RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8□□□□□ -1.13
HMGB2-201ENST00000296503 IGKV2-29A2NJV5 120 aaPredicted RBP8□□□□□ -1.13
HMGB2-201ENST00000296503 REG3AQ06141 175 aa8□□□□□ -1.13
HMGB2-201ENST00000296503 SDIM1Q6ZPB5 146 aa8□□□□□ -1.13
HMGB2-201ENST00000296503 PPDPFQ9H3Y8 114 aa8□□□□□ -1.13
HMGB2-201ENST00000296503 IGLV5-52A0A0A0MRZ9 124 aa7.99□□□□□ -1.13
HMGB2-201ENST00000296503 RPL39P62891 51 aaKnown RBP7.99□□□□□ -1.13
HMGB2-201ENST00000296503 MRPS36P82909 103 aaKnown RBP7.99□□□□□ -1.13
HMGB2-201ENST00000296503 Q1RN00 199 aa7.99□□□□□ -1.13
HMGB2-201ENST00000296503 PRR34Q9NV39 138 aa7.99□□□□□ -1.13
HMGB2-201ENST00000296503 DYNC1H1Q14204 4646 aaKnown RBP7.99□□□□□ -1.13
HMGB2-201ENST00000296503 IGLV10-54A0A075B6I4 117 aa7.98□□□□□ -1.13
HMGB2-201ENST00000296503 CXCL5P42830 114 aa7.98□□□□□ -1.13
HMGB2-201ENST00000296503 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.97□□□□□ -1.13
HMGB2-201ENST00000296503 IGHV1-58A0A0C4DH39 117 aa7.97□□□□□ -1.13
HMGB2-201ENST00000296503 IGKV3OR2-268A0A0C4DH90 116 aa7.97□□□□□ -1.13
HMGB2-201ENST00000296503 IGLV4-3A0A075B6K6 122 aa7.96□□□□□ -1.13
HMGB2-201ENST00000296503 LINC00643Q86TS7 51 aa7.96□□□□□ -1.13
HMGB2-201ENST00000296503 A0A1B0GX51 115 aa7.96□□□□□ -1.14
HMGB2-201ENST00000296503 TINCRA0A1B0GVN0 87 aa7.95□□□□□ -1.14
HMGB2-201ENST00000296503 UQCRQO14949 82 aa7.95□□□□□ -1.14
HMGB2-201ENST00000296503 CDK2AP2O75956 126 aa7.95□□□□□ -1.14
HMGB2-201ENST00000296503 DGAT2L7PQ6IED9 249 aa7.95□□□□□ -1.14
HMGB2-201ENST00000296503 TIMM21Q9BVV7 248 aa7.95□□□□□ -1.14
HMGB2-201ENST00000296503 KRTAP10-1P60331 282 aa7.94□□□□□ -1.14
HMGB2-201ENST00000296503 RPS28P62857 69 aaKnown RBP7.94□□□□□ -1.14
HMGB2-201ENST00000296503 C14orf177Q52M58 125 aa7.94□□□□□ -1.14
HMGB2-201ENST00000296503 C3orf22Q8N5N4 141 aa7.94□□□□□ -1.14
HMGB2-201ENST00000296503 COPS9Q8WXC6 57 aa7.94□□□□□ -1.14
HMGB2-201ENST00000296503 LINC00526Q96FQ7 95 aa7.94□□□□□ -1.14
HMGB2-201ENST00000296503 A0A0J9YXV3 536 aa7.93□□□□□ -1.14
HMGB2-201ENST00000296503 USP17L23D6RBM5 183 aa7.93□□□□□ -1.14
HMGB2-201ENST00000296503 KRTAP26-1Q6PEX3 210 aa7.93□□□□□ -1.14
HMGB2-201ENST00000296503 LRP1BQ9NZR2 4599 aa7.93□□□□□ -1.14
HMGB2-201ENST00000296503 H7C2G1 150 aa7.92□□□□□ -1.14
HMGB2-201ENST00000296503 C5orf38Q86SI9 138 aa7.92□□□□□ -1.14
HMGB2-201ENST00000296503 DAND5Q8N907 189 aa7.92□□□□□ -1.14
HMGB2-201ENST00000296503 NDUFA12Q9UI09 145 aa7.92□□□□□ -1.14
HMGB2-201ENST00000296503 KIAA1109Q2LD37 5005 aa7.92□□□□□ -1.14
HMGB2-201ENST00000296503 TRACP01848 142 aa7.92□□□□□ -1.14
HMGB2-201ENST00000296503 DNAH5Q8TE73 4624 aa7.91□□□□□ -1.14
HMGB2-201ENST00000296503 CDC42SE2Q9NRR3 84 aa7.91□□□□□ -1.14
HMGB2-201ENST00000296503 IGLV5-45A0A087WSX0 123 aa7.9□□□□□ -1.14
HMGB2-201ENST00000296503 COX7A2LO14548 114 aa7.9□□□□□ -1.14
HMGB2-201ENST00000296503 CHCHD10Q8WYQ3 142 aaPredicted RBP7.9□□□□□ -1.14
HMGB2-201ENST00000296503 FAM104AQ969W3 186 aa7.9□□□□□ -1.14
HMGB2-201ENST00000296503 NDUFA1O15239 70 aa7.89□□□□□ -1.15
HMGB2-201ENST00000296503 PRSS2P07478 247 aa7.89□□□□□ -1.15
HMGB2-201ENST00000296503 ADAMTSL4-AS1Q5T5F5 129 aa7.89□□□□□ -1.15
HMGB2-201ENST00000296503 UBE2D4Q9Y2X8 147 aa7.89□□□□□ -1.15
HMGB2-201ENST00000296503 LINC00959A0A1B0GUT2 108 aa7.89□□□□□ -1.15
HMGB2-201ENST00000296503 CRYGAP11844 174 aa7.89□□□□□ -1.15
HMGB2-201ENST00000296503 CIRBPQ14011 172 aaKnown RBP7.89□□□□□ -1.15
HMGB2-201ENST00000296503 SS18Q15532 418 aa7.89□□□□□ -1.15
HMGB2-201ENST00000296503 INAFM2P0DMQ5 153 aa7.88□□□□□ -1.15
HMGB2-201ENST00000296503 HIST1H4AP62805 103 aaKnown RBP7.88□□□□□ -1.15
HMGB2-201ENST00000296503 OPRPNQ99935 248 aaPredicted RBP7.88□□□□□ -1.15
HMGB2-201ENST00000296503 CSDC2Q9Y534 153 aaKnown RBP7.88□□□□□ -1.15
HMGB2-201ENST00000296503 FAM236AA0A1B0GUQ0 79 aa7.87□□□□□ -1.15
HMGB2-201ENST00000296503 FAM236BA0A1B0GV22 79 aa7.87□□□□□ -1.15
HMGB2-201ENST00000296503 COX7CP15954 63 aa7.87□□□□□ -1.15
HMGB2-201ENST00000296503 XCL1P47992 114 aa7.87□□□□□ -1.15
HMGB2-201ENST00000296503 RNASE13Q5GAN3 156 aaKnown RBP7.87□□□□□ -1.15
HMGB2-201ENST00000296503 FAM19A3Q7Z5A8 133 aa7.87□□□□□ -1.15
HMGB2-201ENST00000296503 C9orf153Q5TBE3 101 aa7.87□□□□□ -1.15
HMGB2-201ENST00000296503 CLEC2BQ92478 149 aa7.87□□□□□ -1.15
HMGB2-201ENST00000296503 J3KT08 172 aa7.86□□□□□ -1.15
HMGB2-201ENST00000296503 C5orf47Q569G3 176 aa7.86□□□□□ -1.15
HMGB2-201ENST00000296503 FAM30AQ9NZY2 134 aa7.86□□□□□ -1.15
HMGB2-201ENST00000296503 HERC2O95714 4834 aa7.86□□□□□ -1.15
HMGB2-201ENST00000296503 ATOX1O00244 68 aa7.85□□□□□ -1.15
HMGB2-201ENST00000296503 HAMPP81172 84 aa7.85□□□□□ -1.15
HMGB2-201ENST00000296503 TRAV13-1A0A0B4J241 112 aa7.85□□□□□ -1.15
HMGB2-201ENST00000296503 IGHV3-64A0A075B6Q5 118 aa7.84□□□□□ -1.15
HMGB2-201ENST00000296503 IGLV5-39A0A0G2JS06 123 aa7.84□□□□□ -1.15
HMGB2-201ENST00000296503 CD164L2Q6UWJ8 174 aa7.84□□□□□ -1.15
HMGB2-201ENST00000296503 Q8N1X5 172 aa7.84□□□□□ -1.15
HMGB2-201ENST00000296503 SMR3BP02814 79 aaPredicted RBP7.83□□□□□ -1.16
HMGB2-201ENST00000296503 HIGD2BQ4VC39 106 aa7.83□□□□□ -1.16
HMGB2-201ENST00000296503 C9orf163Q8N9P6 203 aa7.83□□□□□ -1.16
HMGB2-201ENST00000296503 LINC00308Q8TCZ7 52 aa7.83□□□□□ -1.16
HMGB2-201ENST00000296503 C2orf48Q96LS8 159 aa7.83□□□□□ -1.16
HMGB2-201ENST00000296503 KRTAP17-1Q9BYP8 105 aa7.83□□□□□ -1.16
HMGB2-201ENST00000296503 APOBP04114 4563 aaKnown RBP7.83□□□□□ -1.16
HMGB2-201ENST00000296503 HERVK_113P63121 156 aa7.83□□□□□ -1.16
HMGB2-201ENST00000296503 C15orf56Q8N910 161 aa7.83□□□□□ -1.16
HMGB2-201ENST00000296503 HSPG2P98160 4391 aa7.83□□□□□ -1.16
HMGB2-201ENST00000296503 RYR1P21817 5038 aa7.82□□□□□ -1.16
HMGB2-201ENST00000296503 SMCR5Q8TEV8 140 aa7.82□□□□□ -1.16
HMGB2-201ENST00000296503 MALP21145 153 aa7.81□□□□□ -1.16
HMGB2-201ENST00000296503 KRTAP4-5Q9BYR2 181 aa7.81□□□□□ -1.16
HMGB2-201ENST00000296503 SLPIP03973 132 aa7.81□□□□□ -1.16
HMGB2-201ENST00000296503 BAALC-AS2P0C853 105 aa7.81□□□□□ -1.16
HMGB2-201ENST00000296503 CNBPP62633 177 aaKnown RBP7.81□□□□□ -1.16
HMGB2-201ENST00000296503 EPM2AB3EWF7 344 aa7.8□□□□□ -1.16
HMGB2-201ENST00000296503 Q6ZSA8 131 aa7.8□□□□□ -1.16
HMGB2-201ENST00000296503 C22orf24Q9Y442 160 aa7.8□□□□□ -1.16
HMGB2-201ENST00000296503 GVQW2A0A096LPI5 108 aaPredicted RBP7.79□□□□□ -1.16
HMGB2-201ENST00000296503 ZNF561-AS1K7EIQ3 104 aa7.79□□□□□ -1.16
HMGB2-201ENST00000296503 RPL28P46779 137 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms