RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 COMMD7Q86VX2 200 aa11.34□□□□□ -0.59
CXCL3-201ENST00000296026 BAGE3Q86Y29 109 aa11.34□□□□□ -0.59
CXCL3-201ENST00000296026 PLEKHB2Q96CS7 222 aa11.34□□□□□ -0.59
CXCL3-201ENST00000296026 TRAPPC1Q9Y5R8 145 aa11.34□□□□□ -0.59
CXCL3-201ENST00000296026 C10orf91Q5T1B1 145 aa11.33□□□□□ -0.6
CXCL3-201ENST00000296026 SFTA2Q6UW10 78 aa11.33□□□□□ -0.6
CXCL3-201ENST00000296026 CBLN2Q8IUK8 224 aa11.33□□□□□ -0.6
CXCL3-201ENST00000296026 CDIP1Q9H305 208 aa11.32□□□□□ -0.6
CXCL3-201ENST00000296026 CTAG1AP78358 180 aa11.31□□□□□ -0.6
CXCL3-201ENST00000296026 TPRXLQ17RH7 258 aa11.31□□□□□ -0.6
CXCL3-201ENST00000296026 C3orf22Q8N5N4 141 aa11.31□□□□□ -0.6
CXCL3-201ENST00000296026 HIGD2AQ9BW72 106 aa11.31□□□□□ -0.6
CXCL3-201ENST00000296026 IGLV7-46A0A075B6I9 117 aa11.3□□□□□ -0.6
CXCL3-201ENST00000296026 LINC00158P58513 81 aa11.3□□□□□ -0.6
CXCL3-201ENST00000296026 A0A0U1RRA0 63 aa11.28□□□□□ -0.6
CXCL3-201ENST00000296026 CHTOPQ9Y3Y2 248 aaKnown RBP11.28□□□□□ -0.6
CXCL3-201ENST00000296026 LCE2AQ5TA79 106 aaPredicted RBP11.26□□□□□ -0.61
CXCL3-201ENST00000296026 SPRR4Q96PI1 79 aa11.25□□□□□ -0.61
CXCL3-201ENST00000296026 TMEM223A0PJW6 202 aa11.24□□□□□ -0.61
CXCL3-201ENST00000296026 SPAG11AQ6PDA7 123 aa11.23□□□□□ -0.61
CXCL3-201ENST00000296026 KRTAP9-2Q9BYQ4 174 aa11.23□□□□□ -0.61
CXCL3-201ENST00000296026 PPDPFQ9H3Y8 114 aa11.23□□□□□ -0.61
CXCL3-201ENST00000296026 ATP6V1G1O75348 118 aa11.21□□□□□ -0.61
CXCL3-201ENST00000296026 SMIM13P0DJ93 91 aa11.21□□□□□ -0.61
CXCL3-201ENST00000296026 BOD1L2Q8IYS8 172 aa11.21□□□□□ -0.61
CXCL3-201ENST00000296026 ZNF706Q9Y5V0 76 aaPredicted RBP11.21□□□□□ -0.61
CXCL3-201ENST00000296026 TRAV12-1A0A0B4J245 112 aa11.2□□□□□ -0.62
CXCL3-201ENST00000296026 PRYO14603 147 aa11.2□□□□□ -0.62
CXCL3-201ENST00000296026 C4orf48Q5BLP8 95 aa11.19□□□□□ -0.62
CXCL3-201ENST00000296026 MEIG1Q5JSS6 88 aa11.19□□□□□ -0.62
CXCL3-201ENST00000296026 IFI27L1Q96BM0 104 aa11.19□□□□□ -0.62
CXCL3-201ENST00000296026 NCR3O14931 201 aa11.18□□□□□ -0.62
CXCL3-201ENST00000296026 APOC3P02656 99 aa11.18□□□□□ -0.62
CXCL3-201ENST00000296026 MIR7-3HGQ8N6C7 128 aa11.18□□□□□ -0.62
CXCL3-201ENST00000296026 LINC00337Q8N6G1 96 aa11.17□□□□□ -0.62
CXCL3-201ENST00000296026 DAND5Q8N907 189 aa11.17□□□□□ -0.62
CXCL3-201ENST00000296026 CHCHD1Q96BP2 118 aaKnown RBP11.17□□□□□ -0.62
CXCL3-201ENST00000296026 SPRR1AP35321 89 aa11.16□□□□□ -0.62
CXCL3-201ENST00000296026 HERV-K104P63124 156 aa11.16□□□□□ -0.62
CXCL3-201ENST00000296026 Q8NBF4 154 aa11.16□□□□□ -0.62
CXCL3-201ENST00000296026 SMCR5Q8TEV8 140 aa11.16□□□□□ -0.62
CXCL3-201ENST00000296026 KCNQ1DNQ9H478 68 aa11.16□□□□□ -0.62
CXCL3-201ENST00000296026 FAT4Q6V0I7 4981 aa11.15□□□□□ -0.62
CXCL3-201ENST00000296026 SNAPINO95295 136 aa11.15□□□□□ -0.62
CXCL3-201ENST00000296026 FP248Q71RG6 208 aaPredicted RBP11.15□□□□□ -0.62
CXCL3-201ENST00000296026 ETDCA0A1B0GVM5 59 aa11.14□□□□□ -0.63
CXCL3-201ENST00000296026 KRTAP4-16G5E9R7 235 aaPredicted RBP11.14□□□□□ -0.63
CXCL3-201ENST00000296026 MUC17Q685J3 4493 aa11.14□□□□□ -0.63
CXCL3-201ENST00000296026 TRBV10-3A0A0K0K1G6 114 aa11.13□□□□□ -0.63
CXCL3-201ENST00000296026 LINC00587B1AMM8 73 aa11.13□□□□□ -0.63
CXCL3-201ENST00000296026 SVBPQ8N300 66 aa11.13□□□□□ -0.63
CXCL3-201ENST00000296026 NDUFA12Q9UI09 145 aa11.13□□□□□ -0.63
CXCL3-201ENST00000296026 NDUFA5Q16718 116 aa11.12□□□□□ -0.63
CXCL3-201ENST00000296026 MYMXA0A1B0GTQ4 84 aa11.1□□□□□ -0.63
CXCL3-201ENST00000296026 FAM19A2Q8N3H0 131 aa11.1□□□□□ -0.63
CXCL3-201ENST00000296026 YPEL4Q96NS1 127 aa11.1□□□□□ -0.63
CXCL3-201ENST00000296026 MAP1LC3CQ9BXW4 147 aa11.1□□□□□ -0.63
CXCL3-201ENST00000296026 HSBP1O75506 76 aa11.09□□□□□ -0.63
CXCL3-201ENST00000296026 SPINK1P00995 79 aa11.09□□□□□ -0.63
CXCL3-201ENST00000296026 S100A12P80511 92 aa11.09□□□□□ -0.63
CXCL3-201ENST00000296026 KRTAP13-3Q3SY46 172 aa11.09□□□□□ -0.63
CXCL3-201ENST00000296026 LINC00483Q53H64 154 aa11.09□□□□□ -0.63
CXCL3-201ENST00000296026 H0Y8G0 127 aa11.08□□□□□ -0.64
CXCL3-201ENST00000296026 GAGE2AQ6NT46 116 aa11.08□□□□□ -0.64
CXCL3-201ENST00000296026 B5MCH6 92 aa11.07□□□□□ -0.64
CXCL3-201ENST00000296026 TSPEAR-AS2P59090 65 aa11.06□□□□□ -0.64
CXCL3-201ENST00000296026 IGLV9-49A0A0B4J1Y8 123 aa11.04□□□□□ -0.64
CXCL3-201ENST00000296026 LOC107984156A0A0G2JMH3 177 aa11.04□□□□□ -0.64
CXCL3-201ENST00000296026 ERC2-IT1O76042 136 aa11.04□□□□□ -0.64
CXCL3-201ENST00000296026 DDTP30046 118 aa11.04□□□□□ -0.64
CXCL3-201ENST00000296026 MOBPQ13875 183 aa11.04□□□□□ -0.64
CXCL3-201ENST00000296026 ARL17AQ8IVW1 177 aa11.04□□□□□ -0.64
CXCL3-201ENST00000296026 LEPROTO15243 131 aa11.03□□□□□ -0.64
CXCL3-201ENST00000296026 TRBV10-2A0A0K0K1G8 114 aa11.02□□□□□ -0.65
CXCL3-201ENST00000296026 ASB16-AS1Q495Z4 193 aa11.02□□□□□ -0.65
CXCL3-201ENST00000296026 LEPROTL1O95214 131 aa11.01□□□□□ -0.65
CXCL3-201ENST00000296026 SSBP3-AS1Q7Z2R9 100 aa11.01□□□□□ -0.65
CXCL3-201ENST00000296026 Q9BRP9 147 aa11.01□□□□□ -0.65
CXCL3-201ENST00000296026 Q6ZRX8 168 aa11□□□□□ -0.65
CXCL3-201ENST00000296026 J3QQQ9 107 aa10.99□□□□□ -0.65
CXCL3-201ENST00000296026 PLNP26678 52 aa10.99□□□□□ -0.65
CXCL3-201ENST00000296026 RPS29P62273 56 aaKnown RBP10.99□□□□□ -0.65
CXCL3-201ENST00000296026 Q8N377 158 aa10.99□□□□□ -0.65
CXCL3-201ENST00000296026 MIEN1Q9BRT3 115 aa10.99□□□□□ -0.65
CXCL3-201ENST00000296026 SPANXB1Q9NS25 103 aaPredicted RBP10.99□□□□□ -0.65
CXCL3-201ENST00000296026 SERF1AO75920 110 aa10.97□□□□□ -0.65
CXCL3-201ENST00000296026 TRGC2P03986 189 aa10.97□□□□□ -0.65
CXCL3-201ENST00000296026 LINC00310P59036 64 aa10.97□□□□□ -0.65
CXCL3-201ENST00000296026 S100A7L2Q5SY68 101 aa10.97□□□□□ -0.65
CXCL3-201ENST00000296026 LGALS3P17931 250 aaKnown RBP10.96□□□□□ -0.65
CXCL3-201ENST00000296026 NMUP48645 174 aa10.96□□□□□ -0.65
CXCL3-201ENST00000296026 SEC61BP60468 96 aaKnown RBP10.96□□□□□ -0.65
CXCL3-201ENST00000296026 HERVK_113P61574 105 aa10.96□□□□□ -0.65
CXCL3-201ENST00000296026 DPM2O94777 84 aa10.95□□□□□ -0.66
CXCL3-201ENST00000296026 NDUFC2O95298 119 aa10.95□□□□□ -0.66
CXCL3-201ENST00000296026 IGLV6-57P01721 117 aa10.95□□□□□ -0.66
CXCL3-201ENST00000296026 PMCHL2Q9BQD1 86 aa10.95□□□□□ -0.66
CXCL3-201ENST00000296026 KRTAP4-1Q9BYQ7 146 aa10.95□□□□□ -0.66
CXCL3-201ENST00000296026 SLC25A20O43772 301 aa10.94□□□□□ -0.66
CXCL3-201ENST00000296026 HSPB8Q9UJY1 196 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms