RNA–Protein interactions for RNA: ENST00000290399.10

SIM2-201, Transcript of SIM bHLH transcription factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM2, Length 4,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM2-201ENST00000290399 DMXL2Q8TDJ6 3036 aa12.63□□□□□ -0.39
SIM2-201ENST00000290399 C2orf48Q96LS8 159 aa12.6□□□□□ -0.39
SIM2-201ENST00000290399 LITAFQ99732 161 aa12.6□□□□□ -0.39
SIM2-201ENST00000290399 COX7CP15954 63 aa12.6□□□□□ -0.39
SIM2-201ENST00000290399 LINC00575Q6W349 94 aa12.6□□□□□ -0.39
SIM2-201ENST00000290399 ZNF575Q86XF7 245 aa12.59□□□□□ -0.39
SIM2-201ENST00000290399 SBSPONQ8IVN8 264 aa12.59□□□□□ -0.39
SIM2-201ENST00000290399 ESRGQ1W209 222 aa12.59□□□□□ -0.39
SIM2-201ENST00000290399 KALRNO60229 2985 aa12.58□□□□□ -0.4
SIM2-201ENST00000290399 C10orf25Q5T742 122 aa12.58□□□□□ -0.4
SIM2-201ENST00000290399 FAM218AQ96MZ4 157 aa12.58□□□□□ -0.4
SIM2-201ENST00000290399 LINC00846Q9NV44 126 aa12.58□□□□□ -0.4
SIM2-201ENST00000290399 Q8NAQ8 132 aa12.57□□□□□ -0.4
SIM2-201ENST00000290399 CSNK1G2-AS1Q8NCQ2 148 aa12.57□□□□□ -0.4
SIM2-201ENST00000290399 TEX15Q9BXT5 2789 aa12.57□□□□□ -0.4
SIM2-201ENST00000290399 KRTAP24-1Q3LI83 254 aa12.55□□□□□ -0.4
SIM2-201ENST00000290399 GIG44P09565 113 aaPredicted RBP12.55□□□□□ -0.4
SIM2-201ENST00000290399 COL12A1Q99715 3063 aa12.55□□□□□ -0.4
SIM2-201ENST00000290399 EIF4EBP3O60516 100 aaPredicted RBP12.54□□□□□ -0.4
SIM2-201ENST00000290399 LRCOL1A6NCL2 159 aa12.54□□□□□ -0.4
SIM2-201ENST00000290399 SNURFQ9Y675 71 aa12.54□□□□□ -0.4
SIM2-201ENST00000290399 C4orf48Q5BLP8 95 aa12.53□□□□□ -0.4
SIM2-201ENST00000290399 C19orf73Q9NVV2 129 aa12.53□□□□□ -0.4
SIM2-201ENST00000290399 C6orf48Q9UBA6 75 aa12.53□□□□□ -0.4
SIM2-201ENST00000290399 C1orf137Q5JT78 98 aa12.52□□□□□ -0.4
SIM2-201ENST00000290399 KRTAP1-3Q8IUG1 177 aa12.52□□□□□ -0.41
SIM2-201ENST00000290399 FAM236DA0A1B0GTK5 79 aa12.51□□□□□ -0.41
SIM2-201ENST00000290399 FAM236CP0DP71 79 aa12.51□□□□□ -0.41
SIM2-201ENST00000290399 LINC01556Q5JQF7 62 aa12.51□□□□□ -0.41
SIM2-201ENST00000290399 PLAC8L1A1L4L8 177 aa12.51□□□□□ -0.41
SIM2-201ENST00000290399 WFDC13Q8IUB5 93 aa12.51□□□□□ -0.41
SIM2-201ENST00000290399 FAM19A3Q7Z5A8 133 aa12.5□□□□□ -0.41
SIM2-201ENST00000290399 UNC79Q9P2D8 2635 aa12.5□□□□□ -0.41
SIM2-201ENST00000290399 GCN1Q92616 2671 aaKnown RBP12.49□□□□□ -0.41
SIM2-201ENST00000290399 REG3GQ6UW15 175 aa12.49□□□□□ -0.41
SIM2-201ENST00000290399 ZZEF1O43149 2961 aa12.49□□□□□ -0.41
SIM2-201ENST00000290399 LY6G6CO95867 125 aa12.48□□□□□ -0.41
SIM2-201ENST00000290399 SPTBN5Q9NRC6 3674 aaKnown RBP12.48□□□□□ -0.41
SIM2-201ENST00000290399 F8WDY8 70 aa12.48□□□□□ -0.41
SIM2-201ENST00000290399 MRPL55Q7Z7F7 128 aaKnown RBP12.48□□□□□ -0.41
SIM2-201ENST00000290399 CFAP47Q6ZTR5 3102 aa12.47□□□□□ -0.41
SIM2-201ENST00000290399 NUPR2A6NF83 97 aa12.46□□□□□ -0.41
SIM2-201ENST00000290399 LINC00474Q9P2X8 69 aa12.46□□□□□ -0.41
SIM2-201ENST00000290399 TACC2O95359 2948 aa12.45□□□□□ -0.42
SIM2-201ENST00000290399 STAB1Q9NY15 2570 aa12.45□□□□□ -0.42
SIM2-201ENST00000290399 IGLV9-49A0A0B4J1Y8 123 aa12.45□□□□□ -0.42
SIM2-201ENST00000290399 H3BNG1 76 aa12.45□□□□□ -0.42
SIM2-201ENST00000290399 Q6ZVQ6 151 aa12.44□□□□□ -0.42
SIM2-201ENST00000290399 IGKV4-1P06312 121 aa12.44□□□□□ -0.42
SIM2-201ENST00000290399 HRCT1Q6UXD1 115 aa12.44□□□□□ -0.42
SIM2-201ENST00000290399 UBR5O95071 2799 aaPredicted RBP12.44□□□□□ -0.42
SIM2-201ENST00000290399 NOTCH1P46531 2555 aa12.44□□□□□ -0.42
SIM2-201ENST00000290399 KRTAP10-3P60369 221 aa12.43□□□□□ -0.42
SIM2-201ENST00000290399 C5orf47Q569G3 176 aa12.43□□□□□ -0.42
SIM2-201ENST00000290399 SPINK6Q6UWN8 80 aa12.43□□□□□ -0.42
SIM2-201ENST00000290399 TNRC18O15417 2968 aaPredicted RBP12.42□□□□□ -0.42
SIM2-201ENST00000290399 TRBV7-7A0A0K0K1E9 115 aa12.42□□□□□ -0.42
SIM2-201ENST00000290399 C7orf33Q8WU49 177 aa12.42□□□□□ -0.42
SIM2-201ENST00000290399 C22orf24Q9Y442 160 aa12.42□□□□□ -0.42
SIM2-201ENST00000290399 COL6A5A8TX70 2615 aa12.42□□□□□ -0.42
SIM2-201ENST00000290399 LRBAP50851 2863 aa12.41□□□□□ -0.42
SIM2-201ENST00000290399 PRYO14603 147 aa12.41□□□□□ -0.42
SIM2-201ENST00000290399 KRTAP1-1Q07627 177 aa12.4□□□□□ -0.42
SIM2-201ENST00000290399 TRAV7A0A075B6U4 112 aa12.39□□□□□ -0.43
SIM2-201ENST00000290399 PRLHP81277 87 aa12.39□□□□□ -0.43
SIM2-201ENST00000290399 NBEAL2Q6ZNJ1 2754 aa12.38□□□□□ -0.43
SIM2-201ENST00000290399 FAM30AQ9NZY2 134 aa12.38□□□□□ -0.43
SIM2-201ENST00000290399 LINC01547P58512 204 aaPredicted RBP12.37□□□□□ -0.43
SIM2-201ENST00000290399 ITPR1Q14643 2758 aa12.37□□□□□ -0.43
SIM2-201ENST00000290399 DMXL1Q9Y485 3027 aa12.37□□□□□ -0.43
SIM2-201ENST00000290399 NDUFC1O43677 76 aa12.37□□□□□ -0.43
SIM2-201ENST00000290399 PRR4Q16378 134 aa12.37□□□□□ -0.43
SIM2-201ENST00000290399 ZNF706Q9Y5V0 76 aaPredicted RBP12.36□□□□□ -0.43
SIM2-201ENST00000290399 SETXQ7Z333 2677 aaKnown RBP12.36□□□□□ -0.43
SIM2-201ENST00000290399 MPLKIPQ8TAP9 179 aa12.36□□□□□ -0.43
SIM2-201ENST00000290399 LINC00167Q96N53 147 aa12.36□□□□□ -0.43
SIM2-201ENST00000290399 A0A087WSZ3 146 aa12.35□□□□□ -0.43
SIM2-201ENST00000290399 CHKB-CPT1BH3BT56 60 aa12.35□□□□□ -0.43
SIM2-201ENST00000290399 SPATA3Q8NHX4 192 aa12.35□□□□□ -0.43
SIM2-201ENST00000290399 LOC400499M0QZD8 3231 aa12.35□□□□□ -0.43
SIM2-201ENST00000290399 Q9BRP9 147 aa12.34□□□□□ -0.43
SIM2-201ENST00000290399 KIAA0087Q14695 138 aa12.34□□□□□ -0.43
SIM2-201ENST00000290399 Q8N9L7 120 aa12.32□□□□□ -0.44
SIM2-201ENST00000290399 LINC00588Q9Y4M8 146 aa12.32□□□□□ -0.44
SIM2-201ENST00000290399 MYO15AQ9UKN7 3530 aa12.32□□□□□ -0.44
SIM2-201ENST00000290399 LINC00612Q8N6U2 182 aa12.32□□□□□ -0.44
SIM2-201ENST00000290399 DEFB116Q30KQ4 102 aa12.31□□□□□ -0.44
SIM2-201ENST00000290399 ELOF1P60002 83 aaKnown RBP12.3□□□□□ -0.44
SIM2-201ENST00000290399 SMCR5Q8TEV8 140 aa12.28□□□□□ -0.44
SIM2-201ENST00000290399 GVQW2A0A096LPI5 108 aaPredicted RBP12.28□□□□□ -0.44
SIM2-201ENST00000290399 Q6ZRP5 223 aa12.27□□□□□ -0.44
SIM2-201ENST00000290399 KRTAP10-11P60412 298 aa12.27□□□□□ -0.45
SIM2-201ENST00000290399 CR1P17927 2039 aa12.27□□□□□ -0.45
SIM2-201ENST00000290399 IGLV5-52A0A0A0MRZ9 124 aa12.26□□□□□ -0.45
SIM2-201ENST00000290399 PRR34Q9NV39 138 aa12.26□□□□□ -0.45
SIM2-201ENST00000290399 BRK1Q8WUW1 75 aa12.26□□□□□ -0.45
SIM2-201ENST00000290399 MDFIQ99750 246 aa12.26□□□□□ -0.45
SIM2-201ENST00000290399 VPREB1P12018 145 aa12.25□□□□□ -0.45
SIM2-201ENST00000290399 TRBV7-6A0A0J9YX20 115 aa12.24□□□□□ -0.45
SIM2-201ENST00000290399 Q6ZQT0 140 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms