RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 MEIG1Q5JSS6 88 aa9.9□□□□□ -0.83
CCDC140-201ENST00000295226 C2orf82Q6UX34 121 aa9.9□□□□□ -0.83
CCDC140-201ENST00000295226 Q8N814 137 aa9.9□□□□□ -0.83
CCDC140-201ENST00000295226 HECTD4Q9Y4D8 3996 aa9.89□□□□□ -0.83
CCDC140-201ENST00000295226 DNAH11Q96DT5 4516 aa9.89□□□□□ -0.83
CCDC140-201ENST00000295226 Q1RN00 199 aa9.89□□□□□ -0.83
CCDC140-201ENST00000295226 LINC00308Q8TCZ7 52 aa9.89□□□□□ -0.83
CCDC140-201ENST00000295226 PRO0461Q9UI25 63 aa9.89□□□□□ -0.83
CCDC140-201ENST00000295226 C6orf226Q5I0X4 101 aa9.88□□□□□ -0.83
CCDC140-201ENST00000295226 NTN5Q8WTR8 489 aaPredicted RBP9.88□□□□□ -0.83
CCDC140-201ENST00000295226 EIF4EBP3O60516 100 aaPredicted RBP9.87□□□□□ -0.83
CCDC140-201ENST00000295226 COX6CP09669 75 aa9.87□□□□□ -0.83
CCDC140-201ENST00000295226 C10orf25Q5T742 122 aa9.87□□□□□ -0.83
CCDC140-201ENST00000295226 UNQ6190/PRO20217Q6UXQ8 127 aa9.87□□□□□ -0.83
CCDC140-201ENST00000295226 Q8IZM0 81 aa9.87□□□□□ -0.83
CCDC140-201ENST00000295226 PKD1P98161 4303 aa9.86□□□□□ -0.83
CCDC140-201ENST00000295226 M0QXV9 152 aa9.86□□□□□ -0.83
CCDC140-201ENST00000295226 TCL1BO95988 128 aa9.86□□□□□ -0.83
CCDC140-201ENST00000295226 KRTAP10-2P60368 255 aa9.86□□□□□ -0.83
CCDC140-201ENST00000295226 C14orf177Q52M58 125 aa9.86□□□□□ -0.83
CCDC140-201ENST00000295226 LINC00336Q6ZUF6 198 aa9.86□□□□□ -0.83
CCDC140-201ENST00000295226 ATXN8Q156A1 80 aa9.85□□□□□ -0.83
CCDC140-201ENST00000295226 LINC01620Q4KN68 170 aa9.85□□□□□ -0.83
CCDC140-201ENST00000295226 Q6ZRU5 148 aa9.85□□□□□ -0.83
CCDC140-201ENST00000295226 CAMK2N2Q96S95 79 aa9.85□□□□□ -0.83
CCDC140-201ENST00000295226 CKS1BP61024 79 aa9.84□□□□□ -0.83
CCDC140-201ENST00000295226 H7C2G1 150 aa9.83□□□□□ -0.84
CCDC140-201ENST00000295226 RNF151Q2KHN1 245 aa9.83□□□□□ -0.84
CCDC140-201ENST00000295226 VPS25Q9BRG1 176 aa9.83□□□□□ -0.84
CCDC140-201ENST00000295226 SYCNQ0VAF6 134 aa9.83□□□□□ -0.84
CCDC140-201ENST00000295226 C9orf116Q5BN46 136 aaPredicted RBP9.83□□□□□ -0.84
CCDC140-201ENST00000295226 C2orf48Q96LS8 159 aa9.83□□□□□ -0.84
CCDC140-201ENST00000295226 CXCL5P42830 114 aa9.82□□□□□ -0.84
CCDC140-201ENST00000295226 NPC2P61916 151 aa9.82□□□□□ -0.84
CCDC140-201ENST00000295226 DAND5Q8N907 189 aa9.82□□□□□ -0.84
CCDC140-201ENST00000295226 RPL13AP40429 203 aaKnown RBP9.81□□□□□ -0.84
CCDC140-201ENST00000295226 ETDBQ3ZM63 59 aa9.81□□□□□ -0.84
CCDC140-201ENST00000295226 CARD19Q96LW7 228 aa9.81□□□□□ -0.84
CCDC140-201ENST00000295226 C6orf48Q9UBA6 75 aa9.81□□□□□ -0.84
CCDC140-201ENST00000295226 A0A1B0GVY2 172 aa9.8□□□□□ -0.84
CCDC140-201ENST00000295226 TRIAP1O43715 76 aa9.8□□□□□ -0.84
CCDC140-201ENST00000295226 LINC01600Q96MT4 127 aa9.8□□□□□ -0.84
CCDC140-201ENST00000295226 IGLV5-52A0A0A0MRZ9 124 aa9.8□□□□□ -0.84
CCDC140-201ENST00000295226 TRAV13-2A0A0B4J235 113 aa9.8□□□□□ -0.84
CCDC140-201ENST00000295226 CNBPP62633 177 aaKnown RBP9.8□□□□□ -0.84
CCDC140-201ENST00000295226 SOSTDC1Q6X4U4 206 aa9.79□□□□□ -0.84
CCDC140-201ENST00000295226 TEN1Q86WV5 123 aa9.79□□□□□ -0.84
CCDC140-201ENST00000295226 A0A0U1RRA0 63 aa9.78□□□□□ -0.84
CCDC140-201ENST00000295226 SMCPP49901 116 aaPredicted RBP9.78□□□□□ -0.84
CCDC140-201ENST00000295226 LINC00158P58513 81 aa9.78□□□□□ -0.84
CCDC140-201ENST00000295226 MIR7-3HGQ8N6C7 128 aa9.78□□□□□ -0.84
CCDC140-201ENST00000295226 DNAH5Q8TE73 4624 aa9.77□□□□□ -0.84
CCDC140-201ENST00000295226 SLC25A20O43772 301 aa9.77□□□□□ -0.84
CCDC140-201ENST00000295226 PKHD1P08F94 4074 aa9.77□□□□□ -0.85
CCDC140-201ENST00000295226 PPDPFLQ8WWR9 84 aa9.77□□□□□ -0.85
CCDC140-201ENST00000295226 C9JAW5 83 aa9.76□□□□□ -0.85
CCDC140-201ENST00000295226 F8WDY8 70 aa9.76□□□□□ -0.85
CCDC140-201ENST00000295226 PFN2P35080 140 aa9.76□□□□□ -0.85
CCDC140-201ENST00000295226 COX17Q14061 63 aa9.76□□□□□ -0.85
CCDC140-201ENST00000295226 MTURNQ8N3F0 131 aa9.76□□□□□ -0.85
CCDC140-201ENST00000295226 C9orf163Q8N9P6 203 aa9.76□□□□□ -0.85
CCDC140-201ENST00000295226 TRBV10-2A0A0K0K1G8 114 aa9.75□□□□□ -0.85
CCDC140-201ENST00000295226 SND1-IT1Q9HBX3 110 aa9.75□□□□□ -0.85
CCDC140-201ENST00000295226 LST1O00453 97 aa9.74□□□□□ -0.85
CCDC140-201ENST00000295226 H3BT86 120 aa9.74□□□□□ -0.85
CCDC140-201ENST00000295226 ANKRD29Q8N6D5 301 aa9.74□□□□□ -0.85
CCDC140-201ENST00000295226 SDIM1Q6ZPB5 146 aa9.73□□□□□ -0.85
CCDC140-201ENST00000295226 RPL18AQ02543 176 aaKnown RBP9.72□□□□□ -0.85
CCDC140-201ENST00000295226 Q6ZRP5 223 aa9.72□□□□□ -0.85
CCDC140-201ENST00000295226 CHTF8P0CG12 524 aa9.71□□□□□ -0.85
CCDC140-201ENST00000295226 RPL28P46779 137 aaKnown RBP9.71□□□□□ -0.85
CCDC140-201ENST00000295226 KRTAP10-1P60331 282 aa9.71□□□□□ -0.85
CCDC140-201ENST00000295226 GAGE2BQ13066 116 aa9.71□□□□□ -0.85
CCDC140-201ENST00000295226 GAGE2EQ4V326 116 aa9.71□□□□□ -0.85
CCDC140-201ENST00000295226 GAGE2DQ9UEU5 116 aa9.71□□□□□ -0.85
CCDC140-201ENST00000295226 IGKV2-24A0A0C4DH68 120 aa9.71□□□□□ -0.86
CCDC140-201ENST00000295226 A0A096LNI7 61 aa9.7□□□□□ -0.86
CCDC140-201ENST00000295226 LOC107984640A0A0U1RRK4 108 aa9.7□□□□□ -0.86
CCDC140-201ENST00000295226 C16orf90A8MZG2 172 aa9.7□□□□□ -0.86
CCDC140-201ENST00000295226 PANO1I0J062 215 aa9.7□□□□□ -0.86
CCDC140-201ENST00000295226 NDUFC2-KCTD14E9PQ53 114 aa9.69□□□□□ -0.86
CCDC140-201ENST00000295226 TRACP01848 142 aa9.68□□□□□ -0.86
CCDC140-201ENST00000295226 XAGE1AQ9HD64 81 aa9.68□□□□□ -0.86
CCDC140-201ENST00000295226 IGKV2-28A0A075B6P5 120 aa9.67□□□□□ -0.86
CCDC140-201ENST00000295226 NDUFC2O95298 119 aa9.67□□□□□ -0.86
CCDC140-201ENST00000295226 IGKV2D-28P01615 120 aa9.67□□□□□ -0.86
CCDC140-201ENST00000295226 TLX1NBP0CAT3 122 aa9.67□□□□□ -0.86
CCDC140-201ENST00000295226 FAM30AQ9NZY2 134 aa9.67□□□□□ -0.86
CCDC140-201ENST00000295226 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.67□□□□□ -0.86
CCDC140-201ENST00000295226 DYNC1H1Q14204 4646 aaKnown RBP9.67□□□□□ -0.86
CCDC140-201ENST00000295226 H0YGX0 51 aa9.67□□□□□ -0.86
CCDC140-201ENST00000295226 CLEC2BQ92478 149 aa9.67□□□□□ -0.86
CCDC140-201ENST00000295226 LINC00337Q8N6G1 96 aa9.66□□□□□ -0.86
CCDC140-201ENST00000295226 LRP1BQ9NZR2 4599 aa9.65□□□□□ -0.86
CCDC140-201ENST00000295226 C9orf129Q5T035 196 aaKnown RBP9.65□□□□□ -0.86
CCDC140-201ENST00000295226 EPPK1P58107 5090 aaKnown RBP9.65□□□□□ -0.86
CCDC140-201ENST00000295226 HAMPP81172 84 aa9.64□□□□□ -0.87
CCDC140-201ENST00000295226 DPH3Q96FX2 82 aa9.64□□□□□ -0.87
CCDC140-201ENST00000295226 FAM168BA1KXE4 195 aa9.64□□□□□ -0.87
CCDC140-201ENST00000295226 DNAH8Q96JB1 4490 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms