RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 ESRGQ1W209 222 aa5.31□□□□□ -1.56
TRIM42-201ENST00000286349 TRAV7A0A075B6U4 112 aa5.3□□□□□ -1.56
TRIM42-201ENST00000286349 KRTAP10-11P60412 298 aa5.3□□□□□ -1.56
TRIM42-201ENST00000286349 IGLV5-45A0A087WSX0 123 aa5.3□□□□□ -1.56
TRIM42-201ENST00000286349 TSPEAR-AS2P59090 65 aa5.3□□□□□ -1.56
TRIM42-201ENST00000286349 S100A7L2Q5SY68 101 aa5.3□□□□□ -1.56
TRIM42-201ENST00000286349 LINC00612Q8N6U2 182 aa5.3□□□□□ -1.56
TRIM42-201ENST00000286349 IGHV3-30-3P0DP02 117 aa5.29□□□□□ -1.56
TRIM42-201ENST00000286349 NBEAL1Q6ZS30 2694 aa5.29□□□□□ -1.56
TRIM42-201ENST00000286349 PRSS2P07478 247 aa5.29□□□□□ -1.56
TRIM42-201ENST00000286349 Q1RN00 199 aa5.29□□□□□ -1.56
TRIM42-201ENST00000286349 H7C2G1 150 aa5.28□□□□□ -1.56
TRIM42-201ENST00000286349 ATP5EP2Q5VTU8 51 aa5.28□□□□□ -1.56
TRIM42-201ENST00000286349 MGAM2Q2M2H8 2515 aa5.28□□□□□ -1.56
TRIM42-201ENST00000286349 F8WEM9 126 aa5.28□□□□□ -1.56
TRIM42-201ENST00000286349 TRIAP1O43715 76 aa5.28□□□□□ -1.56
TRIM42-201ENST00000286349 NTM-AS1Q6ZSK4 140 aa5.28□□□□□ -1.56
TRIM42-201ENST00000286349 C7orf65Q6ZTY9 151 aa5.28□□□□□ -1.56
TRIM42-201ENST00000286349 EGFEM1PQ0D2K5 195 aa5.27□□□□□ -1.57
TRIM42-201ENST00000286349 SOSTDC1Q6X4U4 206 aa5.27□□□□□ -1.57
TRIM42-201ENST00000286349 CDC42SE2Q9NRR3 84 aa5.27□□□□□ -1.57
TRIM42-201ENST00000286349 X6R8D5 127 aa5.27□□□□□ -1.57
TRIM42-201ENST00000286349 TRAV8-3A0A0A6YYJ7 113 aa5.27□□□□□ -1.57
TRIM42-201ENST00000286349 A0A0J9YXY3 114 aa5.27□□□□□ -1.57
TRIM42-201ENST00000286349 EIF4EBP3O60516 100 aaPredicted RBP5.27□□□□□ -1.57
TRIM42-201ENST00000286349 RNASE13Q5GAN3 156 aaKnown RBP5.27□□□□□ -1.57
TRIM42-201ENST00000286349 DIRC1Q969H9 104 aa5.27□□□□□ -1.57
TRIM42-201ENST00000286349 NDUFA12Q9UI09 145 aa5.27□□□□□ -1.57
TRIM42-201ENST00000286349 IGHV3-64A0A075B6Q5 118 aa5.26□□□□□ -1.57
TRIM42-201ENST00000286349 TRBV6-8A0A0A6YYG3 113 aa5.26□□□□□ -1.57
TRIM42-201ENST00000286349 FUSP35637 526 aaKnown RBP eCLIP5.26□□□□□ -1.57
TRIM42-201ENST00000286349 FAM229BQ4G0N7 80 aa5.26□□□□□ -1.57
TRIM42-201ENST00000286349 MUSTN1Q8IVN3 82 aa5.26□□□□□ -1.57
TRIM42-201ENST00000286349 LINC00242Q5T6M2 205 aa5.26□□□□□ -1.57
TRIM42-201ENST00000286349 KPRPQ5T749 579 aaPredicted RBP5.26□□□□□ -1.57
TRIM42-201ENST00000286349 NKAPP1Q8N9T2 125 aa5.26□□□□□ -1.57
TRIM42-201ENST00000286349 PRO0255Q9UI72 69 aa5.26□□□□□ -1.57
TRIM42-201ENST00000286349 ICOSQ9Y6W8 199 aa5.26□□□□□ -1.57
TRIM42-201ENST00000286349 IGLV5-39A0A0G2JS06 123 aa5.25□□□□□ -1.57
TRIM42-201ENST00000286349 TRBV10-3A0A0K0K1G6 114 aa5.25□□□□□ -1.57
TRIM42-201ENST00000286349 NDUFA1O15239 70 aa5.25□□□□□ -1.57
TRIM42-201ENST00000286349 PRB2P02812 416 aaPredicted RBP5.25□□□□□ -1.57
TRIM42-201ENST00000286349 DEFB130BP0DP73 79 aa5.25□□□□□ -1.57
TRIM42-201ENST00000286349 DEFB130AP0DP74 79 aa5.25□□□□□ -1.57
TRIM42-201ENST00000286349 MIFP14174 115 aa5.25□□□□□ -1.57
TRIM42-201ENST00000286349 ATP11AUNQ6ZP68 121 aa5.25□□□□□ -1.57
TRIM42-201ENST00000286349 CDKN2A-AS1Q9UH64 79 aa5.25□□□□□ -1.57
TRIM42-201ENST00000286349 A0A087WVE0 104 aa5.25□□□□□ -1.57
TRIM42-201ENST00000286349 COX7A2LO14548 114 aa5.25□□□□□ -1.57
TRIM42-201ENST00000286349 IGKV3D-7A0A0C4DH55 119 aa5.24□□□□□ -1.57
TRIM42-201ENST00000286349 LOC100131303A0A0U1RQF7 123 aa5.24□□□□□ -1.57
TRIM42-201ENST00000286349 MIAQ16674 131 aa5.24□□□□□ -1.57
TRIM42-201ENST00000286349 A6NN06 94 aa5.23□□□□□ -1.57
TRIM42-201ENST00000286349 GYPEP15421 78 aa5.23□□□□□ -1.57
TRIM42-201ENST00000286349 UBE2AP49459 152 aa5.23□□□□□ -1.57
TRIM42-201ENST00000286349 MP68P56378 58 aa5.23□□□□□ -1.57
TRIM42-201ENST00000286349 CXCL6P80162 114 aa5.23□□□□□ -1.57
TRIM42-201ENST00000286349 LITAFQ99732 161 aa5.23□□□□□ -1.57
TRIM42-201ENST00000286349 MEGF8Q7Z7M0 2845 aa5.23□□□□□ -1.57
TRIM42-201ENST00000286349 LINC00313P59037 77 aa5.23□□□□□ -1.57
TRIM42-201ENST00000286349 COX6A2Q02221 97 aa5.23□□□□□ -1.57
TRIM42-201ENST00000286349 DEFB135Q30KP9 77 aa5.23□□□□□ -1.57
TRIM42-201ENST00000286349 A0A1B0GUV1 79 aa5.22□□□□□ -1.57
TRIM42-201ENST00000286349 SMIM1B2RUZ4 78 aa5.22□□□□□ -1.57
TRIM42-201ENST00000286349 IGHV4-28A0A0C4DH34 117 aa5.22□□□□□ -1.57
TRIM42-201ENST00000286349 SPART-AS1P0CW21 52 aa5.22□□□□□ -1.57
TRIM42-201ENST00000286349 H0Y9J4 135 aa5.21□□□□□ -1.58
TRIM42-201ENST00000286349 K7EIL1 84 aa5.21□□□□□ -1.58
TRIM42-201ENST00000286349 LINC00337Q8N6G1 96 aa5.21□□□□□ -1.58
TRIM42-201ENST00000286349 IGHV4-30-4P0DP06 118 aa5.21□□□□□ -1.58
TRIM42-201ENST00000286349 Q8NAQ8 132 aa5.21□□□□□ -1.58
TRIM42-201ENST00000286349 RMI2Q96E14 147 aa5.21□□□□□ -1.58
TRIM42-201ENST00000286349 A0A087WZ39 114 aa5.2□□□□□ -1.58
TRIM42-201ENST00000286349 DNAL4O96015 105 aa5.2□□□□□ -1.58
TRIM42-201ENST00000286349 RPL28P46779 137 aaKnown RBP5.2□□□□□ -1.58
TRIM42-201ENST00000286349 DNAH9Q9NYC9 4486 aa5.2□□□□□ -1.58
TRIM42-201ENST00000286349 CLEC2BQ92478 149 aa5.2□□□□□ -1.58
TRIM42-201ENST00000286349 ZNF625Q96I27 306 aaPredicted RBP5.2□□□□□ -1.58
TRIM42-201ENST00000286349 IGLV4-60A0A075B6I1 120 aa5.19□□□□□ -1.58
TRIM42-201ENST00000286349 SYCNQ0VAF6 134 aa5.19□□□□□ -1.58
TRIM42-201ENST00000286349 ADAMTSL4-AS1Q5T5F5 129 aa5.19□□□□□ -1.58
TRIM42-201ENST00000286349 PRKDCP78527 4128 aaKnown RBP5.19□□□□□ -1.58
TRIM42-201ENST00000286349 TENM3Q9P273 2699 aa5.19□□□□□ -1.58
TRIM42-201ENST00000286349 KIAA0087Q14695 138 aa5.19□□□□□ -1.58
TRIM42-201ENST00000286349 LINC01554Q52M75 96 aa5.19□□□□□ -1.58
TRIM42-201ENST00000286349 LINC00269Q8N2A0 174 aa5.19□□□□□ -1.58
TRIM42-201ENST00000286349 COX7B2Q8TF08 81 aa5.19□□□□□ -1.58
TRIM42-201ENST00000286349 TRAV23DV6A0A075B6W5 121 aa5.18□□□□□ -1.58
TRIM42-201ENST00000286349 IGHV3OR16-9A0A0B4J2B5 98 aa5.18□□□□□ -1.58
TRIM42-201ENST00000286349 LINC00959A0A1B0GUT2 108 aa5.18□□□□□ -1.58
TRIM42-201ENST00000286349 ERC2-IT1O76042 136 aa5.18□□□□□ -1.58
TRIM42-201ENST00000286349 HUWE1Q7Z6Z7 4374 aaKnown RBP5.18□□□□□ -1.58
TRIM42-201ENST00000286349 Q6ZRP5 223 aa5.18□□□□□ -1.58
TRIM42-201ENST00000286349 LINC00308Q8TCZ7 52 aa5.17□□□□□ -1.58
TRIM42-201ENST00000286349 SNURFQ9Y675 71 aa5.17□□□□□ -1.58
TRIM42-201ENST00000286349 IGKV3OR2-268A0A0C4DH90 116 aa5.16□□□□□ -1.58
TRIM42-201ENST00000286349 H3BNG1 76 aa5.16□□□□□ -1.58
TRIM42-201ENST00000286349 LINC00846Q9NV44 126 aa5.16□□□□□ -1.58
TRIM42-201ENST00000286349 hDV103S1A0JD37 113 aa5.16□□□□□ -1.58
TRIM42-201ENST00000286349 DEFB4AO15263 64 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms