RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 LINC00269Q8N2A0 174 aa6.63□□□□□ -1.35
RBFOX1-201ENST00000311745 C20orf203Q8NBC4 194 aa6.63□□□□□ -1.35
RBFOX1-201ENST00000311745 CHCHD7Q9BUK0 85 aa6.63□□□□□ -1.35
RBFOX1-201ENST00000311745 MYO9AB2RTY4 2548 aa6.63□□□□□ -1.35
RBFOX1-201ENST00000311745 IGKV2-29A2NJV5 120 aaPredicted RBP6.63□□□□□ -1.35
RBFOX1-201ENST00000311745 SMIM11BQ8TCY0 68 aa6.63□□□□□ -1.35
RBFOX1-201ENST00000311745 CDKN2A-AS1Q9UH64 79 aa6.63□□□□□ -1.35
RBFOX1-201ENST00000311745 IGHV3-73A0A0B4J1V6 119 aa6.62□□□□□ -1.35
RBFOX1-201ENST00000311745 FAM19A3Q7Z5A8 133 aa6.62□□□□□ -1.35
RBFOX1-201ENST00000311745 OVOL2Q9BRP0 275 aa6.62□□□□□ -1.35
RBFOX1-201ENST00000311745 LINC01547P58512 204 aaPredicted RBP6.62□□□□□ -1.35
RBFOX1-201ENST00000311745 TENM1Q9UKZ4 2725 aa6.62□□□□□ -1.35
RBFOX1-201ENST00000311745 SPATA3Q8NHX4 192 aa6.61□□□□□ -1.35
RBFOX1-201ENST00000311745 HIGD2AQ9BW72 106 aa6.61□□□□□ -1.35
RBFOX1-201ENST00000311745 C2CD3Q4AC94 2353 aa6.61□□□□□ -1.35
RBFOX1-201ENST00000311745 TRBV7-4A0A0J9YYF1 115 aa6.61□□□□□ -1.35
RBFOX1-201ENST00000311745 TRBV10-1A0A0K0K1A3 114 aa6.61□□□□□ -1.35
RBFOX1-201ENST00000311745 ACANP16112 2415 aa6.61□□□□□ -1.35
RBFOX1-201ENST00000311745 NDUFS5O43920 106 aa6.61□□□□□ -1.35
RBFOX1-201ENST00000311745 CSNK1G2-AS1Q8NCQ2 148 aa6.61□□□□□ -1.35
RBFOX1-201ENST00000311745 WFDC10AQ9H1F0 79 aa6.61□□□□□ -1.35
RBFOX1-201ENST00000311745 TRBV10-3A0A0K0K1G6 114 aa6.6□□□□□ -1.35
RBFOX1-201ENST00000311745 J3QKU1 62 aa6.59□□□□□ -1.35
RBFOX1-201ENST00000311745 Q6ZTC4 211 aa6.59□□□□□ -1.35
RBFOX1-201ENST00000311745 LINC00337Q8N6G1 96 aa6.59□□□□□ -1.35
RBFOX1-201ENST00000311745 HCG22E2RYF7 251 aa6.59□□□□□ -1.35
RBFOX1-201ENST00000311745 NDUFA1O15239 70 aa6.59□□□□□ -1.35
RBFOX1-201ENST00000311745 IGLV1-51P01701 117 aa6.59□□□□□ -1.35
RBFOX1-201ENST00000311745 Q1T7F1 81 aa6.59□□□□□ -1.35
RBFOX1-201ENST00000311745 C1orf64Q8NEQ6 169 aa6.59□□□□□ -1.35
RBFOX1-201ENST00000311745 OBSCN-AS1Q96MR7 158 aa6.59□□□□□ -1.35
RBFOX1-201ENST00000311745 C16orf90A8MZG2 172 aa6.58□□□□□ -1.36
RBFOX1-201ENST00000311745 BPY2O14599 106 aa6.58□□□□□ -1.36
RBFOX1-201ENST00000311745 IGHV3-53P01767 116 aa6.58□□□□□ -1.36
RBFOX1-201ENST00000311745 VPREB1P12018 145 aa6.58□□□□□ -1.36
RBFOX1-201ENST00000311745 HTN1P15515 57 aa6.58□□□□□ -1.36
RBFOX1-201ENST00000311745 hDV103S1A0JD37 113 aa6.58□□□□□ -1.36
RBFOX1-201ENST00000311745 BCE1O60756 84 aa6.58□□□□□ -1.36
RBFOX1-201ENST00000311745 SND1-IT1Q9HBX3 110 aa6.58□□□□□ -1.36
RBFOX1-201ENST00000311745 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.58□□□□□ -1.36
RBFOX1-201ENST00000311745 H0YGX0 51 aa6.58□□□□□ -1.36
RBFOX1-201ENST00000311745 JMJD7-PLA2G4BH0Y9G9 81 aa6.57□□□□□ -1.36
RBFOX1-201ENST00000311745 INSP01308 110 aa6.57□□□□□ -1.36
RBFOX1-201ENST00000311745 SERTAD4-AS1Q5TG53 156 aa6.57□□□□□ -1.36
RBFOX1-201ENST00000311745 IGHV3-38A0A0C4DH36 116 aa6.56□□□□□ -1.36
RBFOX1-201ENST00000311745 Q8N9L7 120 aa6.56□□□□□ -1.36
RBFOX1-201ENST00000311745 CCDC168Q8NDH2 2452 aa6.56□□□□□ -1.36
RBFOX1-201ENST00000311745 NTM-AS1Q6ZSK4 140 aa6.56□□□□□ -1.36
RBFOX1-201ENST00000311745 LYRM9A8MSI8 78 aa6.56□□□□□ -1.36
RBFOX1-201ENST00000311745 M0R2N4 97 aa6.56□□□□□ -1.36
RBFOX1-201ENST00000311745 UBE2AP49459 152 aa6.56□□□□□ -1.36
RBFOX1-201ENST00000311745 TOMM7Q9P0U1 55 aa6.56□□□□□ -1.36
RBFOX1-201ENST00000311745 A6NED7 52 aa6.55□□□□□ -1.36
RBFOX1-201ENST00000311745 LINC00158P58513 81 aa6.55□□□□□ -1.36
RBFOX1-201ENST00000311745 FASNP49327 2511 aaKnown RBP6.55□□□□□ -1.36
RBFOX1-201ENST00000311745 WNK1Q9H4A3 2382 aa6.55□□□□□ -1.36
RBFOX1-201ENST00000311745 NSD1Q96L73 2696 aaPredicted RBP6.54□□□□□ -1.36
RBFOX1-201ENST00000311745 LCA10Q71F78 164 aa6.54□□□□□ -1.36
RBFOX1-201ENST00000311745 LY6G6DO95868 133 aa6.54□□□□□ -1.36
RBFOX1-201ENST00000311745 COX6A2Q02221 97 aa6.53□□□□□ -1.36
RBFOX1-201ENST00000311745 C7orf65Q6ZTY9 151 aa6.53□□□□□ -1.36
RBFOX1-201ENST00000311745 NKAPP1Q8N9T2 125 aa6.53□□□□□ -1.36
RBFOX1-201ENST00000311745 PRR15LQ9BU68 103 aa6.53□□□□□ -1.36
RBFOX1-201ENST00000311745 IGLV5-45A0A087WSX0 123 aa6.52□□□□□ -1.37
RBFOX1-201ENST00000311745 CELA1Q9UNI1 258 aa6.52□□□□□ -1.37
RBFOX1-201ENST00000311745 MTORP42345 2549 aa6.52□□□□□ -1.37
RBFOX1-201ENST00000311745 IGKV2-28A0A075B6P5 120 aa6.52□□□□□ -1.37
RBFOX1-201ENST00000311745 IGKV2D-28P01615 120 aa6.52□□□□□ -1.37
RBFOX1-201ENST00000311745 JMJD1CQ15652 2540 aa6.51□□□□□ -1.37
RBFOX1-201ENST00000311745 IGHV3OR16-12A0A075B7B8 117 aa6.51□□□□□ -1.37
RBFOX1-201ENST00000311745 Q5VV11 94 aa6.51□□□□□ -1.37
RBFOX1-201ENST00000311745 DNAH1Q9P2D7 4330 aa6.51□□□□□ -1.37
RBFOX1-201ENST00000311745 PRAC1Q96KF2 57 aa6.51□□□□□ -1.37
RBFOX1-201ENST00000311745 HIVEP1P15822 2718 aa6.51□□□□□ -1.37
RBFOX1-201ENST00000311745 COX7B2Q8TF08 81 aa6.51□□□□□ -1.37
RBFOX1-201ENST00000311745 NOTCH3Q9UM47 2321 aa6.5□□□□□ -1.37
RBFOX1-201ENST00000311745 LOC100131303A0A0U1RQF7 123 aa6.5□□□□□ -1.37
RBFOX1-201ENST00000311745 ATP11AUNQ6ZP68 121 aa6.5□□□□□ -1.37
RBFOX1-201ENST00000311745 DIRC1Q969H9 104 aa6.5□□□□□ -1.37
RBFOX1-201ENST00000311745 TRGV1A0A0A0MS02 117 aa6.49□□□□□ -1.37
RBFOX1-201ENST00000311745 LINC00612Q8N6U2 182 aa6.49□□□□□ -1.37
RBFOX1-201ENST00000311745 NOP10Q9NPE3 64 aaKnown RBP6.49□□□□□ -1.37
RBFOX1-201ENST00000311745 FAM30AQ9NZY2 134 aa6.49□□□□□ -1.37
RBFOX1-201ENST00000311745 K7EQD1 137 aa6.49□□□□□ -1.37
RBFOX1-201ENST00000311745 CD164L2Q6UWJ8 174 aa6.49□□□□□ -1.37
RBFOX1-201ENST00000311745 SETD2Q9BYW2 2564 aaPredicted RBP6.49□□□□□ -1.37
RBFOX1-201ENST00000311745 HECTD1Q9ULT8 2610 aa6.48□□□□□ -1.37
RBFOX1-201ENST00000311745 IGKV3OR2-268A0A0C4DH90 116 aa6.48□□□□□ -1.37
RBFOX1-201ENST00000311745 PHF5AQ7RTV0 110 aaKnown RBP6.48□□□□□ -1.37
RBFOX1-201ENST00000311745 PSCAO43653 123 aa6.48□□□□□ -1.37
RBFOX1-201ENST00000311745 A6NN06 94 aa6.47□□□□□ -1.37
RBFOX1-201ENST00000311745 LINC00242Q5T6M2 205 aa6.47□□□□□ -1.37
RBFOX1-201ENST00000311745 IGLV5-39A0A0G2JS06 123 aa6.47□□□□□ -1.37
RBFOX1-201ENST00000311745 X6R8D5 127 aa6.47□□□□□ -1.37
RBFOX1-201ENST00000311745 C16orf74Q96GX8 76 aa6.47□□□□□ -1.37
RBFOX1-201ENST00000311745 INAFM1C9JVW0 142 aa6.46□□□□□ -1.37
RBFOX1-201ENST00000311745 FN1P02751 2386 aaKnown RBP6.46□□□□□ -1.37
RBFOX1-201ENST00000311745 J3QL48 77 aa6.46□□□□□ -1.38
RBFOX1-201ENST00000311745 CCL18P55774 89 aa6.46□□□□□ -1.38
RBFOX1-201ENST00000311745 Q6ZQT0 140 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms