RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 MIEN1Q9BRT3 115 aa9.86□□□□□ -0.83
PDLIM5-202ENST00000318007 PGPEP1Q9NXJ5 209 aa9.86□□□□□ -0.83
PDLIM5-202ENST00000318007 C16orf90A8MZG2 172 aa9.86□□□□□ -0.83
PDLIM5-202ENST00000318007 COX17Q14061 63 aa9.86□□□□□ -0.83
PDLIM5-202ENST00000318007 C9orf129Q5T035 196 aaKnown RBP9.86□□□□□ -0.83
PDLIM5-202ENST00000318007 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.86□□□□□ -0.83
PDLIM5-202ENST00000318007 PTTG1IPP53801 180 aa9.85□□□□□ -0.83
PDLIM5-202ENST00000318007 KRTAP10-1P60331 282 aa9.85□□□□□ -0.83
PDLIM5-202ENST00000318007 SOSTDC1Q6X4U4 206 aa9.85□□□□□ -0.83
PDLIM5-202ENST00000318007 RNF151Q2KHN1 245 aa9.84□□□□□ -0.83
PDLIM5-202ENST00000318007 LRP1BQ9NZR2 4599 aa9.84□□□□□ -0.83
PDLIM5-202ENST00000318007 SNHG12Q9BXW3 62 aa9.84□□□□□ -0.83
PDLIM5-202ENST00000318007 TMEM238LA0A1B0GVL6 79 aa9.83□□□□□ -0.84
PDLIM5-202ENST00000318007 PRR3P79522 188 aaKnown RBP9.83□□□□□ -0.84
PDLIM5-202ENST00000318007 FAM19A5Q7Z5A7 132 aaPredicted RBP9.83□□□□□ -0.84
PDLIM5-202ENST00000318007 MUSTN1Q8IVN3 82 aa9.83□□□□□ -0.84
PDLIM5-202ENST00000318007 Q8NDZ9 215 aa9.83□□□□□ -0.84
PDLIM5-202ENST00000318007 FAM30AQ9NZY2 134 aa9.83□□□□□ -0.84
PDLIM5-202ENST00000318007 TLX1NBP0CAT3 122 aa9.83□□□□□ -0.84
PDLIM5-202ENST00000318007 LINC00308Q8TCZ7 52 aa9.83□□□□□ -0.84
PDLIM5-202ENST00000318007 DYNC1H1Q14204 4646 aaKnown RBP9.82□□□□□ -0.84
PDLIM5-202ENST00000318007 TIMM17BO60830 172 aa9.82□□□□□ -0.84
PDLIM5-202ENST00000318007 SERTAD4-AS1Q5TG53 156 aa9.81□□□□□ -0.84
PDLIM5-202ENST00000318007 SPANXDQ9BXN6 97 aa9.81□□□□□ -0.84
PDLIM5-202ENST00000318007 SPANXCQ9NY87 97 aa9.81□□□□□ -0.84
PDLIM5-202ENST00000318007 DNAH8Q96JB1 4490 aa9.81□□□□□ -0.84
PDLIM5-202ENST00000318007 HIGD1BQ9P298 99 aa9.8□□□□□ -0.84
PDLIM5-202ENST00000318007 A0A1W2PNN7 141 aa9.79□□□□□ -0.84
PDLIM5-202ENST00000318007 NCR3O14931 201 aa9.79□□□□□ -0.84
PDLIM5-202ENST00000318007 SPANXB1Q9NS25 103 aaPredicted RBP9.79□□□□□ -0.84
PDLIM5-202ENST00000318007 HINT1P49773 126 aaPredicted RBP9.78□□□□□ -0.84
PDLIM5-202ENST00000318007 GAGE10A6NGK3 116 aa9.77□□□□□ -0.84
PDLIM5-202ENST00000318007 SPACA4Q8TDM5 124 aa9.77□□□□□ -0.84
PDLIM5-202ENST00000318007 A0A087WYN8 130 aa9.77□□□□□ -0.85
PDLIM5-202ENST00000318007 FXYD2P54710 66 aa9.77□□□□□ -0.85
PDLIM5-202ENST00000318007 BATFQ16520 125 aa9.77□□□□□ -0.85
PDLIM5-202ENST00000318007 KRTAP7-1Q8IUC3 87 aa9.77□□□□□ -0.85
PDLIM5-202ENST00000318007 A4D1N5 150 aa9.76□□□□□ -0.85
PDLIM5-202ENST00000318007 CEND1Q8N111 149 aa9.76□□□□□ -0.85
PDLIM5-202ENST00000318007 HSD52Q0P140 79 aa9.75□□□□□ -0.85
PDLIM5-202ENST00000318007 Q6ZVH6 145 aa9.74□□□□□ -0.85
PDLIM5-202ENST00000318007 SCXQ7RTU7 201 aa9.74□□□□□ -0.85
PDLIM5-202ENST00000318007 NKAPP1Q8N9T2 125 aa9.74□□□□□ -0.85
PDLIM5-202ENST00000318007 LINC00474Q9P2X8 69 aa9.74□□□□□ -0.85
PDLIM5-202ENST00000318007 M0QXV9 152 aa9.73□□□□□ -0.85
PDLIM5-202ENST00000318007 VPREB1P12018 145 aa9.73□□□□□ -0.85
PDLIM5-202ENST00000318007 IFITM1P13164 125 aa9.73□□□□□ -0.85
PDLIM5-202ENST00000318007 RPL24P83731 157 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-202ENST00000318007 PHF5AQ7RTV0 110 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-202ENST00000318007 CIRBP-AS1Q8TBR5 109 aa9.73□□□□□ -0.85
PDLIM5-202ENST00000318007 PKIGQ9Y2B9 76 aa9.73□□□□□ -0.85
PDLIM5-202ENST00000318007 IGKV2-28A0A075B6P5 120 aa9.72□□□□□ -0.85
PDLIM5-202ENST00000318007 RPL37AP8A6NKH3 93 aa9.72□□□□□ -0.85
PDLIM5-202ENST00000318007 IGKV2D-28P01615 120 aa9.72□□□□□ -0.85
PDLIM5-202ENST00000318007 C22orf24Q9Y442 160 aa9.72□□□□□ -0.85
PDLIM5-202ENST00000318007 K7ERJ3 54 aa9.72□□□□□ -0.85
PDLIM5-202ENST00000318007 COL5A1-AS1Q5SY13 56 aa9.72□□□□□ -0.85
PDLIM5-202ENST00000318007 OR13C6PQ8NH95 151 aa9.72□□□□□ -0.85
PDLIM5-202ENST00000318007 NHP2Q9NX24 153 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-202ENST00000318007 APOBP04114 4563 aaKnown RBP9.71□□□□□ -0.86
PDLIM5-202ENST00000318007 TAL2Q16559 108 aa9.7□□□□□ -0.86
PDLIM5-202ENST00000318007 BVES-AS1Q5T3Y7 98 aa9.7□□□□□ -0.86
PDLIM5-202ENST00000318007 COPS9Q8WXC6 57 aa9.7□□□□□ -0.86
PDLIM5-202ENST00000318007 A6NDN8 102 aa9.7□□□□□ -0.86
PDLIM5-202ENST00000318007 H7C2G1 150 aa9.7□□□□□ -0.86
PDLIM5-202ENST00000318007 LINC00337Q8N6G1 96 aa9.7□□□□□ -0.86
PDLIM5-202ENST00000318007 LOC107984156A0A0G2JMH3 177 aa9.69□□□□□ -0.86
PDLIM5-202ENST00000318007 Q6ZSA8 131 aa9.69□□□□□ -0.86
PDLIM5-202ENST00000318007 ARL17AQ8IVW1 177 aa9.69□□□□□ -0.86
PDLIM5-202ENST00000318007 MRPL55Q7Z7F7 128 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-202ENST00000318007 C7orf33Q8WU49 177 aa9.68□□□□□ -0.86
PDLIM5-202ENST00000318007 CFC1BP0CG36 223 aa9.68□□□□□ -0.86
PDLIM5-202ENST00000318007 CFC1P0CG37 223 aa9.68□□□□□ -0.86
PDLIM5-202ENST00000318007 S100A7L2Q5SY68 101 aa9.68□□□□□ -0.86
PDLIM5-202ENST00000318007 UBE2BP63146 152 aa9.67□□□□□ -0.86
PDLIM5-202ENST00000318007 LINC00167Q96N53 147 aa9.67□□□□□ -0.86
PDLIM5-202ENST00000318007 TRBV10-3A0A0K0K1G6 114 aa9.66□□□□□ -0.86
PDLIM5-202ENST00000318007 SMR3BP02814 79 aaPredicted RBP9.66□□□□□ -0.86
PDLIM5-202ENST00000318007 RAB37Q96AX2 223 aa9.66□□□□□ -0.86
PDLIM5-202ENST00000318007 A6NJY4 79 aa9.66□□□□□ -0.86
PDLIM5-202ENST00000318007 NDUFC2O95298 119 aa9.66□□□□□ -0.86
PDLIM5-202ENST00000318007 KRTAP11-1Q8IUC1 163 aa9.66□□□□□ -0.86
PDLIM5-202ENST00000318007 PLAC8Q9NZF1 115 aa9.66□□□□□ -0.86
PDLIM5-202ENST00000318007 XGP55808 180 aa9.65□□□□□ -0.86
PDLIM5-202ENST00000318007 M0R378 163 aa9.64□□□□□ -0.87
PDLIM5-202ENST00000318007 PLA2G2DQ9UNK4 145 aa9.64□□□□□ -0.87
PDLIM5-202ENST00000318007 RPL13AP40429 203 aaKnown RBP9.64□□□□□ -0.87
PDLIM5-202ENST00000318007 KIAA1109Q2LD37 5005 aa9.62□□□□□ -0.87
PDLIM5-202ENST00000318007 IGLV5-37A0A075B6J1 123 aa9.61□□□□□ -0.87
PDLIM5-202ENST00000318007 Q1RN00 199 aa9.61□□□□□ -0.87
PDLIM5-202ENST00000318007 NAA38Q9BRA0 125 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-202ENST00000318007 UBE2V1Q13404 147 aa9.61□□□□□ -0.87
PDLIM5-202ENST00000318007 FAT1Q14517 4588 aa9.61□□□□□ -0.87
PDLIM5-202ENST00000318007 TRAV13-2A0A0B4J235 113 aa9.6□□□□□ -0.87
PDLIM5-202ENST00000318007 IGLV1-50A0A075B6I6 118 aa9.59□□□□□ -0.87
PDLIM5-202ENST00000318007 A0A0B4J2C4 111 aa9.59□□□□□ -0.87
PDLIM5-202ENST00000318007 TRBV10-2A0A0K0K1G8 114 aa9.59□□□□□ -0.87
PDLIM5-202ENST00000318007 TMEM126AQ9H061 195 aa9.59□□□□□ -0.87
PDLIM5-202ENST00000318007 IGLV6-57P01721 117 aa9.59□□□□□ -0.87
PDLIM5-202ENST00000318007 PPDPFQ9H3Y8 114 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms