RNA–Protein interactions for RNA: ENST00000282641.6

A1CF-201, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene A1CF, Length 9,350 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-201ENST00000282641 C16orf95Q9H693 158 aa5.97□□□□□ -1.45
A1CF-201ENST00000282641 C11orf71Q6IPW1 123 aa5.97□□□□□ -1.45
A1CF-201ENST00000282641 CYSRT1A8MQ03 144 aa5.97□□□□□ -1.45
A1CF-201ENST00000282641 LMO4P61968 165 aa5.97□□□□□ -1.45
A1CF-201ENST00000282641 LINC00528Q8N1L1 170 aa5.97□□□□□ -1.45
A1CF-201ENST00000282641 A0A1B0GU69 56 aa5.96□□□□□ -1.45
A1CF-201ENST00000282641 DMAC1Q96GE9 116 aa5.96□□□□□ -1.46
A1CF-201ENST00000282641 SPRR4Q96PI1 79 aa5.96□□□□□ -1.46
A1CF-201ENST00000282641 C22orf24Q9Y442 160 aa5.96□□□□□ -1.46
A1CF-201ENST00000282641 GRNP28799 593 aaKnown RBP5.96□□□□□ -1.46
A1CF-201ENST00000282641 Q8NA96 180 aa5.96□□□□□ -1.46
A1CF-201ENST00000282641 FAM229AH3BQW9 127 aa5.95□□□□□ -1.46
A1CF-201ENST00000282641 WFDC10BQ8IUB3 73 aa5.95□□□□□ -1.46
A1CF-201ENST00000282641 ADORA2A-AS1P86434 159 aa5.95□□□□□ -1.46
A1CF-201ENST00000282641 IL17DQ8TAD2 202 aa5.94□□□□□ -1.46
A1CF-201ENST00000282641 REG3GQ6UW15 175 aa5.94□□□□□ -1.46
A1CF-201ENST00000282641 LYNX1G3V0Z9 82 aa5.94□□□□□ -1.46
A1CF-201ENST00000282641 LYNX1P0DP58 116 aa5.94□□□□□ -1.46
A1CF-201ENST00000282641 C6orf48Q9UBA6 75 aa5.94□□□□□ -1.46
A1CF-201ENST00000282641 IGLV7-46A0A075B6I9 117 aa5.93□□□□□ -1.46
A1CF-201ENST00000282641 ATP1A1-AS1Q5TC04 95 aa5.93□□□□□ -1.46
A1CF-201ENST00000282641 WFDC13Q8IUB5 93 aa5.93□□□□□ -1.46
A1CF-201ENST00000282641 COX6A2Q02221 97 aa5.93□□□□□ -1.46
A1CF-201ENST00000282641 RUSC1-AS1Q66K80 236 aa5.93□□□□□ -1.46
A1CF-201ENST00000282641 DNAJC9-AS1A6NH13 148 aa5.92□□□□□ -1.46
A1CF-201ENST00000282641 Q8N9P0 234 aaPredicted RBP5.92□□□□□ -1.46
A1CF-201ENST00000282641 BRD3OSQ6XYD6 125 aa5.92□□□□□ -1.46
A1CF-201ENST00000282641 IGKV2D-24A0A075B6R9 120 aa5.9□□□□□ -1.47
A1CF-201ENST00000282641 Q6YL49 198 aa5.9□□□□□ -1.47
A1CF-201ENST00000282641 ZFHX2Q9C0A1 2572 aaPredicted RBP5.9□□□□□ -1.47
A1CF-201ENST00000282641 IGLV5-37A0A075B6J1 123 aa5.9□□□□□ -1.47
A1CF-201ENST00000282641 TMEM105Q8N8V8 129 aa5.9□□□□□ -1.47
A1CF-201ENST00000282641 TLX1NBP0CAT3 122 aa5.89□□□□□ -1.47
A1CF-201ENST00000282641 KLK12Q9UKR0 248 aa5.88□□□□□ -1.47
A1CF-201ENST00000282641 LINC00612Q8N6U2 182 aa5.88□□□□□ -1.47
A1CF-201ENST00000282641 Q5VV11 94 aa5.88□□□□□ -1.47
A1CF-201ENST00000282641 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.88□□□□□ -1.47
A1CF-201ENST00000282641 DEFB105AQ8NG35 78 aa5.88□□□□□ -1.47
A1CF-201ENST00000282641 FAM104AQ969W3 186 aa5.87□□□□□ -1.47
A1CF-201ENST00000282641 H3BS24 57 aa5.87□□□□□ -1.47
A1CF-201ENST00000282641 ZCCHC13Q8WW36 166 aaKnown RBP5.87□□□□□ -1.47
A1CF-201ENST00000282641 IGLV8-61A0A075B6I0 122 aa5.87□□□□□ -1.47
A1CF-201ENST00000282641 BBC3Q96PG8 261 aaPredicted RBP5.86□□□□□ -1.47
A1CF-201ENST00000282641 EPG5Q9HCE0 2579 aa5.86□□□□□ -1.47
A1CF-201ENST00000282641 SLURP1P55000 103 aa5.86□□□□□ -1.47
A1CF-201ENST00000282641 IGLV4-60A0A075B6I1 120 aa5.85□□□□□ -1.47
A1CF-201ENST00000282641 IGLV10-54A0A075B6I4 117 aa5.85□□□□□ -1.47
A1CF-201ENST00000282641 MIR22HGQ0VDD5 57 aa5.85□□□□□ -1.47
A1CF-201ENST00000282641 Q8NAQ8 132 aa5.85□□□□□ -1.47
A1CF-201ENST00000282641 ODF3L2Q3SX64 289 aa5.85□□□□□ -1.47
A1CF-201ENST00000282641 IGLV1-51P01701 117 aa5.84□□□□□ -1.47
A1CF-201ENST00000282641 ZNF575Q86XF7 245 aa5.84□□□□□ -1.47
A1CF-201ENST00000282641 OXTP01178 125 aa5.84□□□□□ -1.47
A1CF-201ENST00000282641 PRR34Q9NV39 138 aa5.84□□□□□ -1.47
A1CF-201ENST00000282641 UNQ6190/PRO20217Q6UXQ8 127 aa5.84□□□□□ -1.48
A1CF-201ENST00000282641 A6NN06 94 aa5.83□□□□□ -1.48
A1CF-201ENST00000282641 DEFB123Q8N688 67 aa5.82□□□□□ -1.48
A1CF-201ENST00000282641 A0A087WSZ3 146 aa5.82□□□□□ -1.48
A1CF-201ENST00000282641 LINC01006Q8NI28 216 aa5.82□□□□□ -1.48
A1CF-201ENST00000282641 PLA2G5P39877 138 aa5.82□□□□□ -1.48
A1CF-201ENST00000282641 LINC01556Q5JQF7 62 aa5.82□□□□□ -1.48
A1CF-201ENST00000282641 CENPEQ02224 2701 aa5.82□□□□□ -1.48
A1CF-201ENST00000282641 HTN3P15516 51 aa5.82□□□□□ -1.48
A1CF-201ENST00000282641 PRR4Q16378 134 aa5.81□□□□□ -1.48
A1CF-201ENST00000282641 DEFB113Q30KQ7 82 aa5.81□□□□□ -1.48
A1CF-201ENST00000282641 UBE2DNLQ8IWF7 75 aa5.8□□□□□ -1.48
A1CF-201ENST00000282641 DEFB104AQ8WTQ1 72 aa5.8□□□□□ -1.48
A1CF-201ENST00000282641 CLPSL2Q6UWE3 100 aa5.8□□□□□ -1.48
A1CF-201ENST00000282641 PRRC2CQ9Y520 2896 aaKnown RBP5.8□□□□□ -1.48
A1CF-201ENST00000282641 C15orf56Q8N910 161 aa5.8□□□□□ -1.48
A1CF-201ENST00000282641 C7orf33Q8WU49 177 aa5.8□□□□□ -1.48
A1CF-201ENST00000282641 PLA2G1BP04054 148 aaKnown RBP5.8□□□□□ -1.48
A1CF-201ENST00000282641 C16orf90A8MZG2 172 aa5.79□□□□□ -1.48
A1CF-201ENST00000282641 PRB3Q04118 309 aaPredicted RBP5.79□□□□□ -1.48
A1CF-201ENST00000282641 X6R8D5 127 aa5.79□□□□□ -1.48
A1CF-201ENST00000282641 IGHV6-1A0A0B4J1U7 121 aa5.77□□□□□ -1.49
A1CF-201ENST00000282641 GCN1Q92616 2671 aaKnown RBP5.77□□□□□ -1.49
A1CF-201ENST00000282641 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.77□□□□□ -1.49
A1CF-201ENST00000282641 TNP2Q05952 138 aa5.76□□□□□ -1.49
A1CF-201ENST00000282641 K7EQZ3 153 aa5.76□□□□□ -1.49
A1CF-201ENST00000282641 PROK1P58294 105 aa5.75□□□□□ -1.49
A1CF-201ENST00000282641 LINC00476Q8WZB0 136 aa5.75□□□□□ -1.49
A1CF-201ENST00000282641 PRB4P10163 310 aaPredicted RBP5.75□□□□□ -1.49
A1CF-201ENST00000282641 CR1P17927 2039 aa5.75□□□□□ -1.49
A1CF-201ENST00000282641 HELZ2Q9BYK8 2649 aaKnown RBP5.75□□□□□ -1.49
A1CF-201ENST00000282641 Q6ZSN1 163 aa5.74□□□□□ -1.49
A1CF-201ENST00000282641 LRCOL1A6NCL2 159 aa5.74□□□□□ -1.49
A1CF-201ENST00000282641 CHTF8P0CG12 524 aa5.74□□□□□ -1.49
A1CF-201ENST00000282641 DEFB1P60022 68 aa5.73□□□□□ -1.49
A1CF-201ENST00000282641 CYSTM1Q9H1C7 97 aa5.73□□□□□ -1.49
A1CF-201ENST00000282641 MRPL34Q9BQ48 92 aaKnown RBP5.73□□□□□ -1.49
A1CF-201ENST00000282641 INAFM1C9JVW0 142 aa5.73□□□□□ -1.49
A1CF-201ENST00000282641 A0A1B0GVX0 72 aa5.73□□□□□ -1.49
A1CF-201ENST00000282641 CNBPP62633 177 aaKnown RBP5.72□□□□□ -1.49
A1CF-201ENST00000282641 LINC00313P59037 77 aa5.72□□□□□ -1.49
A1CF-201ENST00000282641 SPRR1BP22528 89 aa5.71□□□□□ -1.49
A1CF-201ENST00000282641 SPATA8Q6RVD6 105 aa5.7□□□□□ -1.5
A1CF-201ENST00000282641 Q6ZR54 194 aa5.7□□□□□ -1.5
A1CF-201ENST00000282641 FSHBP01225 129 aa5.7□□□□□ -1.5
A1CF-201ENST00000282641 UNC79Q9P2D8 2635 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms