RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 LINC01006Q8NI28 216 aa6.6□□□□□ -1.35
RPGR-201ENST00000318842 Q8N814 137 aa6.59□□□□□ -1.35
RPGR-201ENST00000318842 LAMTOR3Q9UHA4 124 aa6.59□□□□□ -1.35
RPGR-201ENST00000318842 ANK3Q12955 4377 aaKnown RBP6.59□□□□□ -1.35
RPGR-201ENST00000318842 MAST4O15021 2626 aa6.59□□□□□ -1.35
RPGR-201ENST00000318842 IBA57-AS1B1ANH7 110 aa6.59□□□□□ -1.36
RPGR-201ENST00000318842 NBEAL1Q6ZS30 2694 aa6.58□□□□□ -1.36
RPGR-201ENST00000318842 NOTCH1P46531 2555 aa6.58□□□□□ -1.36
RPGR-201ENST00000318842 SRRM2Q9UQ35 2752 aaKnown RBP6.58□□□□□ -1.36
RPGR-201ENST00000318842 FSHBP01225 129 aa6.58□□□□□ -1.36
RPGR-201ENST00000318842 Q6JHZ5 121 aa6.58□□□□□ -1.36
RPGR-201ENST00000318842 COPS9Q8WXC6 57 aa6.58□□□□□ -1.36
RPGR-201ENST00000318842 RMI2Q96E14 147 aa6.58□□□□□ -1.36
RPGR-201ENST00000318842 CCKP06307 115 aa6.58□□□□□ -1.36
RPGR-201ENST00000318842 FAM19A3Q7Z5A8 133 aa6.58□□□□□ -1.36
RPGR-201ENST00000318842 CSNK1G2-AS1Q8NCQ2 148 aa6.58□□□□□ -1.36
RPGR-201ENST00000318842 C19orf73Q9NVV2 129 aa6.58□□□□□ -1.36
RPGR-201ENST00000318842 DEFB135Q30KP9 77 aa6.57□□□□□ -1.36
RPGR-201ENST00000318842 OBSCN-AS1Q96MR7 158 aa6.57□□□□□ -1.36
RPGR-201ENST00000318842 S100A7L2Q5SY68 101 aa6.57□□□□□ -1.36
RPGR-201ENST00000318842 H0YGX0 51 aa6.56□□□□□ -1.36
RPGR-201ENST00000318842 Q6ZQY7 126 aa6.56□□□□□ -1.36
RPGR-201ENST00000318842 CHCHD10Q8WYQ3 142 aaPredicted RBP6.56□□□□□ -1.36
RPGR-201ENST00000318842 C16orf74Q96GX8 76 aa6.56□□□□□ -1.36
RPGR-201ENST00000318842 PF4P02776 101 aa6.55□□□□□ -1.36
RPGR-201ENST00000318842 KIAA0087Q14695 138 aa6.54□□□□□ -1.36
RPGR-201ENST00000318842 HIGD2BQ4VC39 106 aa6.54□□□□□ -1.36
RPGR-201ENST00000318842 CELA1Q9UNI1 258 aa6.54□□□□□ -1.36
RPGR-201ENST00000318842 COL6A5A8TX70 2615 aa6.54□□□□□ -1.36
RPGR-201ENST00000318842 FAM236DA0A1B0GTK5 79 aa6.54□□□□□ -1.36
RPGR-201ENST00000318842 PRB2P02812 416 aaPredicted RBP6.54□□□□□ -1.36
RPGR-201ENST00000318842 FAM236CP0DP71 79 aa6.54□□□□□ -1.36
RPGR-201ENST00000318842 C1orf195Q5TG92 126 aa6.53□□□□□ -1.36
RPGR-201ENST00000318842 KLK12Q9UKR0 248 aa6.53□□□□□ -1.36
RPGR-201ENST00000318842 DAD1P61803 113 aa6.53□□□□□ -1.36
RPGR-201ENST00000318842 KRTAP1-3Q8IUG1 177 aa6.53□□□□□ -1.36
RPGR-201ENST00000318842 LINC00474Q9P2X8 69 aa6.53□□□□□ -1.36
RPGR-201ENST00000318842 REG3AQ06141 175 aa6.52□□□□□ -1.37
RPGR-201ENST00000318842 DEFB113Q30KQ7 82 aa6.52□□□□□ -1.37
RPGR-201ENST00000318842 TM2D3Q9BRN9 247 aa6.52□□□□□ -1.37
RPGR-201ENST00000318842 COL7A1Q02388 2944 aa6.52□□□□□ -1.37
RPGR-201ENST00000318842 LY6G6DO95868 133 aa6.52□□□□□ -1.37
RPGR-201ENST00000318842 TRBV10-3A0A0K0K1G6 114 aa6.52□□□□□ -1.37
RPGR-201ENST00000318842 KRTAP10-3P60369 221 aa6.52□□□□□ -1.37
RPGR-201ENST00000318842 CYSRT1A8MQ03 144 aa6.51□□□□□ -1.37
RPGR-201ENST00000318842 LINC01547P58512 204 aaPredicted RBP6.51□□□□□ -1.37
RPGR-201ENST00000318842 DSCR9P59020 149 aa6.51□□□□□ -1.37
RPGR-201ENST00000318842 UBL5Q9BZL1 73 aa6.51□□□□□ -1.37
RPGR-201ENST00000318842 STAB1Q9NY15 2570 aa6.51□□□□□ -1.37
RPGR-201ENST00000318842 ANK2Q01484 3957 aa6.51□□□□□ -1.37
RPGR-201ENST00000318842 Q6ZVQ6 151 aa6.5□□□□□ -1.37
RPGR-201ENST00000318842 EPM2AB3EWF7 344 aa6.5□□□□□ -1.37
RPGR-201ENST00000318842 RBM3P98179 157 aaKnown RBP6.5□□□□□ -1.37
RPGR-201ENST00000318842 SPAG11BQ08648 103 aa6.5□□□□□ -1.37
RPGR-201ENST00000318842 IGHV4-28A0A0C4DH34 117 aa6.5□□□□□ -1.37
RPGR-201ENST00000318842 IGLV1-51P01701 117 aa6.5□□□□□ -1.37
RPGR-201ENST00000318842 LINC00575Q6W349 94 aa6.5□□□□□ -1.37
RPGR-201ENST00000318842 Q6ZQT0 140 aa6.5□□□□□ -1.37
RPGR-201ENST00000318842 Q8IZM0 81 aa6.5□□□□□ -1.37
RPGR-201ENST00000318842 DEFB105AQ8NG35 78 aa6.5□□□□□ -1.37
RPGR-201ENST00000318842 X6R8D5 127 aa6.5□□□□□ -1.37
RPGR-201ENST00000318842 BPY2O14599 106 aa6.49□□□□□ -1.37
RPGR-201ENST00000318842 LRCOL1A6NCL2 159 aa6.49□□□□□ -1.37
RPGR-201ENST00000318842 NDUFC2-KCTD14E9PQ53 114 aa6.49□□□□□ -1.37
RPGR-201ENST00000318842 F8WEM9 126 aa6.49□□□□□ -1.37
RPGR-201ENST00000318842 C3orf84H3BNL1 204 aa6.49□□□□□ -1.37
RPGR-201ENST00000318842 TMEM256-PLSCR3K7ERE1 68 aa6.49□□□□□ -1.37
RPGR-201ENST00000318842 LYPD5Q6UWN5 251 aa6.49□□□□□ -1.37
RPGR-201ENST00000318842 OVOL2Q9BRP0 275 aa6.49□□□□□ -1.37
RPGR-201ENST00000318842 A0A0G2JQZ4 141 aa6.47□□□□□ -1.37
RPGR-201ENST00000318842 A0A1W2PNN7 141 aa6.47□□□□□ -1.37
RPGR-201ENST00000318842 H7BZZ5 65 aa6.47□□□□□ -1.37
RPGR-201ENST00000318842 C16orf95Q9H693 158 aa6.47□□□□□ -1.37
RPGR-201ENST00000318842 NSD1Q96L73 2696 aaPredicted RBP6.46□□□□□ -1.37
RPGR-201ENST00000318842 MPLKIPQ8TAP9 179 aa6.46□□□□□ -1.37
RPGR-201ENST00000318842 PRO0255Q9UI72 69 aa6.46□□□□□ -1.37
RPGR-201ENST00000318842 NDUFC2O95298 119 aa6.46□□□□□ -1.38
RPGR-201ENST00000318842 CD164L2Q6UWJ8 174 aa6.46□□□□□ -1.38
RPGR-201ENST00000318842 JMJD7-PLA2G4BH0Y9G9 81 aa6.45□□□□□ -1.38
RPGR-201ENST00000318842 FAM229BQ4G0N7 80 aa6.45□□□□□ -1.38
RPGR-201ENST00000318842 RETNQ9HD89 108 aa6.45□□□□□ -1.38
RPGR-201ENST00000318842 SERP1Q9Y6X1 66 aa6.45□□□□□ -1.38
RPGR-201ENST00000318842 A0A0U1RQV1 116 aa6.45□□□□□ -1.38
RPGR-201ENST00000318842 C6orf48Q9UBA6 75 aa6.45□□□□□ -1.38
RPGR-201ENST00000318842 TENM2Q9NT68 2774 aa6.44□□□□□ -1.38
RPGR-201ENST00000318842 LINC00167Q96N53 147 aa6.44□□□□□ -1.38
RPGR-201ENST00000318842 LYSTQ99698 3801 aa6.44□□□□□ -1.38
RPGR-201ENST00000318842 MUC7Q8TAX7 377 aa6.43□□□□□ -1.38
RPGR-201ENST00000318842 PRR4Q16378 134 aa6.43□□□□□ -1.38
RPGR-201ENST00000318842 FP248Q71RG6 208 aaPredicted RBP6.43□□□□□ -1.38
RPGR-201ENST00000318842 WFDC10BQ8IUB3 73 aa6.42□□□□□ -1.38
RPGR-201ENST00000318842 ZNF561-AS1K7EIQ3 104 aa6.42□□□□□ -1.38
RPGR-201ENST00000318842 BRK1Q8WUW1 75 aa6.42□□□□□ -1.38
RPGR-201ENST00000318842 SMIM26A0A096LP01 95 aa6.41□□□□□ -1.38
RPGR-201ENST00000318842 A0A1B0GUV1 79 aa6.41□□□□□ -1.38
RPGR-201ENST00000318842 KRTAP1-1Q07627 177 aa6.41□□□□□ -1.38
RPGR-201ENST00000318842 RPL37AP8A6NKH3 93 aa6.4□□□□□ -1.38
RPGR-201ENST00000318842 ZNF73O43830 326 aaPredicted RBP6.4□□□□□ -1.38
RPGR-201ENST00000318842 IGLV6-57P01721 117 aa6.39□□□□□ -1.39
RPGR-201ENST00000318842 DEFB116Q30KQ4 102 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 229.4 ms