G6CO95867 125 aa7.52□□□□□ -1.21
TOP3A-201ENST00000321105 CCKP06307 115 aa7.51□□□□□ -1.21
TOP3A-201ENST00000321105 A0A087WVE0 104 aa7.51□□□□□ -1.21
TOP3A-201ENST00000321105 LINC00643Q86TS7 51 aa7.51□□□□□ -1.21
TOP3A-201ENST00000321105 NDUFV3P56181 108 aaKnown RBP7.5□□□□□ -1.21
TOP3A-201ENST00000321105 Q8N814 137 aa7.49□□□□□ -1.21
TOP3A-201ENST00000321105 C6orf48Q9UBA6 75 aa7.49□□□□□ -1.21
TOP3A-201ENST00000321105 M0R378 163 aa7.49□□□□□ -1.21
TOP3A-201ENST00000321105 COX17Q14061 63 aa7.49□□□□□ -1.21
TOP3A-201ENST00000321105 EGFEM1PQ0D2K5 195 aa7.48□□□□□ -1.21
TOP3A-201ENST00000321105 NDUFC2-KCTD14E9PQ53 114 aa7.47□□□□□ -1.21
TOP3A-201ENST00000321105 IL17DQ8TAD2 202 aa7.47□□□□□ -1.21
TOP3A-201ENST00000321105 CDIP1Q9H305 208 aa7.47□□□□□ -1.21
TOP3A-201ENST00000321105 FAM104AQ969W3 186 aa7.46□□□□□ -1.21
TOP3A-201ENST00000321105 CDK2AP2O75956 126 aa7.46□□□□□ -1.22
TOP3A-201ENST00000321105 UPK3BQ9BT76 320 aa7.46□□□□□ -1.22
TOP3A-201ENST00000321105 HRCT1Q6UXD1 115 aa7.44□□□□□ -1.22
TOP3A-201ENST00000321105 C3orf22Q8N5N4 141 aa7.44□□□□□ -1.22
TOP3A-201ENST00000321105 PKD1L1Q8TDX9 2849 aa7.44□□□□□ -1.22
TOP3A-201ENST00000321105 SMIM20Q8N5G0 67 aa7.44□□□□□ -1.22
TOP3A-201ENST00000321105 LINC00588Q9Y4M8 146 aa7.44□□□□□ -1.22
TOP3A-201ENST00000321105 M0QXV9 152 aa7.43□□□□□ -1.22
TOP3A-201ENST00000321105 VPS13CQ709C8 3753 aa7.43□□□□□ -1.22
TOP3A-201ENST00000321105 PRLHP81277 87 aa7.43□□□□□ -1.22
TOP3A-201ENST00000321105 C20orf197Q8N268 126 aa7.43□□□□□ -1.22
TOP3A-201ENST00000321105 LINC00846Q9NV44 126 aa7.43□□□□□ -1.22
TOP3A-201ENST00000321105 K7EIL1 84 aa7.43□□□□□ -1.22
TOP3A-201ENST00000321105 BPY2O14599 106 aa7.43□□□□□ -1.22
TOP3A-201ENST00000321105 CCDC179H3BU77 68 aa7.42□□□□□ -1.22
TOP3A-201ENST00000321105 NDUFS5O43920 106 aa7.42□□□□□ -1.22
TOP3A-201ENST00000321105 TENM3Q9P273 2699 aa7.42□□□□□ -1.22
TOP3A-201ENST00000321105 DEFB116Q30KQ4 102 aa7.41□□□□□ -1.22
TOP3A-201ENST00000321105 LINC01556Q5JQF7 62 aa7.41□□□□□ -1.22
TOP3A-201ENST00000321105 LOC107984640A0A0U1RRK4 108 aa7.41□□□□□ -1.22
TOP3A-201ENST00000321105 H0Y9J4 135 aa7.4□□□□□ -1.23
TOP3A-201ENST00000321105 ATOX1O00244 68 aa7.4□□□□□ -1.23
TOP3A-201ENST00000321105 LINC00575Q6W349 94 aa7.4□□□□□ -1.23
TOP3A-201ENST00000321105 FAM168BA1KXE4 195 aa7.39□□□□□ -1.23
TOP3A-201ENST00000321105 MDFIQ99750 246 aa7.39□□□□□ -1.23
TOP3A-201ENST00000321105 IGLV9-49A0A0B4J1Y8 123 aa7.39□□□□□ -1.23
TOP3A-201ENST00000321105 CHTF8P0CG12 524 aa7.39□□□□□ -1.23
TOP3A-201ENST00000321105 Q8N9L7 120 aa7.39□□□□□ -1.23
TOP3A-201ENST00000321105 KIAA0087Q14695 138 aa7.38□□□□□ -1.23
TOP3A-201ENST00000321105 C14orf177Q52M58 125 aa7.38□□□□□ -1.23
TOP3A-201ENST00000321105 Q6ZRP5 223 aa7.38□□□□□ -1.23
TOP3A-201ENST00000321105 NDUFC2O95298 119 aa7.38□□□□□ -1.23
TOP3A-201ENST00000321105 C7orf33Q8WU49 177 aa7.38□□□□□ -1.23
TOP3A-201ENST00000321105 CASC10Q5T4H9 136 aa7.38□□□□□ -1.23
TOP3A-201ENST00000321105 C22orf24Q9Y442 160 aa7.37□□□□□ -1.23
TOP3A-201ENST00000321105 SPINK6Q6UWN8 80 aa7.37□□□□□ -1.23
TOP3A-201ENST00000321105 MRPL55Q7Z7F7 128 aaKnown RBP7.36□□□□□ -1.23
TOP3A-201ENST00000321105 LINC00612Q8N6U2 182 aa7.36□□□□□ -1.23
TOP3A-201ENST00000321105 B9D2Q9BPU9 175 aa7.36□□□□□ -1.23
TOP3A-201ENST00000321105 SNURFQ9Y675 71 aa7.36□□□□□ -1.23
TOP3A-201ENST00000321105 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.36□□□□□ -1.23
TOP3A-201ENST00000321105 C9orf129Q5T035 196 aaKnown RBP7.35□□□□□ -1.23
TOP3A-201ENST00000321105 WFDC13Q8IUB5 93 aa7.35□□□□□ -1.23
TOP3A-201ENST00000321105 LINC00167Q96N53 147 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms