RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 A0A087WVE0 104 aa8.29□□□□□ -1.08
AMBRA1-201ENST00000314845 LIMD2Q9BT23 127 aa8.29□□□□□ -1.08
AMBRA1-201ENST00000314845 COL4A2P08572 1712 aa8.29□□□□□ -1.08
AMBRA1-201ENST00000314845 USP24Q9UPU5 2620 aa8.28□□□□□ -1.08
AMBRA1-201ENST00000314845 MKI67P46013 3256 aaKnown RBP8.28□□□□□ -1.08
AMBRA1-201ENST00000314845 SBSPONQ8IVN8 264 aa8.28□□□□□ -1.08
AMBRA1-201ENST00000314845 IGLV5-45A0A087WSX0 123 aa8.27□□□□□ -1.09
AMBRA1-201ENST00000314845 MGAM2Q2M2H8 2515 aa8.27□□□□□ -1.09
AMBRA1-201ENST00000314845 KLK9Q2XQG4 91 aa8.27□□□□□ -1.09
AMBRA1-201ENST00000314845 HECTD1Q9ULT8 2610 aa8.26□□□□□ -1.09
AMBRA1-201ENST00000314845 PMAIP1Q13794 54 aa8.26□□□□□ -1.09
AMBRA1-201ENST00000314845 C6orf48Q9UBA6 75 aa8.25□□□□□ -1.09
AMBRA1-201ENST00000314845 PTPRBP23467 1997 aa8.25□□□□□ -1.09
AMBRA1-201ENST00000314845 LINC00167Q96N53 147 aa8.25□□□□□ -1.09
AMBRA1-201ENST00000314845 CHD9Q3L8U1 2897 aa8.24□□□□□ -1.09
AMBRA1-201ENST00000314845 LINC00846Q9NV44 126 aa8.24□□□□□ -1.09
AMBRA1-201ENST00000314845 TRBV7-6A0A0J9YX20 115 aa8.24□□□□□ -1.09
AMBRA1-201ENST00000314845 Q8NAQ8 132 aa8.23□□□□□ -1.09
AMBRA1-201ENST00000314845 LAMA3Q16787 3333 aa8.22□□□□□ -1.09
AMBRA1-201ENST00000314845 HCG22E2RYF7 251 aa8.22□□□□□ -1.09
AMBRA1-201ENST00000314845 DEFB116Q30KQ4 102 aa8.22□□□□□ -1.09
AMBRA1-201ENST00000314845 KIAA0087Q14695 138 aa8.22□□□□□ -1.09
AMBRA1-201ENST00000314845 H0Y9P7 68 aa8.21□□□□□ -1.1
AMBRA1-201ENST00000314845 Q9UF83 564 aa8.21□□□□□ -1.1
AMBRA1-201ENST00000314845 TRBV7-7A0A0K0K1E9 115 aa8.21□□□□□ -1.1
AMBRA1-201ENST00000314845 C5orf42Q9H799 3197 aa8.2□□□□□ -1.1
AMBRA1-201ENST00000314845 NBDYA0A0U1RRE5 68 aa8.2□□□□□ -1.1
AMBRA1-201ENST00000314845 CXCL6P80162 114 aa8.2□□□□□ -1.1
AMBRA1-201ENST00000314845 PCOTHQ58A44 107 aa8.2□□□□□ -1.1
AMBRA1-201ENST00000314845 SOSTDC1Q6X4U4 206 aa8.19□□□□□ -1.1
AMBRA1-201ENST00000314845 TMEM254Q8TBM7 123 aa8.18□□□□□ -1.1
AMBRA1-201ENST00000314845 PRO0628Q9UI54 55 aa8.18□□□□□ -1.1
AMBRA1-201ENST00000314845 A0A1B0GW54 56 aa8.18□□□□□ -1.1
AMBRA1-201ENST00000314845 RETNLBQ9BQ08 111 aa8.18□□□□□ -1.1
AMBRA1-201ENST00000314845 COL27A1Q8IZC6 1860 aaPredicted RBP8.18□□□□□ -1.1
AMBRA1-201ENST00000314845 PRRC2CQ9Y520 2896 aaKnown RBP8.18□□□□□ -1.1
AMBRA1-201ENST00000314845 BRCA2P51587 3418 aa8.18□□□□□ -1.1
AMBRA1-201ENST00000314845 LINC00588Q9Y4M8 146 aa8.18□□□□□ -1.1
AMBRA1-201ENST00000314845 SPATA3Q8NHX4 192 aa8.17□□□□□ -1.1
AMBRA1-201ENST00000314845 CDIP1Q9H305 208 aa8.17□□□□□ -1.1
AMBRA1-201ENST00000314845 MAST4O15021 2626 aa8.17□□□□□ -1.1
AMBRA1-201ENST00000314845 hDV103S1A0JD37 113 aa8.16□□□□□ -1.1
AMBRA1-201ENST00000314845 MOBPQ13875 183 aa8.16□□□□□ -1.1
AMBRA1-201ENST00000314845 ELOF1P60002 83 aaKnown RBP8.15□□□□□ -1.1
AMBRA1-201ENST00000314845 RPS28P62857 69 aaKnown RBP8.15□□□□□ -1.1
AMBRA1-201ENST00000314845 C16orf90A8MZG2 172 aa8.15□□□□□ -1.11
AMBRA1-201ENST00000314845 WWC2-AS2Q96NR7 200 aa8.14□□□□□ -1.11
AMBRA1-201ENST00000314845 GVQW2A0A096LPI5 108 aaPredicted RBP8.14□□□□□ -1.11
AMBRA1-201ENST00000314845 RTL8CO15255 209 aa8.14□□□□□ -1.11
AMBRA1-201ENST00000314845 ATRQ13535 2644 aa8.14□□□□□ -1.11
AMBRA1-201ENST00000314845 Q6ZRX8 168 aa8.14□□□□□ -1.11
AMBRA1-201ENST00000314845 SPACA4Q8TDM5 124 aa8.14□□□□□ -1.11
AMBRA1-201ENST00000314845 Q6ZRP5 223 aa8.13□□□□□ -1.11
AMBRA1-201ENST00000314845 DNAH10OSP0CZ25 163 aa8.13□□□□□ -1.11
AMBRA1-201ENST00000314845 CRYGAP11844 174 aa8.13□□□□□ -1.11
AMBRA1-201ENST00000314845 FAM229AH3BQW9 127 aa8.13□□□□□ -1.11
AMBRA1-201ENST00000314845 SPINK1P00995 79 aa8.12□□□□□ -1.11
AMBRA1-201ENST00000314845 PHF5AQ7RTV0 110 aaKnown RBP8.12□□□□□ -1.11
AMBRA1-201ENST00000314845 C1orf64Q8NEQ6 169 aa8.12□□□□□ -1.11
AMBRA1-201ENST00000314845 BCE1O60756 84 aa8.11□□□□□ -1.11
AMBRA1-201ENST00000314845 TP53AIP1Q9HCN2 124 aa8.11□□□□□ -1.11
AMBRA1-201ENST00000314845 Q8NBF4 154 aa8.11□□□□□ -1.11
AMBRA1-201ENST00000314845 A0A0C4DFX4 3053 aa8.11□□□□□ -1.11
AMBRA1-201ENST00000314845 IGKV2D-30A0A075B6S6 120 aa8.11□□□□□ -1.11
AMBRA1-201ENST00000314845 IGKV2-30P06310 120 aa8.11□□□□□ -1.11
AMBRA1-201ENST00000314845 PCSK5Q92824 1860 aa8.1□□□□□ -1.11
AMBRA1-201ENST00000314845 TRANK1O15050 2925 aa8.1□□□□□ -1.11
AMBRA1-201ENST00000314845 FAM218AQ96MZ4 157 aa8.1□□□□□ -1.11
AMBRA1-201ENST00000314845 EPM2AB3EWF7 344 aa8.09□□□□□ -1.11
AMBRA1-201ENST00000314845 A0A096LNT2 108 aa8.09□□□□□ -1.11
AMBRA1-201ENST00000314845 LINC00476Q8WZB0 136 aa8.08□□□□□ -1.12
AMBRA1-201ENST00000314845 CSNK1G2-AS1Q8NCQ2 148 aa8.08□□□□□ -1.12
AMBRA1-201ENST00000314845 SMIM29Q86T20 159 aa8.08□□□□□ -1.12
AMBRA1-201ENST00000314845 PSPHP1O15172 72 aa8.07□□□□□ -1.12
AMBRA1-201ENST00000314845 SMCPP49901 116 aaPredicted RBP8.06□□□□□ -1.12
AMBRA1-201ENST00000314845 TYMSOSQ8TAI1 123 aa8.06□□□□□ -1.12
AMBRA1-201ENST00000314845 LOC110117498A0A087WWA1 95 aa8.06□□□□□ -1.12
AMBRA1-201ENST00000314845 Q6ZQT0 140 aa8.05□□□□□ -1.12
AMBRA1-201ENST00000314845 PRUNE2Q8WUY3 3088 aa8.05□□□□□ -1.12
AMBRA1-201ENST00000314845 VPREB1P12018 145 aa8.05□□□□□ -1.12
AMBRA1-201ENST00000314845 CHTF8P0CG12 524 aa8.04□□□□□ -1.12
AMBRA1-201ENST00000314845 K7EIL1 84 aa8.04□□□□□ -1.12
AMBRA1-201ENST00000314845 LAMA2P24043 3122 aaKnown RBP8.04□□□□□ -1.12
AMBRA1-201ENST00000314845 PRO0461Q9UI25 63 aa8.04□□□□□ -1.12
AMBRA1-201ENST00000314845 C19orf73Q9NVV2 129 aa8.03□□□□□ -1.12
AMBRA1-201ENST00000314845 ST20-AS1Q8NBB2 130 aa8.03□□□□□ -1.12
AMBRA1-201ENST00000314845 IGLV6-57P01721 117 aa8.02□□□□□ -1.13
AMBRA1-201ENST00000314845 HELZ2Q9BYK8 2649 aaKnown RBP8.02□□□□□ -1.13
AMBRA1-201ENST00000314845 LITAFQ99732 161 aa8.01□□□□□ -1.13
AMBRA1-201ENST00000314845 H3BPC8 53 aa8.01□□□□□ -1.13
AMBRA1-201ENST00000314845 C7orf65Q6ZTY9 151 aa8□□□□□ -1.13
AMBRA1-201ENST00000314845 LINC00313P59037 77 aa8□□□□□ -1.13
AMBRA1-201ENST00000314845 PRR34Q9NV39 138 aa8□□□□□ -1.13
AMBRA1-201ENST00000314845 KRTAP10-11P60412 298 aa8□□□□□ -1.13
AMBRA1-201ENST00000314845 TRBV7-4A0A0J9YYF1 115 aa7.99□□□□□ -1.13
AMBRA1-201ENST00000314845 ACYP2P14621 99 aa7.99□□□□□ -1.13
AMBRA1-201ENST00000314845 PLA2G1BP04054 148 aaKnown RBP7.98□□□□□ -1.13
AMBRA1-201ENST00000314845 FLNAP21333 2647 aaKnown RBP7.98□□□□□ -1.13
AMBRA1-201ENST00000314845 TRAV22A0A0B4J277 110 aa7.98□□□□□ -1.13
AMBRA1-201ENST00000314845 GIG44P09565 113 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms