RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 TRBV6-8A0A0A6YYG3 113 aa10.38□□□□□ -0.75
SPIDR-201ENST00000297423 LINC00959A0A1B0GUT2 108 aa10.38□□□□□ -0.75
SPIDR-201ENST00000297423 Q5XG85 94 aa10.38□□□□□ -0.75
SPIDR-201ENST00000297423 XAGE1AQ9HD64 81 aa10.37□□□□□ -0.75
SPIDR-201ENST00000297423 Q8N3U1 123 aa10.37□□□□□ -0.75
SPIDR-201ENST00000297423 M0R2N4 97 aa10.36□□□□□ -0.75
SPIDR-201ENST00000297423 DEFB105AQ8NG35 78 aa10.36□□□□□ -0.75
SPIDR-201ENST00000297423 IGHV3OR16-9A0A0B4J2B5 98 aa10.35□□□□□ -0.75
SPIDR-201ENST00000297423 SERP1Q9Y6X1 66 aa10.35□□□□□ -0.75
SPIDR-201ENST00000297423 C16orf95Q9H693 158 aa10.34□□□□□ -0.75
SPIDR-201ENST00000297423 LINC01547P58512 204 aaPredicted RBP10.34□□□□□ -0.75
SPIDR-201ENST00000297423 TRAV7A0A075B6U4 112 aa10.33□□□□□ -0.76
SPIDR-201ENST00000297423 ATP5EP2Q5VTU8 51 aa10.33□□□□□ -0.76
SPIDR-201ENST00000297423 A0A087WZ39 114 aa10.33□□□□□ -0.76
SPIDR-201ENST00000297423 Q6ZVQ6 151 aa10.33□□□□□ -0.76
SPIDR-201ENST00000297423 PRR4Q16378 134 aa10.33□□□□□ -0.76
SPIDR-201ENST00000297423 TM2D3Q9BRN9 247 aa10.33□□□□□ -0.76
SPIDR-201ENST00000297423 COL6A5A8TX70 2615 aa10.32□□□□□ -0.76
SPIDR-201ENST00000297423 NIPBLQ6KC79 2804 aaeCLIP10.31□□□□□ -0.765e-6■■■■■ 32.2
SPIDR-201ENST00000297423 PRO0628Q9UI54 55 aa10.31□□□□□ -0.76
SPIDR-201ENST00000297423 SMIM26A0A096LP01 95 aa10.31□□□□□ -0.76
SPIDR-201ENST00000297423 TRBV7-6A0A0J9YX20 115 aa10.31□□□□□ -0.76
SPIDR-201ENST00000297423 VPS13CQ709C8 3753 aa10.31□□□□□ -0.76
SPIDR-201ENST00000297423 C6orf223Q8N319 242 aa10.3□□□□□ -0.76
SPIDR-201ENST00000297423 NDUFC2-KCTD14E9PQ53 114 aa10.3□□□□□ -0.76
SPIDR-201ENST00000297423 C3orf84H3BNL1 204 aa10.3□□□□□ -0.76
SPIDR-201ENST00000297423 H7BZZ5 65 aa10.29□□□□□ -0.76
SPIDR-201ENST00000297423 MXRA5Q9NR99 2828 aa10.29□□□□□ -0.76
SPIDR-201ENST00000297423 UNQ6190/PRO20217Q6UXQ8 127 aa10.29□□□□□ -0.76
SPIDR-201ENST00000297423 CELA1Q9UNI1 258 aa10.29□□□□□ -0.76
SPIDR-201ENST00000297423 MIFP14174 115 aa10.28□□□□□ -0.76
SPIDR-201ENST00000297423 CHCHD10Q8WYQ3 142 aaPredicted RBP10.28□□□□□ -0.76
SPIDR-201ENST00000297423 C16orf74Q96GX8 76 aa10.28□□□□□ -0.76
SPIDR-201ENST00000297423 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.28□□□□□ -0.76
SPIDR-201ENST00000297423 SPAG11BQ08648 103 aa10.27□□□□□ -0.77
SPIDR-201ENST00000297423 CMC4P56277 68 aaPredicted RBP10.26□□□□□ -0.77
SPIDR-201ENST00000297423 C1orf195Q5TG92 126 aa10.26□□□□□ -0.77
SPIDR-201ENST00000297423 NREPQ16612 68 aa10.26□□□□□ -0.77
SPIDR-201ENST00000297423 PDZD2O15018 2839 aa10.26□□□□□ -0.77
SPIDR-201ENST00000297423 ZNF561-AS1K7EIQ3 104 aa10.25□□□□□ -0.77
SPIDR-201ENST00000297423 SPATA3Q8NHX4 192 aa10.24□□□□□ -0.77
SPIDR-201ENST00000297423 KLK12Q9UKR0 248 aa10.24□□□□□ -0.77
SPIDR-201ENST00000297423 BPY2O14599 106 aa10.24□□□□□ -0.77
SPIDR-201ENST00000297423 WIPF1O43516 503 aa10.23□□□□□ -0.77
SPIDR-201ENST00000297423 NANOS2P60321 138 aaKnown RBP10.23□□□□□ -0.77
SPIDR-201ENST00000297423 REG3AQ06141 175 aa10.23□□□□□ -0.77
SPIDR-201ENST00000297423 LINC00575Q6W349 94 aa10.23□□□□□ -0.77
SPIDR-201ENST00000297423 FUSP35637 526 aaKnown RBP eCLIP10.23□□□□□ -0.77
SPIDR-201ENST00000297423 HIGD2BQ4VC39 106 aa10.23□□□□□ -0.77
SPIDR-201ENST00000297423 Q6ZQT0 140 aa10.22□□□□□ -0.77
SPIDR-201ENST00000297423 V9GYY9 64 aa10.22□□□□□ -0.77
SPIDR-201ENST00000297423 C10orf25Q5T742 122 aa10.22□□□□□ -0.77
SPIDR-201ENST00000297423 DIRC1Q969H9 104 aa10.22□□□□□ -0.77
SPIDR-201ENST00000297423 OBSCN-AS1Q96MR7 158 aa10.22□□□□□ -0.77
SPIDR-201ENST00000297423 Q8IZM0 81 aa10.21□□□□□ -0.77
SPIDR-201ENST00000297423 TMEM254Q8TBM7 123 aa10.21□□□□□ -0.77
SPIDR-201ENST00000297423 TRBV10-3A0A0K0K1G6 114 aa10.21□□□□□ -0.78
SPIDR-201ENST00000297423 FAM30AQ9NZY2 134 aa10.21□□□□□ -0.78
SPIDR-201ENST00000297423 LYPD5Q6UWN5 251 aa10.2□□□□□ -0.78
SPIDR-201ENST00000297423 BAHCC1Q9P281 2608 aa10.2□□□□□ -0.78
SPIDR-201ENST00000297423 SETXQ7Z333 2677 aaKnown RBP10.2□□□□□ -0.78
SPIDR-201ENST00000297423 MUC7Q8TAX7 377 aa10.19□□□□□ -0.78
SPIDR-201ENST00000297423 HIVEP1P15822 2718 aa10.19□□□□□ -0.78
SPIDR-201ENST00000297423 DEFB135Q30KP9 77 aa10.18□□□□□ -0.78
SPIDR-201ENST00000297423 CYSRT1A8MQ03 144 aa10.18□□□□□ -0.78
SPIDR-201ENST00000297423 COX7BP24311 80 aa10.18□□□□□ -0.78
SPIDR-201ENST00000297423 HIGD2AQ9BW72 106 aa10.18□□□□□ -0.78
SPIDR-201ENST00000297423 FP248Q71RG6 208 aaPredicted RBP10.17□□□□□ -0.78
SPIDR-201ENST00000297423 LINC00482Q8N8I6 264 aa10.17□□□□□ -0.78
SPIDR-201ENST00000297423 NBPF19A0A087WUL8 3843 aa10.17□□□□□ -0.78
SPIDR-201ENST00000297423 PSPHP1O15172 72 aa10.17□□□□□ -0.78
SPIDR-201ENST00000297423 IGLV1-51P01701 117 aa10.16□□□□□ -0.78
SPIDR-201ENST00000297423 CD164L2Q6UWJ8 174 aa10.16□□□□□ -0.78
SPIDR-201ENST00000297423 FAM19A3Q7Z5A8 133 aa10.15□□□□□ -0.78
SPIDR-201ENST00000297423 PRO0255Q9UI72 69 aa10.15□□□□□ -0.78
SPIDR-201ENST00000297423 C9orf66Q5T8R8 295 aa10.14□□□□□ -0.79
SPIDR-201ENST00000297423 Q8NDZ9 215 aa10.14□□□□□ -0.79
SPIDR-201ENST00000297423 CAMK2N2Q96S95 79 aa10.13□□□□□ -0.79
SPIDR-201ENST00000297423 KRTAP10-3P60369 221 aa10.13□□□□□ -0.79
SPIDR-201ENST00000297423 ZNF73O43830 326 aaPredicted RBP10.12□□□□□ -0.79
SPIDR-201ENST00000297423 FAM229BQ4G0N7 80 aa10.12□□□□□ -0.79
SPIDR-201ENST00000297423 PRYO14603 147 aa10.12□□□□□ -0.79
SPIDR-201ENST00000297423 KLKP1Q107X0 134 aa10.11□□□□□ -0.79
SPIDR-201ENST00000297423 NDUFC1O43677 76 aa10.11□□□□□ -0.79
SPIDR-201ENST00000297423 PDE6GP18545 87 aa10.11□□□□□ -0.79
SPIDR-201ENST00000297423 SEC61GP60059 68 aa10.1□□□□□ -0.79
SPIDR-201ENST00000297423 NSD1Q96L73 2696 aaPredicted RBP10.08□□□□□ -0.8
SPIDR-201ENST00000297423 GIG44P09565 113 aaPredicted RBP10.07□□□□□ -0.8
SPIDR-201ENST00000297423 ESRGQ1W209 222 aa10.07□□□□□ -0.8
SPIDR-201ENST00000297423 PLAC8L1A1L4L8 177 aa10.07□□□□□ -0.8
SPIDR-201ENST00000297423 DEFB116Q30KQ4 102 aa10.06□□□□□ -0.8
SPIDR-201ENST00000297423 CXCL6P80162 114 aa10.06□□□□□ -0.8
SPIDR-201ENST00000297423 COX17Q14061 63 aa10.06□□□□□ -0.8
SPIDR-201ENST00000297423 STAB1Q9NY15 2570 aa10.06□□□□□ -0.8
SPIDR-201ENST00000297423 ZNF469Q96JG9 3925 aaPredicted RBP10.05□□□□□ -0.8
SPIDR-201ENST00000297423 KIAA0087Q14695 138 aa10.05□□□□□ -0.8
SPIDR-201ENST00000297423 NKAPP1Q8N9T2 125 aa10.05□□□□□ -0.8
SPIDR-201ENST00000297423 IGKV2D-24A0A075B6R9 120 aa10.04□□□□□ -0.8
SPIDR-201ENST00000297423 SMIM29Q86T20 159 aa10.04□□□□□ -0.8
SPIDR-201ENST00000297423 SPTSSBQ8NFR3 76 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms