RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 FAM236CP0DP71 79 aa7.67□□□□□ -1.18
PTPN7-201ENST00000309017 Q6ZQY7 126 aa7.67□□□□□ -1.18
PTPN7-201ENST00000309017 CSNK1G2-AS1Q8NCQ2 148 aa7.67□□□□□ -1.18
PTPN7-201ENST00000309017 A0A1B0GUV1 79 aa7.67□□□□□ -1.18
PTPN7-201ENST00000309017 SPAG11BQ08648 103 aa7.67□□□□□ -1.18
PTPN7-201ENST00000309017 SCXQ7RTU7 201 aa7.67□□□□□ -1.18
PTPN7-201ENST00000309017 WFDC11Q8NEX6 87 aa7.67□□□□□ -1.18
PTPN7-201ENST00000309017 ZNF561-AS1K7EIQ3 104 aa7.66□□□□□ -1.18
PTPN7-201ENST00000309017 LINC00575Q6W349 94 aa7.66□□□□□ -1.18
PTPN7-201ENST00000309017 LINC01006Q8NI28 216 aa7.66□□□□□ -1.18
PTPN7-201ENST00000309017 SNURFQ9Y675 71 aa7.66□□□□□ -1.18
PTPN7-201ENST00000309017 COX17Q14061 63 aa7.66□□□□□ -1.18
PTPN7-201ENST00000309017 UNQ6190/PRO20217Q6UXQ8 127 aa7.66□□□□□ -1.18
PTPN7-201ENST00000309017 C6orf223Q8N319 242 aa7.66□□□□□ -1.18
PTPN7-201ENST00000309017 OXTP01178 125 aa7.65□□□□□ -1.18
PTPN7-201ENST00000309017 LINC00167Q96N53 147 aa7.65□□□□□ -1.18
PTPN7-201ENST00000309017 TENM4Q6N022 2769 aa7.64□□□□□ -1.19
PTPN7-201ENST00000309017 C19orf73Q9NVV2 129 aa7.64□□□□□ -1.19
PTPN7-201ENST00000309017 XAGE1AQ9HD64 81 aa7.64□□□□□ -1.19
PTPN7-201ENST00000309017 LINC01547P58512 204 aaPredicted RBP7.64□□□□□ -1.19
PTPN7-201ENST00000309017 KIAA0087Q14695 138 aa7.64□□□□□ -1.19
PTPN7-201ENST00000309017 Q6ZQT0 140 aa7.64□□□□□ -1.19
PTPN7-201ENST00000309017 Q6ZVQ6 151 aa7.63□□□□□ -1.19
PTPN7-201ENST00000309017 TRBV10-3A0A0K0K1G6 114 aa7.63□□□□□ -1.19
PTPN7-201ENST00000309017 M0R2N4 97 aa7.63□□□□□ -1.19
PTPN7-201ENST00000309017 C10orf25Q5T742 122 aa7.63□□□□□ -1.19
PTPN7-201ENST00000309017 DAD1P61803 113 aa7.63□□□□□ -1.19
PTPN7-201ENST00000309017 TRAV7A0A075B6U4 112 aa7.62□□□□□ -1.19
PTPN7-201ENST00000309017 DEFB135Q30KP9 77 aa7.62□□□□□ -1.19
PTPN7-201ENST00000309017 KLK12Q9UKR0 248 aa7.62□□□□□ -1.19
PTPN7-201ENST00000309017 NDUFC2-KCTD14E9PQ53 114 aa7.62□□□□□ -1.19
PTPN7-201ENST00000309017 Q8NDZ9 215 aa7.62□□□□□ -1.19
PTPN7-201ENST00000309017 CYSRT1A8MQ03 144 aa7.62□□□□□ -1.19
PTPN7-201ENST00000309017 LINC00482Q8N8I6 264 aa7.62□□□□□ -1.19
PTPN7-201ENST00000309017 DIRC1Q969H9 104 aa7.61□□□□□ -1.19
PTPN7-201ENST00000309017 TRAV10A0A0B4J240 114 aa7.61□□□□□ -1.19
PTPN7-201ENST00000309017 RMI2Q96E14 147 aa7.61□□□□□ -1.19
PTPN7-201ENST00000309017 APCP25054 2843 aa7.59□□□□□ -1.19
PTPN7-201ENST00000309017 F8WEM9 126 aa7.59□□□□□ -1.19
PTPN7-201ENST00000309017 PDE6GP18545 87 aa7.59□□□□□ -1.2
PTPN7-201ENST00000309017 LYPD5Q6UWN5 251 aa7.59□□□□□ -1.2
PTPN7-201ENST00000309017 MUC7Q8TAX7 377 aa7.58□□□□□ -1.2
PTPN7-201ENST00000309017 LOC110117498A0A087WWA1 95 aa7.58□□□□□ -1.2
PTPN7-201ENST00000309017 IGHV4-28A0A0C4DH34 117 aa7.58□□□□□ -1.2
PTPN7-201ENST00000309017 COX7BP24311 80 aa7.58□□□□□ -1.2
PTPN7-201ENST00000309017 X6R8D5 127 aa7.58□□□□□ -1.2
PTPN7-201ENST00000309017 SPATA3Q8NHX4 192 aa7.57□□□□□ -1.2
PTPN7-201ENST00000309017 SERP1Q9Y6X1 66 aa7.57□□□□□ -1.2
PTPN7-201ENST00000309017 H7BZZ5 65 aa7.57□□□□□ -1.2
PTPN7-201ENST00000309017 Q5XG85 94 aa7.57□□□□□ -1.2
PTPN7-201ENST00000309017 SMR3AQ99954 134 aa7.57□□□□□ -1.2
PTPN7-201ENST00000309017 KMT2BQ9UMN6 2715 aaPredicted RBP7.56□□□□□ -1.2
PTPN7-201ENST00000309017 LYRM9A8MSI8 78 aa7.56□□□□□ -1.2
PTPN7-201ENST00000309017 ZNF73O43830 326 aaPredicted RBP7.56□□□□□ -1.2
PTPN7-201ENST00000309017 HIGD2BQ4VC39 106 aa7.56□□□□□ -1.2
PTPN7-201ENST00000309017 NSD1Q96L73 2696 aaPredicted RBP7.55□□□□□ -1.2
PTPN7-201ENST00000309017 TM2D3Q9BRN9 247 aa7.55□□□□□ -1.2
PTPN7-201ENST00000309017 CAMK2N2Q96S95 79 aa7.54□□□□□ -1.2
PTPN7-201ENST00000309017 ANK3Q12955 4377 aaKnown RBP7.54□□□□□ -1.2
PTPN7-201ENST00000309017 IGLV6-57P01721 117 aa7.54□□□□□ -1.2
PTPN7-201ENST00000309017 LINC00612Q8N6U2 182 aa7.54□□□□□ -1.2
PTPN7-201ENST00000309017 CXCL6P80162 114 aa7.54□□□□□ -1.2
PTPN7-201ENST00000309017 Q8N9L7 120 aa7.54□□□□□ -1.2
PTPN7-201ENST00000309017 H3BQ85 93 aa7.53□□□□□ -1.2
PTPN7-201ENST00000309017 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.53□□□□□ -1.2
PTPN7-201ENST00000309017 DEFB105AQ8NG35 78 aa7.52□□□□□ -1.21
PTPN7-201ENST00000309017 NREPQ16612 68 aa7.52□□□□□ -1.21
PTPN7-201ENST00000309017 KRTAP1-3Q8IUG1 177 aa7.52□□□□□ -1.21
PTPN7-201ENST00000309017 KLKP1Q107X0 134 aa7.51□□□□□ -1.21
PTPN7-201ENST00000309017 C6orf48Q9UBA6 75 aa7.51□□□□□ -1.21
PTPN7-201ENST00000309017 A0A0J9YWU9 116 aa7.51□□□□□ -1.21
PTPN7-201ENST00000309017 BCE1O60756 84 aa7.51□□□□□ -1.21
PTPN7-201ENST00000309017 IGHV4-30-4P0DP06 118 aa7.51□□□□□ -1.21
PTPN7-201ENST00000309017 MIFP14174 115 aa7.51□□□□□ -1.21
PTPN7-201ENST00000309017 LELP1Q5T871 98 aa7.51□□□□□ -1.21
PTPN7-201ENST00000309017 CELA1Q9UNI1 258 aa7.51□□□□□ -1.21
PTPN7-201ENST00000309017 BPY2O14599 106 aa7.51□□□□□ -1.21
PTPN7-201ENST00000309017 C16orf95Q9H693 158 aa7.51□□□□□ -1.21
PTPN7-201ENST00000309017 C3orf84H3BNL1 204 aa7.5□□□□□ -1.21
PTPN7-201ENST00000309017 APOC4P55056 127 aa7.5□□□□□ -1.21
PTPN7-201ENST00000309017 SPART-AS1P0CW21 52 aa7.5□□□□□ -1.21
PTPN7-201ENST00000309017 C1orf43Q9BWL3 253 aa7.49□□□□□ -1.21
PTPN7-201ENST00000309017 SMIM26A0A096LP01 95 aa7.49□□□□□ -1.21
PTPN7-201ENST00000309017 C9orf66Q5T8R8 295 aa7.49□□□□□ -1.21
PTPN7-201ENST00000309017 NDUFC1O43677 76 aa7.48□□□□□ -1.21
PTPN7-201ENST00000309017 TMEM254Q8TBM7 123 aa7.48□□□□□ -1.21
PTPN7-201ENST00000309017 HIVEP1P15822 2718 aa7.48□□□□□ -1.21
PTPN7-201ENST00000309017 TRBV7-4A0A0J9YYF1 115 aa7.47□□□□□ -1.21
PTPN7-201ENST00000309017 WIPF1O43516 503 aa7.47□□□□□ -1.21
PTPN7-201ENST00000309017 TRBV7-6A0A0J9YX20 115 aa7.47□□□□□ -1.21
PTPN7-201ENST00000309017 ELOF1P60002 83 aaKnown RBP7.47□□□□□ -1.21
PTPN7-201ENST00000309017 LINC00336Q6ZUF6 198 aa7.47□□□□□ -1.21
PTPN7-201ENST00000309017 MPLKIPQ8TAP9 179 aa7.47□□□□□ -1.21
PTPN7-201ENST00000309017 M0R378 163 aa7.46□□□□□ -1.22
PTPN7-201ENST00000309017 LINC00474Q9P2X8 69 aa7.46□□□□□ -1.22
PTPN7-201ENST00000309017 INAFM1C9JVW0 142 aa7.45□□□□□ -1.22
PTPN7-201ENST00000309017 NKAPP1Q8N9T2 125 aa7.45□□□□□ -1.22
PTPN7-201ENST00000309017 BRK1Q8WUW1 75 aa7.45□□□□□ -1.22
PTPN7-201ENST00000309017 MRAPQ8TCY5 172 aa7.44□□□□□ -1.22
PTPN7-201ENST00000309017 Q6ZRU5 148 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms