RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 CD164L2Q6UWJ8 174 aa8.44□□□□□ -1.06
RNF4-201ENST00000314289 TRAV13-2A0A0B4J235 113 aa8.44□□□□□ -1.06
RNF4-201ENST00000314289 LOC107984640A0A0U1RRK4 108 aa8.44□□□□□ -1.06
RNF4-201ENST00000314289 IGKV2-28A0A075B6P5 120 aa8.43□□□□□ -1.06
RNF4-201ENST00000314289 IGKV2D-28P01615 120 aa8.43□□□□□ -1.06
RNF4-201ENST00000314289 PRR3P79522 188 aaKnown RBP8.43□□□□□ -1.06
RNF4-201ENST00000314289 SMIM11BQ8TCY0 68 aa8.43□□□□□ -1.06
RNF4-201ENST00000314289 RPL28P46779 137 aaKnown RBP8.42□□□□□ -1.06
RNF4-201ENST00000314289 ENHOQ6UWT2 76 aa8.42□□□□□ -1.06
RNF4-201ENST00000314289 COL7A1Q02388 2944 aa8.42□□□□□ -1.06
RNF4-201ENST00000314289 OR13C6PQ8NH95 151 aa8.42□□□□□ -1.06
RNF4-201ENST00000314289 KIAA0087Q14695 138 aa8.41□□□□□ -1.06
RNF4-201ENST00000314289 C11orf45Q8TAV5 145 aa8.41□□□□□ -1.06
RNF4-201ENST00000314289 DEFB131BA0A096LNP1 70 aa8.41□□□□□ -1.06
RNF4-201ENST00000314289 IBA57-AS1B1ANH7 110 aa8.41□□□□□ -1.06
RNF4-201ENST00000314289 SLPIP03973 132 aa8.41□□□□□ -1.06
RNF4-201ENST00000314289 C10orf25Q5T742 122 aa8.41□□□□□ -1.06
RNF4-201ENST00000314289 Q8IZM0 81 aa8.41□□□□□ -1.06
RNF4-201ENST00000314289 LECT2O14960 151 aa8.4□□□□□ -1.06
RNF4-201ENST00000314289 COX7CP15954 63 aa8.4□□□□□ -1.06
RNF4-201ENST00000314289 CXCL5P42830 114 aa8.4□□□□□ -1.06
RNF4-201ENST00000314289 ESRGQ1W209 222 aa8.4□□□□□ -1.06
RNF4-201ENST00000314289 hADV29S1A0JD25 119 aa8.4□□□□□ -1.06
RNF4-201ENST00000314289 A0A087WVE0 104 aa8.4□□□□□ -1.07
RNF4-201ENST00000314289 NCR3O14931 201 aa8.4□□□□□ -1.07
RNF4-201ENST00000314289 UNQ6190/PRO20217Q6UXQ8 127 aa8.39□□□□□ -1.07
RNF4-201ENST00000314289 LINC00846Q9NV44 126 aa8.38□□□□□ -1.07
RNF4-201ENST00000314289 A0A1B0GX51 115 aa8.38□□□□□ -1.07
RNF4-201ENST00000314289 SPAG11BQ08648 103 aa8.38□□□□□ -1.07
RNF4-201ENST00000314289 LYSTQ99698 3801 aa8.38□□□□□ -1.07
RNF4-201ENST00000314289 CYSTM1Q9H1C7 97 aa8.38□□□□□ -1.07
RNF4-201ENST00000314289 TENM2Q9NT68 2774 aa8.37□□□□□ -1.07
RNF4-201ENST00000314289 HUWE1Q7Z6Z7 4374 aaKnown RBP8.37□□□□□ -1.07
RNF4-201ENST00000314289 K7EIL1 84 aa8.37□□□□□ -1.07
RNF4-201ENST00000314289 ATOX1O00244 68 aa8.37□□□□□ -1.07
RNF4-201ENST00000314289 C2orf48Q96LS8 159 aa8.37□□□□□ -1.07
RNF4-201ENST00000314289 HIGD2BQ4VC39 106 aa8.37□□□□□ -1.07
RNF4-201ENST00000314289 PRR34Q9NV39 138 aa8.37□□□□□ -1.07
RNF4-201ENST00000314289 RPL18AQ02543 176 aaKnown RBP8.35□□□□□ -1.07
RNF4-201ENST00000314289 Q8NDZ9 215 aa8.35□□□□□ -1.07
RNF4-201ENST00000314289 MDFIQ99750 246 aa8.35□□□□□ -1.07
RNF4-201ENST00000314289 HIST1H4AP62805 103 aaKnown RBP8.34□□□□□ -1.07
RNF4-201ENST00000314289 H0YGX0 51 aa8.34□□□□□ -1.07
RNF4-201ENST00000314289 J3KT08 172 aa8.34□□□□□ -1.07
RNF4-201ENST00000314289 CRYGAP11844 174 aa8.33□□□□□ -1.08
RNF4-201ENST00000314289 Q6JHZ5 121 aa8.32□□□□□ -1.08
RNF4-201ENST00000314289 FAM19A5Q7Z5A7 132 aaPredicted RBP8.32□□□□□ -1.08
RNF4-201ENST00000314289 XAGE1AQ9HD64 81 aa8.31□□□□□ -1.08
RNF4-201ENST00000314289 H3BNG1 76 aa8.31□□□□□ -1.08
RNF4-201ENST00000314289 LINC01561Q8N1V8 128 aa8.31□□□□□ -1.08
RNF4-201ENST00000314289 ORMDL1Q9P0S3 153 aa8.31□□□□□ -1.08
RNF4-201ENST00000314289 IGKV2D-24A0A075B6R9 120 aa8.31□□□□□ -1.08
RNF4-201ENST00000314289 USP17L23D6RBM5 183 aa8.31□□□□□ -1.08
RNF4-201ENST00000314289 SERP2Q8N6R1 65 aa8.29□□□□□ -1.08
RNF4-201ENST00000314289 OBSCN-AS1Q96MR7 158 aa8.29□□□□□ -1.08
RNF4-201ENST00000314289 C6orf48Q9UBA6 75 aa8.29□□□□□ -1.08
RNF4-201ENST00000314289 TM2D3Q9BRN9 247 aa8.28□□□□□ -1.08
RNF4-201ENST00000314289 ZNF561-AS1K7EIQ3 104 aa8.28□□□□□ -1.08
RNF4-201ENST00000314289 DSCR8Q96T75 97 aa8.28□□□□□ -1.08
RNF4-201ENST00000314289 KRTAP26-1Q6PEX3 210 aa8.27□□□□□ -1.09
RNF4-201ENST00000314289 COX17Q14061 63 aa8.27□□□□□ -1.09
RNF4-201ENST00000314289 CAMK2N2Q96S95 79 aa8.27□□□□□ -1.09
RNF4-201ENST00000314289 C1orf43Q9BWL3 253 aa8.27□□□□□ -1.09
RNF4-201ENST00000314289 LINC00588Q9Y4M8 146 aa8.26□□□□□ -1.09
RNF4-201ENST00000314289 TRAV23DV6A0A075B6W5 121 aa8.26□□□□□ -1.09
RNF4-201ENST00000314289 TRAV10A0A0B4J240 114 aa8.26□□□□□ -1.09
RNF4-201ENST00000314289 CCKP06307 115 aa8.26□□□□□ -1.09
RNF4-201ENST00000314289 C15orf56Q8N910 161 aa8.26□□□□□ -1.09
RNF4-201ENST00000314289 CSMD3Q7Z407 3707 aa8.25□□□□□ -1.09
RNF4-201ENST00000314289 Q6ZRU5 148 aa8.25□□□□□ -1.09
RNF4-201ENST00000314289 FAM19A1Q7Z5A9 133 aa8.25□□□□□ -1.09
RNF4-201ENST00000314289 LINC01556Q5JQF7 62 aa8.24□□□□□ -1.09
RNF4-201ENST00000314289 S100A7L2Q5SY68 101 aa8.24□□□□□ -1.09
RNF4-201ENST00000314289 UPK3BQ9BT76 320 aa8.24□□□□□ -1.09
RNF4-201ENST00000314289 CASC10Q5T4H9 136 aa8.24□□□□□ -1.09
RNF4-201ENST00000314289 GHRHP01286 108 aa8.23□□□□□ -1.09
RNF4-201ENST00000314289 TMEM258P61165 79 aa8.23□□□□□ -1.09
RNF4-201ENST00000314289 DPH3Q96FX2 82 aa8.23□□□□□ -1.09
RNF4-201ENST00000314289 C6orf99Q4VX62 202 aa8.23□□□□□ -1.09
RNF4-201ENST00000314289 Q8N814 137 aa8.23□□□□□ -1.09
RNF4-201ENST00000314289 DNAH9Q9NYC9 4486 aa8.22□□□□□ -1.09
RNF4-201ENST00000314289 C5orf47Q569G3 176 aa8.21□□□□□ -1.09
RNF4-201ENST00000314289 DNAH10Q8IVF4 4471 aa8.21□□□□□ -1.1
RNF4-201ENST00000314289 OXTP01178 125 aa8.21□□□□□ -1.1
RNF4-201ENST00000314289 JMJD7-PLA2G4BH0Y9G9 81 aa8.21□□□□□ -1.1
RNF4-201ENST00000314289 NDUFC2O95298 119 aa8.21□□□□□ -1.1
RNF4-201ENST00000314289 RPS28P62857 69 aaKnown RBP8.2□□□□□ -1.1
RNF4-201ENST00000314289 TMEM256-PLSCR3K7ERE1 68 aa8.2□□□□□ -1.1
RNF4-201ENST00000314289 DNAH7Q8WXX0 4024 aa8.19□□□□□ -1.1
RNF4-201ENST00000314289 DNAH10OSP0CZ25 163 aa8.19□□□□□ -1.1
RNF4-201ENST00000314289 C20orf197Q8N268 126 aa8.18□□□□□ -1.1
RNF4-201ENST00000314289 UBL5Q9BZL1 73 aa8.18□□□□□ -1.1
RNF4-201ENST00000314289 TRBV10-3A0A0K0K1G6 114 aa8.18□□□□□ -1.1
RNF4-201ENST00000314289 Q6ZRP5 223 aa8.18□□□□□ -1.1
RNF4-201ENST00000314289 GVQW2A0A096LPI5 108 aaPredicted RBP8.17□□□□□ -1.1
RNF4-201ENST00000314289 LINC00167Q96N53 147 aa8.17□□□□□ -1.1
RNF4-201ENST00000314289 LAMTOR3Q9UHA4 124 aa8.16□□□□□ -1.1
RNF4-201ENST00000314289 C4orf26Q17RF5 130 aa8.16□□□□□ -1.1
RNF4-201ENST00000314289 DNHD1Q96M86 4753 aa8.16□□□□□ -1.1
RNF4-201ENST00000314289 ATP5EP2Q5VTU8 51 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms