RNA–Protein interactions for RNA: ENST00000316087.12

SPATA9-202, Transcript of spermatogenesis associated 9, humanhuman

TSL 1 (best)

Gene SPATA9, Length 1,583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA9-202ENST00000316087 NBASA2RRP1 2371 aa4.23□□□□□ -1.73
SPATA9-202ENST00000316087 OXTP01178 125 aa4.23□□□□□ -1.73
SPATA9-202ENST00000316087 COX7BP24311 80 aa4.23□□□□□ -1.73
SPATA9-202ENST00000316087 CYSRT1A8MQ03 144 aa4.22□□□□□ -1.73
SPATA9-202ENST00000316087 ZNF73O43830 326 aaPredicted RBP4.22□□□□□ -1.73
SPATA9-202ENST00000316087 ELOF1P60002 83 aaKnown RBP4.22□□□□□ -1.73
SPATA9-202ENST00000316087 HAMPP81172 84 aa4.22□□□□□ -1.73
SPATA9-202ENST00000316087 EGFEM1PQ0D2K5 195 aa4.22□□□□□ -1.73
SPATA9-202ENST00000316087 Q6ZQY7 126 aa4.22□□□□□ -1.73
SPATA9-202ENST00000316087 WFDC10AQ9H1F0 79 aa4.22□□□□□ -1.73
SPATA9-202ENST00000316087 SORL1Q92673 2214 aa4.22□□□□□ -1.73
SPATA9-202ENST00000316087 ANKRD17O75179 2603 aaKnown RBP4.21□□□□□ -1.74
SPATA9-202ENST00000316087 CELSR1Q9NYQ6 3014 aa4.21□□□□□ -1.74
SPATA9-202ENST00000316087 TRBV7-4A0A0J9YYF1 115 aa4.21□□□□□ -1.74
SPATA9-202ENST00000316087 M0R378 163 aa4.21□□□□□ -1.74
SPATA9-202ENST00000316087 CDK2AP2O75956 126 aa4.21□□□□□ -1.74
SPATA9-202ENST00000316087 KRTAP10-9P60411 292 aa4.21□□□□□ -1.74
SPATA9-202ENST00000316087 CLPSL2Q6UWE3 100 aa4.21□□□□□ -1.74
SPATA9-202ENST00000316087 C20orf197Q8N268 126 aa4.21□□□□□ -1.74
SPATA9-202ENST00000316087 ZNF843Q8N446 348 aa4.21□□□□□ -1.74
SPATA9-202ENST00000316087 CSPG4Q6UVK1 2322 aa4.2□□□□□ -1.74
SPATA9-202ENST00000316087 FAM19A1Q7Z5A9 133 aa4.2□□□□□ -1.74
SPATA9-202ENST00000316087 WFDC11Q8NEX6 87 aa4.2□□□□□ -1.74
SPATA9-202ENST00000316087 SMIM26A0A096LP01 95 aa4.19□□□□□ -1.74
SPATA9-202ENST00000316087 PRR3P79522 188 aaKnown RBP4.19□□□□□ -1.74
SPATA9-202ENST00000316087 CREBBPQ92793 2442 aa4.19□□□□□ -1.74
SPATA9-202ENST00000316087 ITPR1Q14643 2758 aa4.19□□□□□ -1.74
SPATA9-202ENST00000316087 ASH1LQ9NR48 2969 aaKnown RBP4.19□□□□□ -1.74
SPATA9-202ENST00000316087 RELNP78509 3460 aa4.19□□□□□ -1.74
SPATA9-202ENST00000316087 IGLV10-54A0A075B6I4 117 aa4.19□□□□□ -1.74
SPATA9-202ENST00000316087 IGLV9-49A0A0B4J1Y8 123 aa4.19□□□□□ -1.74
SPATA9-202ENST00000316087 EPM2AB3EWF7 344 aa4.19□□□□□ -1.74
SPATA9-202ENST00000316087 H7BZZ5 65 aa4.19□□□□□ -1.74
SPATA9-202ENST00000316087 KRTAP5-3Q6L8H2 238 aa4.19□□□□□ -1.74
SPATA9-202ENST00000316087 UNQ6190/PRO20217Q6UXQ8 127 aa4.19□□□□□ -1.74
SPATA9-202ENST00000316087 SPATA3Q8NHX4 192 aa4.19□□□□□ -1.74
SPATA9-202ENST00000316087 A0A096LPF7 62 aa4.18□□□□□ -1.74
SPATA9-202ENST00000316087 HIGD2BQ4VC39 106 aa4.18□□□□□ -1.74
SPATA9-202ENST00000316087 C9orf116Q5BN46 136 aaPredicted RBP4.18□□□□□ -1.74
SPATA9-202ENST00000316087 CAMK2N2Q96S95 79 aa4.18□□□□□ -1.74
SPATA9-202ENST00000316087 DEFB135Q30KP9 77 aa4.17□□□□□ -1.74
SPATA9-202ENST00000316087 Q8NAQ8 132 aa4.17□□□□□ -1.74
SPATA9-202ENST00000316087 LINC00476Q8WZB0 136 aa4.17□□□□□ -1.74
SPATA9-202ENST00000316087 DHRS4-AS1Q9P1J3 65 aa4.17□□□□□ -1.74
SPATA9-202ENST00000316087 KLK12Q9UKR0 248 aa4.17□□□□□ -1.74
SPATA9-202ENST00000316087 FUSP35637 526 aaKnown RBP eCLIP4.16□□□□□ -1.74
SPATA9-202ENST00000316087 KRTAP1-1Q07627 177 aa4.16□□□□□ -1.74
SPATA9-202ENST00000316087 NREPQ16612 68 aa4.16□□□□□ -1.74
SPATA9-202ENST00000316087 WFDC9Q8NEX5 89 aa4.16□□□□□ -1.74
SPATA9-202ENST00000316087 WWC2-AS2Q96NR7 200 aa4.16□□□□□ -1.74
SPATA9-202ENST00000316087 CYSTM1Q9H1C7 97 aa4.16□□□□□ -1.74
SPATA9-202ENST00000316087 C6orf48Q9UBA6 75 aa4.16□□□□□ -1.74
SPATA9-202ENST00000316087 CELA1Q9UNI1 258 aa4.16□□□□□ -1.74
SPATA9-202ENST00000316087 SVEP1Q4LDE5 3571 aa4.16□□□□□ -1.74
SPATA9-202ENST00000316087 BPY2O14599 106 aa4.15□□□□□ -1.74
SPATA9-202ENST00000316087 C10orf25Q5T742 122 aa4.15□□□□□ -1.74
SPATA9-202ENST00000316087 C11orf45Q8TAV5 145 aa4.15□□□□□ -1.74
SPATA9-202ENST00000316087 KRTAP9-8Q9BYQ0 159 aa4.15□□□□□ -1.74
SPATA9-202ENST00000316087 PKD1L2Q7Z442 2459 aa4.15□□□□□ -1.75
SPATA9-202ENST00000316087 Q5XG85 94 aa4.14□□□□□ -1.75
SPATA9-202ENST00000316087 NKAPP1Q8N9T2 125 aa4.14□□□□□ -1.75
SPATA9-202ENST00000316087 TMEM254Q8TBM7 123 aa4.14□□□□□ -1.75
SPATA9-202ENST00000316087 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.14□□□□□ -1.75
SPATA9-202ENST00000316087 ZFHX3Q15911 3703 aa4.14□□□□□ -1.75
SPATA9-202ENST00000316087 IGLV5-48A0A075B6I7 105 aa4.14□□□□□ -1.75
SPATA9-202ENST00000316087 F8WEM9 126 aa4.14□□□□□ -1.75
SPATA9-202ENST00000316087 PRB1P04280 392 aa4.14□□□□□ -1.75
SPATA9-202ENST00000316087 KRTAP19-4Q3LI73 84 aa4.14□□□□□ -1.75
SPATA9-202ENST00000316087 Q8NDZ9 215 aa4.14□□□□□ -1.75
SPATA9-202ENST00000316087 KCNQ1DNQ9H478 68 aa4.14□□□□□ -1.75
SPATA9-202ENST00000316087 PRO0628Q9UI54 55 aa4.14□□□□□ -1.75
SPATA9-202ENST00000316087 SPG11Q96JI7 2443 aa4.13□□□□□ -1.75
SPATA9-202ENST00000316087 KRTAP9-7A8MTY7 169 aa4.13□□□□□ -1.75
SPATA9-202ENST00000316087 TLX1NBP0CAT3 122 aa4.13□□□□□ -1.75
SPATA9-202ENST00000316087 UBR5O95071 2799 aaPredicted RBP4.12□□□□□ -1.75
SPATA9-202ENST00000316087 TRAV10A0A0B4J240 114 aa4.12□□□□□ -1.75
SPATA9-202ENST00000316087 INAFM1C9JVW0 142 aa4.12□□□□□ -1.75
SPATA9-202ENST00000316087 HTN3P15516 51 aa4.12□□□□□ -1.75
SPATA9-202ENST00000316087 LINC01556Q5JQF7 62 aa4.12□□□□□ -1.75
SPATA9-202ENST00000316087 XAGE1AQ9HD64 81 aa4.12□□□□□ -1.75
SPATA9-202ENST00000316087 NCOR2Q9Y618 2525 aa4.12□□□□□ -1.75
SPATA9-202ENST00000316087 MXRA5Q9NR99 2828 aa4.12□□□□□ -1.75
SPATA9-202ENST00000316087 USP9XQ93008 2570 aaPredicted RBP4.12□□□□□ -1.75
SPATA9-202ENST00000316087 IGLV5-52A0A0A0MRZ9 124 aa4.11□□□□□ -1.75
SPATA9-202ENST00000316087 SYCNQ0VAF6 134 aa4.11□□□□□ -1.75
SPATA9-202ENST00000316087 LCE5AQ5TCM9 118 aa4.11□□□□□ -1.75
SPATA9-202ENST00000316087 RMI2Q96E14 147 aa4.11□□□□□ -1.75
SPATA9-202ENST00000316087 CACNA1AO00555 2505 aa4.11□□□□□ -1.75
SPATA9-202ENST00000316087 SPTBN4Q9H254 2564 aa4.1□□□□□ -1.75
SPATA9-202ENST00000316087 CHD8Q9HCK8 2581 aa4.1□□□□□ -1.75
SPATA9-202ENST00000316087 IGLV5-37A0A075B6J1 123 aa4.1□□□□□ -1.75
SPATA9-202ENST00000316087 NDUFB1O75438 58 aa4.1□□□□□ -1.75
SPATA9-202ENST00000316087 IGKV4-1P06312 121 aa4.1□□□□□ -1.75
SPATA9-202ENST00000316087 CD164Q04900 197 aa4.1□□□□□ -1.75
SPATA9-202ENST00000316087 C4orf26Q17RF5 130 aa4.1□□□□□ -1.75
SPATA9-202ENST00000316087 KPRPQ5T749 579 aaPredicted RBP4.1□□□□□ -1.75
SPATA9-202ENST00000316087 CRYBG3Q68DQ2 2970 aa4.1□□□□□ -1.75
SPATA9-202ENST00000316087 HRCT1Q6UXD1 115 aa4.1□□□□□ -1.75
SPATA9-202ENST00000316087 TM2D3Q9BRN9 247 aa4.1□□□□□ -1.75
SPATA9-202ENST00000316087 OCR1Q9BZK8 76 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms